Protein

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Genbank accession
XNS40155.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDSGNIIDLGIAKGGQIDGNVTIDGTLRVNGPINNFGNFSTSGTITASNIVSATVFRSTSGSFYTRAVNDTSNAHLWFENTNGSERGVLYSKPQSENEGVITMRVRQGTAAGAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKAFGQYDSQSLVQYVYPGTGETNGVNYLRKVRAKSGGTMWHEICTAQTGQADEMSWWTGNTPQSKQYGIRNDGRIAGRNSLALGTFTTGFPSSDYGNTGVMGDKYLVLGDTVTGLKYIKQGVYDLVGGGYSVASITPDSFRSTRKGIFGRSEDQGTTWTMPGTNVAFLSVQTQADENAAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQEGMEVNPGILKIVTGANNVMFYADGTISSVQPIKIDNELFFRSNTNNSGIKFGASSSIDGTKQIIWNGGTRAGQNKSYVTVKAWGNAYSAGSDKSRETVFEVGDGQGYHFYSQRVAPASGSTVGPIQFRVNGGLLTSGSIVASGSITTESSLSVNNGMLVNGELKVGGTADNFRIWNAKYGAIFRRSEDSLYIIPTPINQGESGGITDIRPFSINLGTGSVVMGNHTQAGKNLFTVDNVSKLVQTDVRFRVNMDSDGIVLNASSQAASNFIQGRKADVTKWYLGIGDGGNVVRMHNYTYSHGIALNSDSVDITKPLKVGNAQLGTDGNITNGSGNFANLNTTLNRKVNSGFITYGATAGWYKFATVTMPQSTSTVFFKIAGGSGFNSGLFTQCNIAEIVLRTSNERPADLNAVLYTRTIGSAFKDIAVNNVSGDTYDIYVSAGTYCNQLTCEWTCTENATVSVIGINSSTQSPVDALPDTAVNGQVANVLNNLVDRGKVKRYEADSEIAINNQTGIRIRSNSDKTGSVATMLRNDGGSFYILFTDKNATDGAATVNGDWNSKRPFAINLTTGEVMMNNGIAVRSAALFYNSINVKDNGSINFDKSGANPRNMRIFHAGDASRGNRIEIADETNYIAYFEKAPGGANRFVVNNATVAGVNQMNSFGININNALGGNSIAFGDNDTGIKQNGDGLLDIYANGVQTFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGVIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1227 AA
molecular weight: 131428,57910 Da
isoelectric point:8,35054
aromaticity:0,08476
hydropathy:-0,31426

Domains

Domains [InterPro]
DC_1954
STR
1–1226
DC_1954
G3DSA:6.20.80.10
STR
660–717
G3DSA:6.20.80.10 IPR030392 Coil
IPR048388
ATT
660–733
IPR048388 IPR030392
XNS40155.1
1 1227
Architecture
STR
ATT
STR
STR 1-659 | ATT 660-733 | STR 734-1226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS40155.1
1 1227
Domain Start End Length (AA) Confidence
N-terminal 1 725 725 0,0479
Central domain 726 932 208 0,6301
C-terminal 933 1227 294 0,7784
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-725
Central
726-932
C-terminal
933-1227

