Protein

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Genbank accession
AWD93192.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGAMKIPTGGFGDYSITVGSIGDFIIDTFNLATKDYVDTLLLEKEGRIDTTGVFLTPVSQNSSVPDTTNDVIDEVAQALLNRIEYVKDNFSAAPSHNELTGRSASGAHPSTSISHKSGTVYTYLSNVESDINTINNVTIPTINQSIGLKQDQITTTGTLTGTPEETGINSVSHVGINGALQGLLNRILFNKNHSNLTNRSDENSHPSSAIQDGQETQKIINDKNIRKLDSISDLETYNPRTNYQVVYVKSYSSSTNFGGGHFVFLANDTTTTNGVNVFSAIGGRWQRLNWKNPTIHDVGLVGNESDATLKFQALVDAASNLKLKVNLLGKSIKITKLDIPSDMYLFNGTLDATSSTWQNTYGRAALMLKNTDRNAVGVDYEISEYYAPLSTIENITFEDITFKAITLIGIFFKFKNLNYIRCKGYWTQQNLFKFIGGWNGTPLVNDTPTSYNLVDPINGRCEYINIHDCYWFGGYTNNDFSSPFRFIACGKVNISGGINDSPLGFHIDIYNKDFTLTNADYINSNDQIVIDVANGTAHPDMMALYVGQNSYNINVFGGSWRNFGKKAAYLECCSKVNINGVIAEVTVDNNVASFIDLQPNWKNNTNTIWGNVSDITVNNCTSKGTKYGIQCNPYQGVKSLRNIYITDNNIITYSVFESVTLIGVENYIIKNNNCKGSLFIGQNNTKGEIINSKFYNQSNFALYISDQVDGELPKLLNNSFIVDSGSTIYNNGGSSKSGSIVGGILKSGAGSTIMELGVAANLVAYDFENGITQRTQNFSQNINVPANSTSSTITKTIDGVKEGWIASINVHGIVALGYDLTFIVSCENNGIAFKVKNNSSTAVNFNPNLLLRLNSFADQVFKN
Physico‐chemical
properties
protein length:863 AA
molecular weight: 94451,30210 Da
isoelectric point:5,49112
aromaticity:0,09849
hydropathy:-0,23024

Domains

Domains [InterPro]
DC_0717
ATT
194–329
DC_0717 DC_2264
IPR059934
RBD
228–288
IPR059934
AWD93192.1
1 863
Architecture
ATT
RBD
ATT 194-329 | RBD 486-863
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWD93192.1
1 863
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,9953
Central domain 309 762 455 0,9837
C-terminal 763 863 100 0,9694
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-762
C-terminal
763-863

