Protein

View in Explore
Genbank accession
ATN93650.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MTAVFNSGKTYSGALAGINIGTAILDPQSLFTDYKNRVTADGGYIVDEAATLDEINFIVNNGMWDRVSAWAGANFGVKIRSGTTTQVDKIYGLSGSPDFSAVAVAPTGAPVISLITGTPNKLAITLVNGGVYLKSTVSSKAQAASGVPFLISARLEDRVNTDQLGMTISFADSTTNKALARQRTILTNAGALNEAWQFFASNVNPPVSGSDVSSGAQSPYVAFDKCAALIDPSSGTVAGYGGGVALHTGTSSSGVLADLSHTTGFWHLGPADSSTPTGQSCYGYLANIRCLNVASVLDAQLISNRN
Physico‐chemical
properties
protein length:306 AA
molecular weight: 31560,90420 Da
isoelectric point:5,54285
aromaticity:0,07843
hydropathy:0,09739

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage VW-6B
[NCBI] 		2041486 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa HIM-6
[NCBI] 		29322 Bacillota > Clostridia > Eubacteriales > Eubacteriaceae > Eubacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93650.1 [NCBI]
Genbank nucleotide accession
MF975721 [NCBI]
CDS location
range 34281 -> 35201
strand +
CDS
ATGACTGCCGTATTCAACTCAGGAAAGACCTACTCTGGCGCGTTAGCGGGGATTAATATAGGTACAGCAATATTAGACCCGCAATCGCTATTCACGGACTACAAAAACAGGGTGACCGCAGATGGCGGCTACATCGTTGATGAGGCCGCGACGCTCGACGAAATAAATTTCATTGTCAATAACGGTATGTGGGATAGGGTCTCGGCCTGGGCTGGTGCCAACTTTGGTGTCAAAATTCGAAGTGGCACAACAACCCAGGTTGATAAGATTTACGGACTGTCCGGCTCGCCTGATTTTTCCGCTGTGGCTGTTGCACCTACCGGCGCACCGGTGATATCGCTGATCACAGGCACGCCCAATAAGTTGGCAATAACGCTGGTCAACGGCGGCGTTTACTTGAAATCAACCGTCTCATCGAAGGCACAAGCAGCATCAGGTGTGCCGTTTTTAATTAGCGCAAGGCTCGAAGACAGGGTCAATACCGACCAGTTGGGGATGACGATTTCATTCGCTGATAGCACGACAAATAAAGCTCTGGCACGTCAGCGCACGATACTGACTAACGCCGGTGCATTGAACGAAGCATGGCAGTTTTTTGCGTCAAATGTGAACCCGCCTGTGTCCGGTTCAGATGTGTCCAGCGGCGCTCAATCACCGTATGTGGCATTTGATAAGTGCGCCGCCCTGATTGACCCCTCATCAGGTACTGTCGCGGGTTATGGTGGCGGTGTAGCGTTGCATACGGGTACATCATCGAGCGGCGTACTGGCAGATTTAAGTCACACAACCGGATTCTGGCATTTAGGCCCTGCAGACTCATCAACCCCAACAGGTCAAAGTTGCTATGGGTATCTCGCCAACATACGTTGTCTGAATGTCGCAAGCGTATTAGACGCTCAGCTGATTTCTAATCGCAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0cbf035912361db22d79988ecce5d99156c574567c13e30646658a49c7108a7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7262
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the cold-active bacteriophageVW-6S and VW-6B from Pseudomonas fluorescens Ji,X., Li,J., Wei,Y., Zhang,Q. and Lin,L. 2020-05 — GenBank