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SholemSchwarzbard
[NCBI] 		3233709 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS40155.1 [NCBI]
Genbank nucleotide accession
PP925840 [NCBI]
CDS location
range 153268 -> 156951
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATTCAGGAAATATCATTGATCTAGGTATTGCTAAAGGCGGTCAAATTGATGGAAATGTGACTATTGATGGAACTTTACGCGTCAATGGACCAATAAACAACTTTGGAAATTTTTCTACAAGTGGTACTATTACGGCAAGTAATATTGTTTCTGCTACAGTATTCAGATCAACATCCGGTTCATTTTATACAAGAGCAGTAAATGATACATCAAATGCCCATCTTTGGTTTGAAAATACAAATGGATCGGAGAGAGGTGTTTTATATTCAAAACCACAGTCTGAAAATGAAGGCGTAATCACAATGCGTGTTCGTCAAGGAACCGCAGCAGGGGCTCAAAATTCAGAATTTCATTTCATTTCTACTGATGGTGGTATTTTCCAGGCACGTAAATTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAAGCCTTTGGGCAATACGATTCACAATCGTTGGTTCAGTATGTTTATCCTGGAACCGGTGAAACTAACGGAGTAAACTATCTTCGTAAAGTTCGTGCTAAATCTGGCGGCACTATGTGGCATGAAATCTGTACAGCTCAGACTGGACAAGCTGATGAAATGTCATGGTGGACTGGTAATACTCCTCAATCTAAACAGTATGGTATTCGTAATGATGGCCGAATAGCTGGCCGTAATAGCCTTGCATTAGGTACATTCACTACGGGTTTCCCGTCTAGTGATTATGGAAATACTGGGGTAATGGGTGATAAGTATCTTGTTCTCGGTGACACTGTAACTGGTCTGAAATATATTAAACAAGGTGTTTATGATTTAGTTGGTGGAGGTTATTCCGTTGCATCTATTACGCCTGATAGTTTCCGTAGTACTCGTAAAGGTATATTTGGTCGCTCAGAAGATCAAGGTACAACATGGACTATGCCTGGAACGAATGTTGCATTTTTATCAGTTCAAACACAGGCTGATGAAAACGCTGCTGGAGACGGCCAGACACATATTGGCTATAACTCAGGCGGAAAAATGAACCACTATTTCCGTGGTAAAGGCAAAACTAATATTAATACTCAAGAAGGCATGGAAGTTAACCCGGGTATTCTTAAAATAGTAACCGGTGCAAATAATGTAATGTTTTATGCTGACGGAACTATTTCTTCTGTTCAACCAATAAAGATAGATAATGAATTATTTTTTAGATCAAATACTAATAATTCTGGTATAAAATTTGGCGCTTCTTCTTCTATAGATGGAACTAAGCAAATTATATGGAATGGTGGTACAAGGGCTGGACAAAATAAAAGCTACGTTACCGTTAAAGCGTGGGGTAATGCTTACAGCGCGGGTAGTGATAAATCTCGTGAAACAGTTTTTGAAGTTGGTGATGGACAGGGGTATCACTTTTATTCACAACGCGTAGCTCCCGCTTCAGGATCTACTGTCGGGCCTATTCAATTCAGAGTTAACGGTGGTTTATTGACTTCAGGCAGTATTGTTGCTTCTGGTTCTATTACAACCGAATCTTCTTTGAGTGTTAATAATGGCATGTTAGTAAACGGTGAATTAAAGGTCGGCGGTACTGCAGATAACTTCCGTATTTGGAACGCTAAATACGGTGCTATTTTCCGTCGTTCAGAAGATTCCTTGTATATAATTCCTACACCCATTAACCAAGGCGAAAGCGGTGGAATAACCGATATAAGACCATTCAGTATTAACCTTGGAACTGGCTCCGTTGTAATGGGTAACCATACTCAAGCGGGTAAAAACCTTTTCACGGTTGATAACGTTTCTAAATTAGTACAAACTGATGTTCGTTTCCGTGTTAACATGGATTCCGACGGTATTGTTTTGAATGCTTCTTCTCAAGCAGCGTCTAACTTTATCCAAGGACGTAAAGCAGATGTTACGAAATGGTATTTAGGTATTGGCGATGGCGGAAACGTCGTTCGTATGCATAATTACACCTATTCACATGGTATTGCATTAAATTCTGATTCTGTCGATATTACTAAGCCTCTTAAAGTCGGAAACGCCCAACTAGGAACTGACGGTAATATTACCAATGGTTCAGGAAACTTTGCCAACTTAAATACCACGTTAAATCGTAAAGTTAATTCTGGATTTATTACTTATGGAGCAACTGCTGGATGGTATAAGTTTGCAACAGTAACAATGCCACAATCCACTTCGACGGTCTTCTTTAAAATAGCCGGTGGTTCTGGATTTAATAGCGGATTATTCACACAATGTAATATTGCCGAAATTGTTTTACGTACTAGTAATGAAAGACCTGCTGACTTAAATGCTGTATTATACACAAGAACAATTGGATCTGCATTTAAAGATATTGCAGTTAATAACGTCTCTGGAGATACATATGACATTTATGTTTCTGCTGGAACATATTGCAATCAATTAACTTGTGAATGGACATGTACTGAAAACGCTACTGTTAGTGTTATTGGTATTAACTCATCTACACAATCGCCTGTAGATGCTCTTCCAGACACAGCAGTTAACGGTCAAGTTGCTAATGTTCTTAATAACTTAGTTGATCGCGGTAAAGTTAAGCGTTATGAAGCCGATTCTGAAATAGCTATTAATAACCAAACCGGTATTCGTATCAGAAGCAACAGCGATAAAACTGGTTCTGTTGCTACAATGCTACGAAATGATGGCGGTAGTTTTTATATTCTGTTTACAGATAAAAATGCCACCGATGGCGCAGCAACTGTTAATGGCGATTGGAATAGTAAACGTCCTTTCGCAATTAACTTAACAACCGGCGAAGTGATGATGAATAATGGCATAGCTGTTCGCAGCGCTGCTTTATTCTATAATAGCATAAACGTCAAAGATAATGGTTCTATTAACTTTGATAAATCAGGCGCTAACCCGAGAAATATGAGAATATTTCATGCTGGCGATGCTTCTCGCGGTAACCGTATTGAAATTGCCGATGAAACTAACTATATTGCTTACTTTGAAAAAGCTCCAGGTGGAGCTAACCGCTTTGTAGTAAATAATGCTACTGTAGCTGGTGTTAATCAAATGAATTCATTTGGTATTAACATCAATAACGCGCTTGGTGGAAATAGTATAGCATTTGGTGATAATGACACGGGTATTAAGCAAAACGGCGATGGATTATTAGACATTTATGCGAATGGTGTGCAAACGTTCCGTTTCCAAAACGGTGATTTGTACTCATATAAAAATATAAATGCCCCAAACGTTTATATTCGTTCTGATATTCGCTTAAAATCTAATTTCAAACCTATCGAAAATGCACTTGATAAAGTTGAAAAACTCAATGGTGTCATTTATGATAAAGCTGAATACATCGGTGGAGAGGCAATTGAAACTGAAGCGGGTATTGTGGCTCAAACGTTACAAGACGTTTTACCAGAAGCTGTCCGTGAAACAGAAGACAGCAAGGGTAATAAAATACTCACTGTTTCTTCTCAAGCCCAGATTGCTCTTCTGGTTGAAGCTGTGAAAACACTTTCTTCTCGTGTAAAAGAACTTGAATCTAAACTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f678712db0a5ecc8c0c824e570a22056cf7a5ff12cd61579da135a6786a7e852
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2792
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50