Protein

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Genbank accession
YP_010660143.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGKFLGISGGAIELKDRVAVRSASQLAGTLSSSKEYFIDGIIDMGTQSVEVPAGGLYLTGYNFDTSKLISSEPNYTMFTSPVGGSGNIVGKDYGIEVTGANSKVYDISGDTGFEAFEFSRINYNDCESLGEINNYRQGFETGTGRFGGKPELTLSGTWVGGYFIESSIVRSLADGAYSLFKAGTALTLGSRFRTNMNVDLPASASFFDFSPTNFPNPSTLQVDSAIVTRLGAQDATDLNYTPNISASDLACSWSNNVGMPNTFEGGSIGIGASAVTNINTIDVFEDVAATSWITADLQHFDNPVGGQLRHLGINPREYKTIASLTIEGANNDVLTLRVVKWDDSASSFVTVLDQVRPVNNLVGARDVAFFNINVNTRLDQNDYIKLQVANNSGTANVTAETDGYLVVEQR
Physico‐chemical
properties
protein length:410 AA
molecular weight: 43870,05220 Da
isoelectric point:4,48189
aromaticity:0,09756
hydropathy:-0,12341

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage HS5
[NCBI] 		1357709 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010660143.1 [NCBI]
Genbank nucleotide accession
NC_070825.1 [NCBI]
CDS location
range 25453 -> 26685
strand +
CDS
ATGGGTAAATTTTTAGGTATATCAGGTGGCGCAATTGAACTGAAAGACCGTGTCGCAGTTAGGTCTGCGTCACAACTGGCAGGAACCTTAAGCTCATCAAAAGAGTACTTCATTGACGGCATTATCGATATGGGAACTCAATCAGTAGAAGTTCCTGCTGGCGGGCTTTATTTGACAGGTTACAACTTTGACACTTCAAAGTTAATATCTAGCGAGCCAAATTACACAATGTTCACATCACCAGTTGGCGGCAGCGGCAATATCGTTGGTAAAGATTATGGCATCGAAGTTACAGGGGCAAATTCAAAGGTTTACGATATTAGCGGCGATACAGGATTTGAGGCTTTTGAGTTTAGTCGCATAAATTATAACGACTGCGAATCACTTGGCGAGATTAACAACTATAGGCAGGGCTTTGAAACTGGCACAGGTAGATTCGGCGGAAAGCCTGAGTTAACACTATCGGGCACATGGGTTGGCGGGTACTTTATTGAGTCGTCAATTGTAAGAAGCTTAGCCGATGGTGCTTACTCGCTATTTAAAGCTGGTACGGCGCTCACGCTAGGGTCAAGATTTAGAACAAACATGAATGTTGACCTACCTGCAAGCGCTTCATTCTTTGACTTTTCCCCTACAAACTTCCCCAACCCGTCAACACTGCAAGTTGATAGTGCCATTGTTACTAGACTTGGCGCGCAGGATGCTACGGATTTAAACTACACACCTAACATATCAGCGAGCGACTTAGCATGCTCATGGTCTAATAATGTAGGGATGCCAAACACGTTTGAAGGTGGCTCAATTGGTATAGGCGCATCGGCAGTCACAAATATAAATACCATTGATGTTTTTGAGGATGTTGCAGCAACATCTTGGATAACCGCTGACTTGCAGCACTTCGATAATCCAGTGGGCGGTCAATTGAGGCATTTAGGTATAAACCCAAGGGAGTACAAAACAATAGCTTCATTGACTATTGAAGGCGCCAATAATGATGTGTTAACACTAAGGGTTGTTAAATGGGATGATTCTGCATCATCATTTGTTACCGTGTTAGATCAAGTTAGGCCAGTTAACAATCTTGTCGGCGCCCGAGATGTTGCATTTTTTAACATAAACGTAAATACAAGGCTAGACCAAAATGATTACATCAAGCTGCAAGTAGCAAACAACTCAGGAACCGCAAATGTTACTGCGGAAACTGATGGCTACTTAGTAGTGGAACAGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88d559958f95789a07aceb0069f15413d738c1f156d94518516f327ea6c6b06c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudoalteromonas phage genomics Duhaime,M.B. and Sullivan,M.B. 2010-07-08 — GenBank