Protein

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Genbank accession
QGH45089.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYVSTAWGRPIQGVSQQPDRVRLEGQCTKQENAIPDVVKGLTKRPALNYVNSILGYELSENSAFHSYDRGDEQYFMFIEPNTSTIKVFNLSGNSQNVTIASGSGGYLNTPRPDLNIDFITVADFTFITNKTVPVLMGTATSPLPSRLGIVYSQYATYGKTYNIIVNGTVISSYTTPDGSASHHINDVATDYVSLVLYTKIAGGTIADGEGAGTYPAQTDYVVSLHNNVIWIELASGADFKLSTSDSQKGEDLIAAKGSVTNTNSLPPVAPDNFTLRITGAGKSSKDDYWLRADNSNDSGIRWVETVEPGILVNINADTLPHTLVREGISGGVANFKFSQGIYDDRTVGGEDSNPLPGFINIDNPQPILSTGVFQNRLFFLSGESICMSRSNLFFNFWKETSQTSADSDPIEGYADTDRVNNLYNYQILNGDLALFSDNAQFVIDGSKPVTKSNITLTQVTAYPSEVNIKPQAAGENVFFAYNASSYTGVRELFTDNYSDTKKAYPVTDYVSKYLVGRCKQMLASTNLNTMLVRTYADLSKVYVYDWLWQDNQKVQSAWHTWVFDGKVMYTFYIEDKLYVVYTWGGTTYVDFLYMVNDPDTSGLPYSTKLDHRVSVNASYNPSTKKYSFHLPYDRPDVVCTIHTGGHAEDLGSAFIATYLGLGNWETTEDLSPNGQALEILCGVKYRYSYIPTQPVVKDARDRVIGLSSIIMSNLFIHYETTGDIYVTATPKNGTVRDYHFSGRYMGTAENLVGAPILDNGTYRVPIRQRAEDMQIEIWSDSHYPITIRDMEMDGTFHQRGQRI
Physico‐chemical
properties
protein length:804 AA
molecular weight: 89276,50140 Da
isoelectric point:5,03198
aromaticity:0,11567
hydropathy:-0,30709

Domains

Domains [InterPro]
IPR058003
TTP
1–804
IPR058003
QGH45089.1
1 804
Architecture
TTP
TTP 1-804
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGH45089.1
1 804
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9913
Central domain 140 338 200 0,1490
C-terminal 339 804 465 0,1548
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-804

