Protein

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Genbank accession
XCN28116.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MFDKNPKIQTAPVAPAQGTNPENNGDRKVVRYLDQIFDPDVHPLEDRAKYVVPYEGELVHDTANHRILIVKHVDKYATWKTTFENYWLLPEQTNDDYDLFPKHEYGFLQGELAFAIDFSERPAVARVDSNATGSDAAYAMVYKGSLINEKGVVISATYEGQNLVSNKIAVSPVVIDNLENKTIVGCNSFSVTQNEAALPNGTRCTLVYYDIAGRPIPPTYPIVVQHCAYLRDHQLSVRYVKNIELIAPWFTNSMRPRTMFVPINLPLTAIEFRARVHYSDGSSEEHPVNSISGDSGFTLHGLDQYKPTTPNQVSDAVVLTYAFKEHEQALIAQPGSPRHMSESYEIVATPAQGAYSPRIYSYPYWDATVGYKLRHWLTDLDRKYCRDVTDQVTLNQASPVFNGKKFGEEQPMIFNLNMRDVSAVYEPWAFVQYTTITLYNPPTNVGRKWDVRHSYSRPPFSALTVEYIQQVNGSVLAKFSKYSTTAEFIADAYDKFEPMFDPRTEIKPPQPTHFDLVRVNGTARTGIPVDAQNNLPISDLTLADGETMYIRWVRRDSTGAELQLGVSATVCKKVTAFS
Physico‐chemical
properties
protein length:578 AA
molecular weight: 65233,66520 Da
isoelectric point:5,79084
aromaticity:0,11246
hydropathy:-0,38529

Domains

Domains [InterPro]
DC_1319
STR
1–578
DC_1319
XCN28116.1
1 578
Architecture
STR
STR 1-578
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCN28116.1
1 578
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,4596
Central domain 85 283 200 0,4870
C-terminal 284 578 294 0,6691
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-283
C-terminal
284-578

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Survivor
[NCBI] 		3232176 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea sp.
[NCBI] 		69393 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCN28116.1 [NCBI]
Genbank nucleotide accession
PP885733 [NCBI]
CDS location
range 6922 -> 8658
strand +
CDS
ATGTTTGATAAGAACCCCAAAATCCAAACGGCTCCAGTTGCTCCAGCTCAGGGTACCAATCCTGAGAACAACGGTGACCGTAAGGTGGTGCGCTATTTGGATCAGATCTTTGATCCAGATGTTCACCCCCTTGAGGACAGGGCCAAATACGTAGTTCCTTATGAAGGGGAACTCGTTCACGATACAGCTAACCACCGCATCCTCATCGTTAAACACGTTGACAAGTATGCGACATGGAAGACGACGTTTGAAAACTACTGGCTGTTGCCAGAGCAAACGAACGACGACTATGATCTGTTCCCTAAACACGAGTACGGATTCCTTCAGGGTGAACTCGCTTTCGCGATTGACTTCTCTGAACGTCCGGCAGTAGCTCGCGTTGACTCCAACGCCACGGGCAGCGATGCTGCTTACGCAATGGTCTATAAAGGGTCACTGATCAATGAAAAAGGCGTCGTTATCTCTGCGACCTATGAAGGACAGAACTTGGTCAGTAACAAGATCGCTGTCTCTCCTGTGGTCATCGATAACCTTGAGAACAAAACCATCGTTGGATGCAATAGCTTCTCTGTTACTCAGAATGAAGCTGCGTTACCAAATGGTACTCGTTGTACTCTGGTTTACTACGATATTGCAGGTCGTCCAATTCCTCCTACGTATCCAATCGTAGTCCAGCACTGTGCTTATCTGCGCGATCACCAACTGAGTGTTCGTTACGTTAAGAACATTGAACTGATTGCTCCGTGGTTCACGAACAGTATGCGTCCTCGCACCATGTTCGTTCCGATCAACTTGCCTCTGACTGCTATTGAGTTCAGGGCACGTGTCCACTACAGCGACGGTTCTTCCGAAGAACATCCGGTTAACTCCATCAGTGGGGATTCTGGTTTCACTCTTCATGGTCTGGACCAGTATAAACCTACGACGCCTAACCAGGTGTCCGATGCGGTAGTATTGACCTATGCGTTTAAAGAACACGAGCAAGCACTCATCGCTCAGCCAGGGTCGCCTCGTCACATGTCTGAAAGCTATGAGATTGTGGCTACTCCCGCTCAGGGTGCTTATAGTCCTCGCATTTATAGCTATCCTTACTGGGATGCTACTGTGGGTTACAAACTTAGACACTGGCTTACTGATCTTGATCGCAAGTATTGCCGTGATGTCACTGACCAGGTCACCCTGAACCAAGCTTCTCCGGTATTCAACGGTAAGAAGTTCGGGGAAGAGCAGCCAATGATCTTCAACCTGAACATGCGCGATGTTTCTGCAGTTTACGAACCGTGGGCATTCGTTCAGTACACGACGATCACTCTGTACAACCCGCCAACCAACGTTGGTCGTAAGTGGGATGTTCGTCACTCCTACTCTCGTCCTCCGTTCAGCGCGCTGACTGTCGAGTACATTCAGCAGGTTAACGGATCTGTACTGGCTAAGTTCTCTAAATACTCTACTACGGCTGAGTTCATTGCTGATGCTTACGATAAGTTCGAACCAATGTTTGATCCTCGTACTGAAATCAAGCCACCACAACCAACTCACTTCGATTTGGTTCGTGTCAATGGAACGGCACGTACAGGTATTCCGGTTGATGCACAGAACAACCTCCCTATCTCTGACTTGACGTTGGCAGATGGTGAGACTATGTACATCCGCTGGGTACGTCGTGATAGCACTGGCGCTGAACTTCAGCTTGGTGTTTCTGCGACAGTCTGTAAGAAAGTGACTGCGTTCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62ccda7bdfe2a9a03a67d52f413b2b5fa9fee06fcf4fa711dfa49b74f9ef2724
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4411
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50