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_B9
[NCBI] 		2163899 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWD93192.1 [NCBI]
Genbank nucleotide accession
MH133207.1 [NCBI]
CDS location
range 40985 -> 43576
strand +
CDS
ATGGGAGCAATGAAGATTCCTACAGGTGGCTTTGGTGACTACAGTATTACAGTCGGTAGTATTGGAGATTTTATTATTGATACATTCAATCTAGCCACTAAAGATTATGTAGATACTTTACTTTTAGAAAAAGAAGGTAGAATTGATACGACAGGAGTATTTCTTACTCCTGTATCACAAAATTCAAGTGTTCCTGATACTACTAACGATGTAATTGATGAAGTTGCTCAAGCACTATTAAACAGAATTGAATATGTTAAAGACAACTTTAGTGCTGCACCTTCCCACAATGAATTAACAGGAAGAAGTGCTTCTGGTGCACACCCATCTACTTCTATTTCACACAAGTCTGGAACTGTTTATACGTATTTATCAAATGTTGAATCTGATATTAATACAATTAATAATGTTACAATTCCTACTATCAATCAATCAATTGGTTTAAAGCAAGATCAGATTACAACAACAGGAACATTAACCGGTACACCTGAAGAGACTGGTATTAATTCAGTTTCTCATGTTGGTATTAATGGTGCGCTACAAGGTTTATTAAACAGAATTCTGTTTAATAAAAATCACAGTAATTTAACAAATAGAAGTGATGAAAATTCACATCCATCTTCTGCAATCCAAGACGGACAAGAAACTCAAAAAATAATCAATGATAAAAATATAAGAAAATTAGATTCGATTTCTGATTTAGAAACTTATAATCCAAGAACTAATTATCAAGTAGTTTATGTAAAATCTTATTCTAGTTCAACAAATTTTGGTGGTGGTCATTTTGTTTTTTTAGCAAATGATACAACAACCACAAACGGAGTTAATGTTTTTTCAGCCATTGGTGGAAGATGGCAAAGATTGAATTGGAAAAATCCAACAATTCACGATGTGGGGTTAGTTGGTAATGAATCTGATGCTACTCTGAAATTCCAAGCACTTGTAGATGCTGCATCAAATTTAAAACTAAAAGTTAACTTATTAGGAAAATCTATTAAAATCACAAAATTAGATATTCCTAGTGATATGTATCTTTTTAACGGTACACTAGATGCTACATCTAGTACATGGCAAAATACATATGGTCGTGCAGCATTAATGTTAAAAAATACAGATCGAAATGCTGTTGGTGTTGACTACGAAATATCTGAATATTATGCACCGTTATCAACTATTGAAAATATAACTTTTGAAGATATTACTTTTAAGGCAATCACTTTAATCGGAATATTTTTTAAATTTAAAAACCTAAATTATATTAGATGCAAGGGGTATTGGACTCAACAAAATCTATTTAAGTTTATTGGTGGTTGGAATGGCACTCCTTTAGTAAATGACACTCCAACTTCATATAATCTTGTAGATCCTATAAATGGTAGATGTGAATACATTAATATTCACGATTGTTATTGGTTTGGTGGTTACACTAATAATGATTTTTCCAGCCCATTCCGATTTATTGCTTGTGGTAAAGTAAATATTAGCGGTGGTATTAATGATAGTCCACTTGGTTTTCATATCGATATATATAATAAGGATTTTACTTTAACAAATGCAGATTATATAAACAGTAATGATCAAATTGTTATTGATGTAGCTAACGGGACAGCACATCCTGACATGATGGCTTTGTATGTTGGGCAAAACTCTTACAACATTAATGTCTTTGGTGGTTCGTGGAGAAATTTTGGTAAAAAAGCAGCATACCTAGAATGTTGTTCAAAAGTTAACATAAACGGAGTTATTGCAGAAGTTACTGTTGATAACAATGTAGCCAGTTTTATTGACTTACAACCAAACTGGAAGAATAACACCAATACGATATGGGGTAATGTTTCAGACATTACTGTTAATAATTGCACATCAAAAGGTACAAAATACGGCATTCAGTGTAACCCTTATCAAGGTGTTAAGTCTCTTAGAAATATATACATTACTGATAATAACATTATTACATATTCTGTTTTTGAATCAGTAACATTAATTGGTGTTGAAAACTATATTATTAAAAATAATAATTGTAAAGGTTCTTTATTTATAGGTCAAAATAATACTAAAGGTGAAATTATTAATTCAAAATTTTACAATCAATCAAATTTTGCATTATATATTTCAGATCAAGTTGATGGTGAATTACCAAAACTACTAAACAATAGCTTTATTGTAGATTCTGGTTCAACAATATACAACAACGGTGGATCAAGTAAATCTGGTTCAATTGTTGGTGGTATATTAAAATCAGGAGCAGGGTCTACAATTATGGAATTAGGTGTAGCTGCAAACTTAGTTGCTTATGACTTTGAAAATGGTATAACACAAAGAACACAGAATTTTAGTCAAAATATAAATGTACCTGCAAATTCTACATCCTCTACAATAACAAAAACAATAGATGGCGTTAAAGAAGGTTGGATTGCATCAATTAACGTACATGGAATTGTTGCTCTTGGTTATGACCTTACTTTTATTGTTTCTTGTGAAAATAATGGTATAGCATTCAAAGTTAAGAATAACTCTAGTACCGCTGTTAACTTTAATCCGAATTTGTTGTTAAGACTAAATTCATTTGCTGATCAAGTATTTAAAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9a056e1efdd79ed6d8e017f455f6a0a0cabf62b2cb9602796afb3f6878277e14
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A new phage endolysin active against S. aureus biofilms Oliviera,H., Costa,A.R., Ferreira,A., Konstantinidis,N. and Azeredo,J. 2016-06 — GenBank