Protein

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Genbank accession
QXV74298.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MAKVDGSVKSLLQGVSQQPPRDRLPGQATLQENMSSDPITGLTRRPATDLVNKLLTSADIRGWHDFDTKDGNKFIAAFYSNTVKVFDLNGTEQTVTVDANAQAYISLAGELRFNTIENDTYVVNRSKTVAMTTLQRSYYNNENRQVFIIQVLGGQYGRVYNVKINGTEYANYQVPNGSVATDVTSTRTKFIATELYNDLVANLTGWSVTLKDDIIVLSIANTNDYTVTVNDDYGNTNIKACGVTVARTEDLPRMAPHNYVVRVAEKTDPETDLWFRFIVEGYENDWTTTNSLSRFGQEGYWQETVAPLTDIELDPATMPHLLSYDATTGTFRFKRNTWANRAVGTTTSNPDPSFVDARITDVATFQGRLVFTSGPNVIMSRTDRDSDFWFGSASEQAESDPIDVRSKVEASTMQAIIQHNRDLVIFSNKGQFIIYGRTKITPANAALVLSSAFEAELRAKPVAAGRNVFFATNFGSYTGIREFYVESGTDINDSRAITQHVKRYIEGKVTKLISSSNYDTLLVQTDADAGVVYWYQYIWNDTEKVQSSWSKLSFSSPVVYMFFDEETVYFVTKDSTDYYLTRMSLDVQPSLDVGYHVHLDNRFDVFEVSTGFVLPYQYLKDTDLIAVQATACPNPGLTVPISSITDVPGTGWVVTLGADMFGGDIVVGSKFASKYIPTMPQVKDQDGVKVGTGNLVISKFKVSLSKTGEIIGQLLSKFGNGPEVRFNGRFVGDINNVVGEQPLSDDTFTLPFGQKADLAEILLSTSSHLPMTLLDIEWEGQYTKRGKRISTNTQSGG
Physico‐chemical
properties
protein length:797 AA
molecular weight: 88431,85350 Da
isoelectric point:5,01771
aromaticity:0,10540
hydropathy:-0,27729

Domains

Domains [InterPro]
IPR058003
TTP
1–789
IPR058003
QXV74298.1
1 797
Architecture
TTP
TTP 1-789 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV74298.1
1 797
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9901
Central domain 139 337 200 0,1586
C-terminal 338 797 459 0,1868
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-797

