Protein

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Genbank accession
YP_009966819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTRNVEELFGGVITAPHQIPFTYKSNVGGETFLSLPFYPVTGVITINGGMQVPLDNFEIEGNTLNLGRALSKGDVVYCLFDKILSPEDTAKGIRIYKFQAVGGETEFTPDFTSYGVQSLYIGGEYKTPEIEYSYNSTTGKVSLQTALTAGVWVVAEMSVKQPNISPAFDRSIQEIARSANVKDSEVIVSTDTISLLDGKKVVYDIATQTSYGLPTIPDGSVISTISDGKLNYNPGDVQVDLLPLPDSSQAVKLFYLQPSGAENIKVSSGDTVQDILNNINKHRVVGSMAELLNVSPTETTFVFVTSFHPSTNYGGGFFRWDPSGNKAAHNGGTIIDPGKTFPTWDSAGKTSWFTASGTGTGVWRRQDVMGHYRAEDFGALPWNVGDAHDSTKEFQQVANVAYRGGCWRWTGRHRITSYIDIPNKQTFGSYAQMTSVYSELFQPSNFQGVHVISDPSLARSVQNAVFFDAATGEAFRCGEGASPTDCLVYGRGFTTTGMDLATSLPSAASYCDTQAFRHGKAINVRNVTVALMKYALDSNPWDASKGDYYSTTDHMTILYCYCISRVPSGQDITFNTKHINMRAYVNQIGDYGLAVRNVVFIGGSIEGYNTSTYLRSSTQLSFKGTYFETGDTAFNGTVFSLVGWCTLNFEECLVYLNNTKNFVSSGGSGQSAGVLGLTIKSQGNVWRKTDVGTTTVFAVDPVTNKQALLGSEILNAVSGATIAYWAGAVPPGTYTAPISVAF
Physico‐chemical
properties
protein length:742 AA
molecular weight: 80358,95930 Da
isoelectric point:5,40638
aromaticity:0,11321
hydropathy:-0,14232

Domains

Domains [InterPro]
DC_0116
ATT
1–94
DC_0116 G3DSA:3.30.2020.50 IPR059934 DC_0516
G3DSA:3.30.2020.50
ATT
160–244
G3DSA:3.30.2020.50
YP_009966819.1
1 742
Architecture
ATT
ATT
RBD
STR
ATT 1-94 | ATT 156-244 | RBD 280-366 | STR 367-742
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009966819.1
1 742
Domain Start End Length (AA) Confidence
N-terminal 1 387 387 0,9859
Central domain 388 731 345 0,9784
C-terminal 732 742 10 0,2451
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-387
Central
388-731
C-terminal
732-742

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se-J
[NCBI] 		2698910 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009966819.1 [NCBI]
Genbank nucleotide accession
NC_049497.1 [NCBI]
CDS location
range 67898 -> 70126
strand +
CDS
ATGACCAGAAATGTAGAAGAATTATTCGGCGGCGTAATCACAGCTCCCCACCAGATTCCTTTCACGTATAAATCAAATGTCGGTGGAGAAACTTTTCTTTCCTTGCCGTTCTATCCCGTCACTGGTGTTATCACAATCAACGGTGGTATGCAAGTTCCGTTAGACAACTTTGAAATCGAAGGAAATACGTTGAATCTCGGACGCGCATTGTCCAAAGGCGATGTTGTGTATTGCTTATTCGATAAAATTCTTTCACCAGAAGATACAGCCAAAGGTATCCGCATATACAAATTTCAGGCCGTAGGAGGGGAAACCGAGTTTACTCCTGATTTCACATCTTATGGAGTCCAATCTCTTTATATTGGTGGCGAGTACAAAACACCCGAAATTGAATATTCCTATAACAGCACGACAGGGAAAGTGTCTTTGCAAACTGCACTGACTGCAGGCGTTTGGGTAGTCGCTGAAATGTCTGTTAAACAACCGAATATCAGTCCGGCGTTTGACCGAAGTATTCAAGAAATCGCCCGTTCTGCTAATGTGAAAGACTCTGAAGTCATCGTTAGTACGGACACCATATCTTTGTTGGATGGGAAGAAAGTTGTTTATGACATAGCGACGCAAACCAGTTATGGTTTACCAACCATTCCTGATGGTTCTGTCATTTCTACGATCTCAGACGGGAAATTGAATTACAACCCAGGTGATGTGCAGGTTGATCTCTTACCATTACCAGATTCTTCTCAGGCGGTTAAATTATTCTATTTACAACCAAGCGGCGCAGAAAATATTAAAGTTTCCAGTGGAGACACAGTACAAGATATTCTGAATAATATCAATAAACACCGTGTCGTTGGTAGTATGGCAGAACTTTTGAATGTGTCTCCAACTGAAACGACCTTCGTGTTTGTGACTTCTTTCCACCCATCAACCAATTATGGTGGTGGTTTCTTCCGTTGGGATCCTTCTGGGAACAAGGCTGCTCACAACGGCGGCACGATCATCGATCCTGGTAAAACGTTCCCGACTTGGGACAGCGCAGGGAAGACTTCTTGGTTTACCGCAAGCGGGACAGGTACTGGAGTTTGGCGTCGTCAAGACGTGATGGGTCATTACCGCGCTGAAGACTTTGGTGCGCTTCCTTGGAACGTCGGGGACGCGCATGACAGTACCAAAGAATTCCAACAAGTGGCCAACGTGGCATATCGGGGTGGTTGCTGGAGATGGACAGGTCGCCATCGCATTACGAGTTATATTGATATTCCCAATAAACAGACTTTTGGTTCATACGCCCAAATGACTTCTGTTTATTCTGAACTATTCCAGCCCAGCAATTTCCAGGGGGTGCACGTTATTTCTGATCCTTCTTTAGCGCGTTCTGTACAAAATGCTGTCTTCTTTGATGCTGCGACTGGAGAAGCATTCCGTTGTGGTGAAGGTGCATCACCAACAGATTGTTTGGTGTACGGAAGAGGGTTTACAACTACTGGGATGGATTTGGCGACATCATTACCTTCGGCGGCTTCGTATTGTGACACCCAAGCATTCCGTCATGGAAAGGCCATTAACGTGCGAAATGTTACTGTGGCGCTTATGAAGTACGCGTTGGATTCTAATCCATGGGATGCCAGCAAAGGTGATTATTATTCCACTACGGATCATATGACGATTCTGTATTGTTATTGTATTAGTCGTGTTCCATCCGGACAGGATATAACATTCAATACCAAGCATATCAATATGCGTGCTTATGTAAACCAGATTGGCGATTATGGATTGGCGGTTCGAAATGTGGTGTTCATCGGCGGTTCGATCGAAGGGTATAACACTTCAACATACTTACGTTCCAGTACTCAACTTTCTTTCAAAGGGACATATTTTGAAACGGGAGATACAGCATTCAATGGTACTGTATTCAGTCTTGTTGGTTGGTGTACTTTGAACTTTGAAGAATGTCTCGTTTATTTGAATAATACCAAAAACTTCGTGTCTTCGGGTGGTTCAGGACAGTCTGCTGGCGTCTTAGGTTTAACAATTAAATCTCAAGGTAATGTGTGGCGCAAAACTGACGTGGGAACAACTACGGTGTTTGCAGTTGATCCGGTCACTAATAAGCAAGCCTTGCTTGGATCCGAAATATTGAATGCTGTGAGTGGGGCAACTATCGCATATTGGGCTGGTGCCGTCCCACCTGGCACATACACAGCTCCAATCAGTGTTGCATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d8fe3c14e1c21647ee668e7b29c0c7350f1060ca190f8420e960c3eed3e8a6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7197
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50