Protein

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UniProt accession
A0A8S5VVQ8 [UniProt]
Protein name
Pulmonary surfactant-associated protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MPDTPGLSTADMQKKMDEIPREIIIPVLNALIDGLNGMDLDKRTHNGGGCLYIRVNSDRVIETSDDSTSWQATGSSGHLIIDETGNEMPQRNRMQFLGATVTDTGLYTVIQARKGDPGQQGPQGPVGPQGPQGVQGPIGPAGPQGAQGLRGATGDPGPAGPAGATGPTGPKGEKGEKGSDGSSFVVKGLYATLSALKAAHPTGVAGDAYAVGTADNNVVYLWDVDKRAWVSVGTLQGPQGPTGPQGPQGPTGSVGPQGPTGPQGETGPQGKQGVQGEPGEKGEQGIQGLRGEQGPTGPQGPQGEKGDPGLVQSVNGKSGEAIVLTAEDVGALDESTAKELISSQTSGKMAASTYDPQGRRTDIFKAIDKVSNIYYATLTLGRWTACSSADQAKDLLCQQTATLTCANRHAPVVTAASEFLSGIGYDKTGVPATDDVLNEVQDIINDGVTVTAYNSVLVKVKEKPTAEIRARWVIQS
Physico‐chemical
properties
protein length:476 AA
molecular weight: 48938,74040 Da
isoelectric point:4,90358
aromaticity:0,03992
hydropathy:-0,48151

Domains

Domains [InterPro]
DC_0575
ATT
1–120
DC_0575 IPR008160 IPR008160 DC_1739
IPR050149
Unmapped
114–317
IPR050149
IPR008160
STR
121–176
IPR008160
DC_1065
STR
165–282
DC_1065
A0A8S5VVQ8
1 476
Architecture
ATT
STR
RBD
ATT 1-120 | STR 121-288 | RBD 335-460 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Pantevenvirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG99410.1 [NCBI]
Genbank nucleotide accession
BK035411 [NCBI]
CDS location
range 17500 -> 18930
strand +
CDS
ATGCCAGATACGCCCGGTTTAAGCACTGCTGACATGCAGAAAAAAATGGATGAAATCCCGCGTGAAATCATTATCCCTGTTTTAAATGCCCTGATTGACGGGCTGAACGGGATGGATTTGGATAAAAGAACCCATAACGGCGGCGGCTGCCTTTATATCCGTGTAAACAGTGACCGCGTTATTGAAACCAGCGATGACAGCACTTCCTGGCAGGCGACAGGTAGCAGTGGGCACTTAATCATTGACGAGACCGGCAATGAAATGCCGCAGCGAAACCGCATGCAGTTTTTGGGGGCCACCGTTACCGATACGGGGCTTTACACGGTTATTCAGGCGCGAAAAGGCGACCCAGGGCAGCAAGGCCCCCAGGGGCCGGTAGGACCGCAAGGCCCGCAGGGCGTGCAAGGGCCTATTGGCCCGGCAGGCCCACAGGGCGCACAAGGCTTACGCGGTGCAACGGGCGACCCCGGCCCAGCAGGCCCGGCAGGCGCAACAGGTCCTACCGGACCGAAAGGAGAAAAAGGCGAAAAGGGAAGCGACGGTTCCAGCTTTGTTGTGAAAGGCTTGTATGCCACGCTCTCCGCACTGAAAGCTGCACACCCAACCGGCGTGGCTGGAGACGCTTACGCGGTTGGAACGGCTGACAACAACGTTGTGTATTTGTGGGACGTTGACAAGAGAGCATGGGTATCTGTTGGAACGCTGCAAGGCCCGCAAGGTCCTACCGGCCCGCAGGGGCCGCAGGGGCCTACCGGCTCTGTTGGGCCGCAGGGACCTACCGGCCCGCAGGGCGAAACCGGCCCGCAGGGTAAACAGGGCGTACAGGGTGAGCCCGGCGAAAAAGGTGAGCAGGGAATCCAGGGTTTGCGCGGCGAGCAAGGCCCTACCGGCCCGCAGGGGCCGCAAGGCGAAAAGGGAGACCCCGGACTTGTACAGAGCGTAAACGGTAAAAGCGGCGAAGCAATTGTGCTTACCGCAGAAGATGTTGGCGCGTTGGATGAGAGCACAGCAAAAGAACTTATCAGCAGCCAAACGTCCGGGAAAATGGCGGCAAGCACCTATGACCCGCAGGGGCGGCGGACCGATATTTTCAAGGCGATCGACAAGGTCTCCAACATCTACTATGCCACGCTGACGCTGGGCAGGTGGACGGCTTGCAGTAGCGCAGACCAGGCCAAAGACCTACTGTGCCAGCAGACGGCTACGCTGACCTGCGCGAACAGACATGCGCCGGTGGTGACGGCTGCCAGCGAGTTTTTGTCCGGCATCGGCTACGACAAGACCGGGGTGCCCGCTACCGATGATGTGCTGAATGAAGTGCAGGACATCATCAACGACGGCGTGACGGTCACGGCGTACAATTCGGTGCTGGTTAAGGTAAAAGAAAAGCCCACCGCCGAAATCCGGGCGCGGTGGGTCATTCAAAGCTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
5590fc23ec60214e35f8088364cd8306dfd82a69e5d162e6f42bbc2338b08b73
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6532
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50