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph15
[NCBI] 		2836131 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74298.1 [NCBI]
Genbank nucleotide accession
MW980065 [NCBI]
CDS location
range 29412 -> 31805
strand +
CDS
ATGGCTAAGGTAGACGGAAGCGTCAAGTCCCTGCTACAGGGCGTCTCCCAACAGCCGCCGCGAGATCGGCTACCGGGTCAGGCTACTCTTCAAGAGAACATGTCGTCTGATCCGATAACCGGCCTTACTCGCCGCCCTGCCACAGACTTGGTAAACAAGCTGCTGACTAGCGCGGACATTCGCGGCTGGCACGACTTTGATACCAAAGACGGGAACAAATTCATCGCTGCATTCTACAGCAACACCGTAAAGGTGTTCGATCTGAATGGCACCGAGCAGACCGTTACGGTCGATGCAAACGCACAGGCTTACATCAGCTTGGCTGGTGAGCTTAGGTTCAACACTATCGAGAATGACACGTACGTCGTGAACCGCAGCAAGACAGTGGCTATGACCACGTTGCAGCGCAGCTACTACAACAACGAGAACAGACAGGTGTTCATCATCCAGGTTCTCGGCGGTCAGTATGGCCGTGTGTACAACGTCAAGATCAACGGCACCGAGTACGCGAACTATCAGGTTCCGAACGGCTCTGTTGCCACGGACGTTACCAGCACCAGAACCAAGTTCATTGCTACGGAGTTGTACAACGACCTCGTGGCTAACCTGACCGGCTGGTCCGTGACGCTCAAGGACGACATCATTGTACTGTCCATTGCGAACACGAATGACTACACGGTCACGGTCAACGACGACTACGGCAATACAAACATCAAGGCTTGCGGCGTCACAGTGGCCCGCACCGAAGACCTGCCGCGCATGGCACCGCACAACTACGTGGTCCGCGTGGCTGAGAAGACCGATCCTGAAACAGACCTTTGGTTCCGGTTCATTGTCGAGGGCTACGAGAACGACTGGACTACGACCAATAGCTTGAGCCGGTTCGGCCAAGAGGGCTATTGGCAGGAGACGGTAGCGCCGCTTACGGACATCGAGCTTGATCCGGCCACCATGCCGCACCTGCTATCCTACGACGCGACCACAGGCACATTCCGTTTCAAGCGGAACACCTGGGCCAATCGCGCAGTCGGCACGACCACCAGCAACCCGGACCCGTCCTTTGTTGACGCCCGCATCACAGACGTTGCCACGTTCCAAGGGCGACTGGTCTTTACCAGCGGGCCGAACGTCATCATGTCGAGGACAGACCGCGACAGCGACTTCTGGTTTGGCTCTGCTTCCGAGCAGGCCGAGAGCGATCCGATCGACGTACGATCTAAGGTCGAGGCTTCGACCATGCAGGCCATCATCCAGCATAACCGCGATCTGGTCATCTTCTCGAACAAGGGTCAGTTCATCATCTACGGGCGCACCAAGATCACACCGGCTAACGCCGCCCTGGTCCTGTCGTCCGCCTTCGAAGCCGAGCTACGGGCTAAGCCTGTCGCGGCGGGTCGCAACGTGTTCTTCGCTACGAACTTTGGTTCCTATACGGGTATCAGAGAGTTCTATGTCGAGAGCGGCACGGACATCAACGACAGCCGCGCGATCACGCAGCACGTCAAGCGGTACATCGAAGGCAAGGTAACGAAGCTCATATCCAGTTCGAACTACGACACGCTGCTCGTCCAGACGGATGCAGACGCGGGCGTAGTGTACTGGTATCAGTACATCTGGAATGACACCGAGAAGGTGCAGTCCTCGTGGAGCAAGCTTAGCTTCTCTAGCCCTGTCGTGTACATGTTCTTCGATGAAGAGACGGTTTACTTCGTCACGAAGGACAGCACAGACTACTACCTTACGCGCATGAGCCTTGACGTACAGCCGTCGCTTGACGTTGGCTACCATGTCCATCTGGACAACAGGTTCGACGTGTTCGAGGTTAGCACCGGCTTTGTGCTGCCGTACCAGTACCTTAAGGATACGGACCTTATCGCTGTTCAGGCTACTGCCTGCCCTAACCCCGGCCTTACAGTGCCGATCAGCAGCATCACCGATGTTCCCGGTACGGGATGGGTGGTGACGCTAGGCGCTGACATGTTCGGCGGTGACATCGTGGTAGGCTCCAAGTTTGCCAGCAAGTACATTCCGACAATGCCACAGGTCAAGGACCAGGATGGCGTGAAGGTTGGTACGGGCAATCTCGTTATCAGCAAGTTCAAGGTATCCCTGTCCAAGACGGGTGAGATCATCGGGCAGCTTCTCAGCAAGTTCGGTAACGGGCCGGAAGTACGGTTCAACGGTCGCTTCGTAGGCGACATCAACAACGTGGTCGGTGAGCAGCCGCTTAGCGACGATACATTCACCCTGCCCTTCGGACAGAAAGCAGACCTAGCGGAGATACTACTATCCACGTCTAGCCACCTGCCTATGACCCTGCTCGATATCGAGTGGGAAGGACAGTACACGAAACGCGGAAAGCGCATCAGCACCAACACGCAGTCAGGAGGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7675b0bba310f62351a2d03f2150b91a48b8935bea10dcae3658e9f59a32c6fc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank