Protein

View in Explore
Genbank accession
QBX15738.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSYRGVKVIYNNIDLSEYWEYVTDIHRDAGNEDNLITEDTPMLGEQLLRISRGAKVIDVDFTIWSDDRNKVKRQLAKIFRVDSPKKLIFSDEPDKYYWAVKTGKIEMREDILKRSTGTIRFYVEDGVAHSTTYKRYDNPVISGNKMTFEIENNGSENAYPIIKIKHNSENGYIGVVNSTGALEVGNKQEVDGEMAQKNVMLHRNVGGDFSEWVDGTKNYENPTKIINTQMTSDKAWGGRLGVLPNPFATSGTAGAIQYGAVKELPLAETAKNWYIWARAWFETGLMGQTGAWCLSVIDENDHFIAGMAIEKADASGNTAQIRFLLGDGKGGSRVMQTINFTPCLWFPPNPYGSEGRQENKNANMFDLLKEGDTIKYYWYGSSFRYSDAGIRDVKAKKVQFFVGQYAGRNTTDRMVSMHSLNHFQIEKLHVDYWKDVPNRYPMGSNVVLSSEDVSINVDGLDREMDFVYGSKFVEIPPGKSTLEVYTSDWCKKPPTVTVEFEERWL
Physico‐chemical
properties
protein length:505 AA
molecular weight: 57364,88650 Da
isoelectric point:5,58371
aromaticity:0,11485
hydropathy:-0,53683

Domains

Domains [InterPro]
DC_0420
STR
1–505
DC_0420
G3DSA:2.40.30.200
ATT
3–129
G3DSA:2.40.30.200
IPR006520
Unmapped
8–129
IPR006520
IPR008841
STR
41–107
IPR008841
QBX15738.1
1 505
Architecture
ATT
STR
ATT 1-129 | STR 130-505
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX15738.1
1 505
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9663
Central domain 195 393 200 0,1900
C-terminal 394 505 111 0,4919
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-393
C-terminal
394-505

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan207
[NCBI] 		2548047 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equinus JB1
[NCBI] 		1294274 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus equinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX15738.1 [NCBI]
Genbank nucleotide accession
MK448703 [NCBI]
CDS location
range 33416 -> 34933
strand +
CDS
TTGAGTTATAGAGGTGTAAAAGTAATTTACAACAATATTGATTTATCAGAGTATTGGGAGTATGTCACTGATATTCACCGTGATGCGGGGAATGAAGATAACCTTATCACTGAGGATACTCCTATGCTCGGTGAACAACTTCTAAGGATTTCTCGAGGAGCTAAGGTTATTGATGTTGATTTTACTATTTGGTCTGATGACCGTAATAAAGTAAAACGACAGCTAGCTAAGATTTTCAGGGTTGATTCTCCTAAAAAATTAATCTTTTCGGATGAACCTGACAAGTACTATTGGGCAGTAAAGACTGGTAAGATTGAGATGCGTGAAGATATCCTGAAGCGTTCGACTGGTACGATAAGATTCTATGTCGAGGATGGTGTTGCTCACTCTACAACGTATAAACGTTATGATAATCCAGTGATTTCTGGAAATAAGATGACGTTTGAAATTGAAAATAACGGAAGCGAAAATGCATATCCTATCATTAAAATCAAACATAATTCTGAGAACGGGTATATTGGCGTTGTTAATAGTACTGGAGCTCTTGAGGTTGGTAATAAGCAAGAAGTTGATGGAGAGATGGCACAGAAAAATGTGATGCTCCATCGTAATGTTGGCGGAGACTTTTCAGAATGGGTCGATGGAACTAAAAACTATGAAAACCCAACTAAAATTATCAATACTCAGATGACTTCAGATAAAGCTTGGGGTGGTAGGTTAGGTGTTTTGCCTAATCCTTTTGCTACAAGCGGAACAGCGGGAGCAATACAATATGGAGCTGTAAAAGAGCTCCCATTAGCTGAAACTGCTAAGAACTGGTATATCTGGGCGAGAGCTTGGTTTGAAACTGGACTAATGGGACAAACTGGTGCTTGGTGTCTTAGTGTTATTGATGAGAATGACCACTTTATTGCTGGTATGGCGATTGAGAAGGCAGATGCTTCAGGGAATACTGCCCAGATTCGTTTTCTTTTGGGAGACGGAAAAGGTGGAAGTCGAGTGATGCAAACTATCAATTTCACGCCGTGCCTATGGTTCCCACCAAACCCTTACGGTTCAGAAGGTCGCCAGGAAAATAAAAACGCTAACATGTTCGACTTATTAAAAGAAGGAGATACTATCAAGTACTATTGGTATGGGTCAAGCTTCCGCTATTCTGATGCTGGCATTCGTGATGTAAAAGCGAAGAAGGTTCAATTTTTCGTAGGTCAATACGCAGGTCGTAATACAACCGATAGGATGGTTTCCATGCACTCTCTTAACCATTTCCAAATCGAAAAACTACACGTTGATTATTGGAAAGATGTACCCAATAGATACCCAATGGGGTCAAACGTTGTATTATCTAGCGAGGATGTCAGTATCAATGTTGATGGATTAGATAGGGAGATGGATTTTGTATATGGTTCAAAATTCGTTGAAATTCCTCCTGGTAAATCTACTTTGGAGGTTTATACGTCTGATTGGTGTAAAAAACCTCCTACAGTAACGGTCGAATTTGAAGAAAGGTGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16422dbe3bd3b8f42235b1a5eedaea889d0e8417b9f321d43b6e3c3521d53f63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8463
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50