Protein

View in Explore
Genbank accession
XGT88830.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MPVIHIQKMPGVPKETGNVPAGTNLWRWLENSGLPSDIRIALNGRIFGPDDELSISLKQNDIVNIYCQPRGAIGDLISTILKPVTKVLSFLLPKASTPSTSTGTTVESPNNSLKSQTNIARNGEARPDNFGQIRAFPDLIQESLFEYIDDLKYVTEFMNFGLGKYTISSVRYAETNLGSLPGATHVIYNPGDVIGKIIEPYQFDGLDGQEVPGLNESEDTPIETATTTSVTSGDYAGGQLLIVIPKNTDFDYFMGLSLPHSVSLTINITYDSTSGPVTENIQLSGNIISAEETETGVIPDIQYFYNFTFNNLTGANIGNLTGATINNTYFQIVDNEALVVGPYVGAVESTQVWVHVQSDLGPTSGTADYLIKVWAVDDNGDAIPGTEEQLADSIDNPFNQTTKTYYRTYKLTPAYGLAKYAISIERTNNSNSGNRVTLQAAHAINIRENVVYPDDTLVKVTVKATLQPTSVTERKYNALITRWTIGYNRTIGTVNYTLTPSRSFADSVLHNWLITAGQPESTIDIGRLYEIADALPDERLGYFDYTFDDEDKSIGERIQTICDAARVTVFWDDGVLSFSRDEQKSTPETVFNTRNTQADGYKMSYDMTLPGSYDGVSVQYRDPNTNKQAYVYYKVGTSGIEPGEPTKPKKFDMLYVRNLYQATDRAMLECNRLMYSRRGMEIKALADGEWVNVGDMISVVDIYDSVQQTGVIRSRSGNVFTTSEQLTAGSGLFVVITGANGNVSERLACTVTGLNTFECALPSDFELNIFDGVNVQSESRYAISTEVELDSTLWTVSQKTPGTDGTVSLTVTEYNDAMYAYTNPVA
Physico‐chemical
properties
protein length:826 AA
molecular weight: 90828,13870 Da
isoelectric point:4,53003
aromaticity:0,09443
hydropathy:-0,27990

Domains

Domains [InterPro]
DC_0118
STR
1–667
DC_0118 DC_0808
NF040662
Unmapped
348–820
NF040662
XGT88830.1
1 826
Architecture
STR
RBD
STR 1-667 | RBD 684-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpS_GP-1
[NCBI] 		3146124 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGT88830.1 [NCBI]
Genbank nucleotide accession
PP454752 [NCBI]
CDS location
range 28067 -> 30547
strand +
CDS
ATGCCGGTTATTCACATTCAGAAGATGCCAGGAGTTCCAAAAGAGACGGGTAATGTTCCTGCTGGCACTAATCTGTGGAGATGGCTGGAGAATTCCGGCCTTCCATCTGACATCAGGATTGCGCTGAATGGCCGCATTTTTGGCCCTGATGATGAATTGTCGATATCGTTAAAGCAAAACGATATTGTTAACATTTACTGTCAGCCTCGCGGCGCCATTGGCGACCTTATCAGCACGATACTAAAGCCTGTAACTAAGGTTCTTTCTTTTCTGCTGCCAAAAGCATCAACGCCATCAACCAGCACCGGCACGACGGTTGAATCACCCAATAACAGCCTGAAATCGCAAACCAATATCGCGCGTAATGGAGAGGCAAGACCTGACAACTTCGGTCAGATAAGGGCATTCCCTGACCTGATTCAGGAATCGCTTTTTGAATACATTGACGATCTGAAGTACGTCACTGAGTTCATGAACTTTGGCCTTGGGAAATACACCATTTCATCTGTTAGATATGCAGAAACAAACCTCGGGTCTCTGCCCGGCGCCACTCATGTCATCTACAATCCAGGTGATGTGATCGGGAAAATCATTGAGCCTTACCAGTTCGACGGTCTTGATGGTCAGGAGGTTCCAGGACTGAACGAATCAGAAGATACCCCGATAGAGACAGCGACCACGACATCTGTTACTAGTGGTGATTATGCTGGCGGACAGTTGTTAATAGTCATACCAAAAAACACTGATTTCGATTATTTTATGGGGCTGTCTTTACCGCACTCTGTGTCATTAACAATAAATATTACCTACGATTCGACATCCGGGCCAGTTACTGAAAACATTCAGCTTAGTGGCAACATAATTTCAGCTGAGGAAACTGAGACAGGCGTCATTCCTGATATTCAGTATTTCTATAATTTCACCTTCAATAACCTGACAGGCGCAAATATTGGCAACCTGACAGGCGCAACCATCAACAACACTTATTTCCAGATTGTGGATAATGAGGCGCTTGTTGTTGGCCCATATGTTGGGGCTGTGGAGTCTACGCAGGTATGGGTTCACGTTCAATCGGATCTTGGGCCTACCAGTGGCACGGCAGATTACCTGATCAAGGTATGGGCGGTTGATGATAATGGGGATGCCATCCCAGGGACTGAGGAGCAGCTCGCAGACAGTATTGACAACCCATTTAATCAGACAACAAAAACCTATTATCGCACGTATAAATTAACTCCTGCTTATGGGCTGGCTAAGTATGCCATCAGCATTGAAAGGACAAACAACTCAAACTCTGGCAACCGCGTAACGTTGCAGGCGGCGCACGCCATCAACATCCGCGAGAATGTAGTTTATCCTGATGACACCCTTGTTAAAGTGACTGTGAAGGCCACGCTTCAGCCCACATCAGTTACTGAGCGCAAATATAATGCGCTGATCACCCGCTGGACTATTGGATACAACAGAACAATTGGGACAGTTAACTATACGTTAACGCCATCAAGAAGTTTTGCAGATTCAGTGCTGCATAACTGGCTTATTACCGCTGGTCAGCCTGAAAGCACCATTGACATAGGCAGGCTCTATGAAATAGCTGATGCGCTTCCTGATGAGCGCCTTGGGTACTTTGATTATACCTTTGACGATGAGGATAAGTCCATTGGTGAACGAATTCAGACCATCTGTGATGCAGCTCGCGTAACGGTATTTTGGGATGATGGTGTTTTATCTTTTTCAAGAGATGAGCAAAAATCAACGCCTGAAACCGTGTTCAATACCAGAAACACGCAGGCCGACGGCTATAAAATGTCTTATGACATGACTTTGCCTGGGTCATATGATGGCGTAAGCGTTCAGTACCGCGACCCAAACACAAACAAACAGGCTTACGTTTATTATAAAGTTGGCACTTCTGGTATAGAGCCGGGAGAGCCAACTAAGCCGAAAAAATTCGACATGCTATATGTTCGAAACCTGTACCAGGCAACAGACCGGGCTATGCTTGAATGCAATCGTCTGATGTACTCACGCCGAGGAATGGAGATAAAGGCGCTTGCTGATGGCGAGTGGGTGAACGTTGGCGATATGATTTCCGTTGTCGACATTTATGATTCAGTACAGCAGACTGGAGTTATCCGATCAAGGTCTGGAAACGTATTTACCACCAGTGAGCAGCTCACAGCAGGAAGCGGCCTGTTTGTGGTCATCACTGGCGCCAATGGAAATGTGTCAGAGCGTCTCGCTTGCACTGTTACTGGATTGAATACATTCGAGTGCGCATTGCCATCTGATTTCGAGTTAAACATTTTTGACGGTGTTAATGTTCAGTCAGAATCAAGATATGCCATCTCAACAGAGGTTGAACTTGACTCAACGTTATGGACGGTCAGCCAGAAAACTCCAGGTACAGATGGCACAGTGTCTCTCACAGTAACTGAATACAATGACGCCATGTACGCCTACACCAACCCTGTTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ddaec0c03c771454fdd0e08862181f83876843b6d890476f2120ef4024f52108
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3015
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of four novel bacteriophages targeting multi-drug resistant Klebsiella pneumoniae strains of sequence type 147 and 307 Ponsecchi,G., Olimpieri,T., Poerio,N., Antonelli,A., Coppi,M., Di Lallo,G., Gentile,M., Paccagnini,E., Lupetti,P., Lubello,C., Rossolini,G.M., Fraziano,M. and D'Andrea,M.M. 2024 — GenBank