Protein

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Genbank accession
XQM40316.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSKLTRVTDWMVTFKSRCSGSVGRLLSEKMEESLTVRDFGAHLNGIDHDDDAIMKMAEAVGYVEIPAGTNAVIGGELFLPVGLSYFGTTYGGRCKITLLPGAKLRETGGISAGTVSVTASAGDTSINSDTDLTGKYITITNGLQDKIFGAETAPVGSIDPIAISADDNNFGTYKGNFFKVVSYDSQAKVAKLDAPINFNVDGQDATVYSSVNSMVYRSIEWDDRNGGSPYETITFRRSYGGGMVDCTGHIHYLDLSYFNACNIIEGNTISFGVCIGITYDSCRNIVTGNRFTSSDDFGDATLLVFKNSCNNIITNNYIHTSRLIGRDKWGVILHTNSDYNIVSGNCVDAKYGIGDYMANKGNLVSDNSINCDGLVFLCLVSSMYSNNRIKLTKPIEFLVSECISFKDNDITYAGGVGLGCISLYDEASKPFGFQGFSVERTRLIDISGTSFKNANVKPTIDFRDVVDFTKSSDKYLPNDWSAISSGYAAIFGITTGKRSLVMHGCRFTGFNVNLYIRVSSAGFYFNIDARDNIHSNQDAAYIMHAKDVNHVAYPLAVYGDSYFNSDIVCLSSNYPVYLKGCYFNKFNSGIVIASYVTTVYMHLLDNSNSFYGTTDSTKYYDLLTGKPSAPNYAGQHTSTGVHQFTHKVPAGAEYFMPVENTFSIPHTVMFINASKGSTSKTIKRTITEVIY
Physico‐chemical
properties
protein length:691 AA
molecular weight: 75501,96020 Da
isoelectric point:5,84921
aromaticity:0,11577
hydropathy:-0,10420

Domains

Domains [InterPro]
IPR012334
STR
2–418
IPR012334
DC_1082
ATT
2–42
DC_1082
DC_1528
STR
35–691
DC_1528
XQM40316.1
1 691
Architecture
ATT
STR
ATT 2-42 | STR 43-691
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQM40316.1
1 691
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9601
Central domain 48 615 569 0,9512
C-terminal 616 691 75 0,9433
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-615
C-terminal
616-691

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage vB_EtA_WCT72P1
[NCBI] 		3403435 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQM40316.1 [NCBI]
Genbank nucleotide accession
PV165920.1 [NCBI]
CDS location
range 39164 -> 41239
strand -
CDS
ATGTCAAAGCTAACTCGTGTAACAGACTGGATGGTGACATTCAAGTCAAGATGTAGTGGTTCAGTTGGCAGGTTGCTATCAGAGAAAATGGAGGAGTCACTTACCGTACGTGATTTTGGTGCCCATCTGAATGGCATTGACCATGATGATGACGCAATCATGAAAATGGCAGAGGCAGTTGGTTACGTTGAGATACCTGCTGGTACAAATGCTGTAATCGGTGGTGAGTTGTTTCTACCTGTAGGGCTGTCATACTTTGGGACAACTTATGGTGGAAGATGCAAAATTACATTGCTTCCAGGGGCAAAGTTACGTGAAACAGGCGGTATTAGTGCAGGCACTGTAAGTGTTACTGCATCTGCAGGTGACACTTCTATTAACTCTGATACTGACTTAACTGGAAAGTACATCACTATCACCAATGGTTTGCAGGATAAGATATTTGGTGCGGAGACAGCACCTGTTGGCAGTATTGACCCTATAGCAATATCAGCAGATGACAATAACTTTGGTACTTACAAGGGTAACTTCTTCAAGGTTGTCTCCTATGACAGTCAGGCTAAGGTTGCAAAACTAGATGCACCAATTAACTTCAATGTGGATGGTCAAGATGCTACTGTATATTCTTCTGTAAACAGTATGGTATACAGAAGCATTGAGTGGGACGACAGGAACGGCGGAAGCCCTTACGAGACCATCACATTCCGCAGGAGTTATGGCGGGGGTATGGTTGACTGCACTGGGCATATACACTATCTGGATTTAAGCTATTTTAATGCATGTAATATTATCGAAGGTAACACCATTAGTTTCGGGGTGTGTATTGGCATCACATATGATAGTTGTAGGAATATCGTAACTGGAAACCGCTTCACATCAAGTGATGACTTCGGTGATGCAACATTACTTGTATTTAAGAACTCGTGTAATAACATTATCACCAATAACTACATACACACATCTAGGCTCATTGGAAGAGATAAGTGGGGTGTAATCCTACATACTAACTCTGACTACAATATCGTATCTGGTAACTGTGTAGATGCTAAATATGGCATTGGTGACTACATGGCTAACAAGGGTAATCTTGTATCTGACAATAGCATCAATTGTGATGGTCTAGTATTCTTGTGCCTTGTAAGTAGTATGTACAGCAATAACAGAATAAAGCTCACAAAGCCTATTGAGTTTCTTGTTAGTGAGTGTATCTCCTTCAAGGATAATGATATTACATATGCTGGTGGTGTAGGTTTGGGGTGTATTAGCCTATACGATGAGGCATCTAAGCCATTTGGGTTTCAGGGTTTCTCTGTTGAACGTACAAGGCTTATTGACATATCCGGTACTAGCTTTAAGAATGCCAATGTAAAGCCAACAATAGACTTCAGGGATGTCGTAGACTTTACAAAGTCTAGTGATAAGTATTTGCCGAATGACTGGAGTGCAATATCTAGTGGTTATGCAGCAATATTCGGAATTACTACAGGTAAAAGAAGCCTTGTTATGCATGGGTGTAGGTTCACCGGATTCAACGTAAACTTATATATCAGAGTAAGCTCTGCTGGGTTTTACTTCAACATCGATGCACGTGATAACATCCATAGCAACCAGGATGCTGCTTATATCATGCACGCAAAAGATGTAAACCATGTAGCATATCCACTTGCAGTTTATGGAGATTCTTACTTTAATAGTGACATTGTGTGCCTGTCTAGCAACTACCCAGTGTACCTGAAAGGTTGTTACTTTAATAAGTTTAATAGTGGAATTGTAATAGCTAGCTATGTTACTACTGTATATATGCACCTTCTTGACAATAGCAATAGCTTTTATGGAACCACTGACAGTACTAAGTACTATGACTTATTGACAGGAAAACCTAGCGCACCTAACTATGCAGGTCAACACACTAGTACAGGTGTTCACCAGTTTACTCATAAAGTACCAGCTGGAGCAGAATACTTTATGCCAGTTGAGAATACATTCTCTATACCACATACCGTCATGTTCATTAATGCATCTAAGGGGTCTACTTCAAAAACTATCAAGCGTACTATAACTGAAGTCATCTACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
56054f36a901c6378304aa81488b6df4f0792fef9c243f98d44c52fd8fedf3ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50