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Reminis
[NCBI] 		2662139 Uroviricota > Caudoviricetes > Autographivirales > Reminisvirus > Reminisvirus reminis
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH45089.1 [NCBI]
Genbank nucleotide accession
MN478376 [NCBI]
CDS location
range 9225 -> 11639
strand -
CDS
ATGGCTTATGTGAGTACAGCTTGGGGTAGGCCCATACAAGGTGTATCCCAGCAACCTGATAGGGTTAGGCTGGAAGGTCAATGCACAAAGCAAGAGAATGCTATTCCAGATGTTGTTAAAGGGTTAACTAAGAGACCTGCACTTAATTATGTCAACAGCATCTTGGGTTATGAGCTTAGTGAGAACTCTGCATTTCACAGCTACGATAGAGGCGATGAGCAGTACTTCATGTTTATTGAACCTAACACAAGTACTATCAAGGTCTTTAATTTAAGTGGCAATAGTCAGAACGTTACTATCGCAAGCGGTAGTGGTGGTTACCTTAATACACCAAGACCTGACCTAAACATAGACTTCATTACTGTAGCTGACTTCACTTTCATTACTAATAAAACTGTGCCAGTGTTAATGGGTACAGCAACCTCACCATTGCCATCTCGCCTTGGTATTGTATACAGTCAGTATGCAACTTATGGAAAGACTTATAACATTATCGTTAATGGTACAGTTATATCATCTTATACAACCCCAGACGGCTCAGCCTCTCATCACATTAATGATGTAGCCACTGACTATGTATCCCTTGTGCTATATACAAAAATAGCTGGAGGTACAATAGCTGATGGGGAGGGTGCTGGGACTTACCCAGCTCAGACTGATTATGTTGTTAGTTTACACAATAATGTAATCTGGATTGAGCTAGCCAGTGGTGCTGACTTTAAGCTCTCCACCTCTGACAGTCAGAAGGGTGAAGACTTGATAGCTGCCAAGGGTTCAGTAACTAACACTAACTCACTACCTCCAGTAGCCCCTGATAATTTCACTCTAAGAATTACGGGTGCTGGTAAGTCATCTAAAGATGATTATTGGTTAAGAGCTGATAATAGTAATGACTCTGGTATCAGGTGGGTAGAGACAGTGGAGCCGGGTATCCTTGTTAATATAAATGCGGATACTCTACCTCATACTTTGGTAAGGGAAGGCATCTCTGGAGGTGTGGCTAACTTTAAATTCAGCCAAGGTATCTATGATGACCGTACAGTAGGTGGGGAGGATAGCAACCCGCTCCCTGGATTTATTAACATAGATAACCCACAACCTATTCTATCAACTGGTGTGTTCCAGAATAGGCTATTCTTCCTTAGTGGTGAGTCTATTTGTATGTCACGCTCCAACTTGTTCTTTAACTTCTGGAAAGAGACATCACAGACATCAGCTGACAGTGATCCTATTGAGGGTTATGCAGACACTGATAGAGTTAATAATTTGTACAATTATCAGATACTGAATGGAGACTTAGCACTATTCTCTGACAATGCACAGTTTGTTATTGACGGTAGTAAACCAGTAACTAAAAGCAATATTACACTGACACAAGTTACAGCGTATCCAAGCGAGGTTAATATTAAACCTCAGGCTGCTGGTGAGAATGTATTCTTTGCCTACAACGCATCTAGTTACACTGGCGTAAGGGAGCTGTTTACAGACAACTACTCTGATACAAAGAAAGCGTATCCAGTAACTGACTATGTGAGTAAGTACTTAGTTGGTAGGTGTAAGCAGATGTTGGCCTCGACTAACCTTAATACAATGCTGGTCAGAACTTATGCTGACTTAAGCAAGGTATATGTTTATGATTGGTTATGGCAAGATAATCAGAAAGTTCAAAGTGCTTGGCACACTTGGGTATTCGATGGGAAAGTCATGTATACCTTCTATATAGAGGATAAACTTTATGTAGTCTATACGTGGGGTGGTACTACCTATGTAGATTTTCTCTACATGGTCAATGACCCAGATACATCTGGTCTACCTTATTCAACTAAGCTAGATCACAGAGTTTCTGTAAATGCTTCATATAACCCATCTACCAAGAAGTACTCATTTCACCTGCCTTATGATAGACCAGATGTTGTATGCACAATACATACTGGTGGTCACGCAGAGGACTTAGGTAGTGCATTTATTGCAACCTACTTAGGCTTAGGAAATTGGGAGACAACAGAGGACTTAAGCCCTAACGGTCAGGCTCTAGAGATACTTTGTGGTGTTAAGTACAGGTATAGCTATATCCCTACTCAGCCAGTTGTTAAGGATGCTCGTGATCGTGTTATAGGTCTGAGTAGTATTATCATGAGCAACCTGTTTATACACTACGAGACAACAGGTGACATCTATGTAACTGCAACTCCAAAGAATGGTACTGTTCGTGATTACCATTTTAGCGGTCGTTACATGGGTACTGCCGAGAACCTAGTGGGTGCTCCTATCCTTGATAATGGTACATACCGTGTACCTATCAGGCAGAGAGCAGAAGATATGCAAATAGAGATTTGGTCGGATAGTCACTACCCAATAACCATAAGAGATATGGAGATGGATGGAACATTCCACCAGAGAGGGCAACGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a788fe15aad7eb7d8592e91b62c2554eae7f4d6bbbcfa4d623007867601c79c9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage as agents antimicrobiens Lightbourn,L., Amarillas,L., Estrada,M., Leon,R., Figueroa,L., Patron,O. and Leon,J. 2020-04-04 — GenBank