Protein

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Genbank accession
ATE84481.1 [GenBank]
Protein name
putative receptor binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MTIKKFTFFSPNGTEFPVSANADAKLYMLLSGKDYSQFSLRHWETPINTALNRIYKNTSLLVGGRYFELYDEAVALNSNATNFVHANIDISNAINPVTMSVETSDNSNQVDINTGVGVLKKCIEVVTTNAMGVSAVTSPSGSSIIEKIYPVGAYYLSSQPTEPATLFGFGTWSRVKGRGLVGVDESDSALSSGGKQGGSTNPLSQHTITPSSGQFVVARGIGKWHWSSGGAPSNSYAMDTENGGITVGDNTNHNNWQPFEAAYIWKRIN
Physico‐chemical
properties
protein length:269 AA
molecular weight: 28967,88160 Da
isoelectric point:6,20082
aromaticity:0,10037
hydropathy:-0,26394

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10 IPR053827
IPR048780
RBD
2–135
IPR048780 IPR053827
SSF141658
STR
2–139
SSF141658
SSF141658
STR
2–150
SSF141658
ATE84481.1
1 269
Architecture
STR
ATT
STR 1-143 | ATT 144-268 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage LP1502a
[NCBI] 		2027277 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATE84481.1 [NCBI]
Genbank nucleotide accession
MF775703 [NCBI]
CDS location
range 17006 -> 17815
strand +
CDS
ATGACAATTAAAAAATTCACGTTTTTCAGTCCAAACGGTACAGAATTTCCAGTTTCAGCAAATGCTGACGCAAAACTGTACATGTTACTTTCTGGAAAAGACTATTCGCAATTCTCACTAAGGCATTGGGAAACGCCTATAAATACAGCTCTCAATAGAATTTATAAAAACACAAGTTTATTAGTTGGTGGAAGATATTTTGAGCTTTATGATGAAGCAGTAGCCTTAAATTCAAATGCTACGAACTTTGTCCATGCAAATATAGACATTTCTAATGCTATAAATCCAGTGACGATGAGCGTAGAAACTTCTGATAACTCAAATCAAGTTGACATCAATACAGGTGTCGGAGTTCTTAAAAAGTGTATTGAAGTTGTTACAACAAATGCAATGGGAGTAAGTGCAGTCACAAGCCCGTCAGGAAGCAGTATTATAGAAAAAATTTATCCAGTTGGTGCATATTACCTTAGTTCGCAACCAACTGAACCAGCTACATTGTTTGGATTTGGGACTTGGTCAAGAGTTAAAGGTCGTGGGTTAGTTGGGGTTGATGAATCAGATTCAGCTTTATCTAGCGGTGGCAAACAAGGTGGTTCAACAAATCCGTTGTCACAACACACAATAACTCCTTCAAGTGGACAGTTTGTTGTCGCTCGTGGGATAGGAAAGTGGCACTGGTCTTCTGGTGGAGCTCCAAGTAATTCTTATGCTATGGATACAGAAAACGGCGGAATCACAGTTGGAGATAACACTAACCATAATAACTGGCAACCGTTCGAGGCAGCTTATATTTGGAAACGTATAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0a0ef054dc9d7fb50b51be0e56c440edcc8504891244133ec6def038d99dfa31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rates of mutation and recombination in Siphoviridae phage genome evolution over three decades Kupczok,A., Neve,H., Huang,K.D., Hoeppner,M.P., Heller,K.J., Franz,C.M.A.P. and Dagan,T. 2018 — GenBank