Protein

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Genbank accession
QZI90736.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLSPNEKYPGATEADPNYKDGKFKDNNPSTTNNGSPLKAVDRNEQLALQEAVMDAAGFEYNGTVDTPENSQMFAAYKAALSNGANLLSNHNFLTPSPDDSQPAPSATPTSYPPGYQIFSGVFANETSGISNLTYIDGHVSFSGGDFYMPVANTGGLERLTEFVASVADFDGKPRTRGVSFSLVGDEYRVTVSIDALEDVSATLTPLGSVKFEQGSVATVHEVGSLSVGNLSDYTYIAYKAYGGNSAVDNMIAGVPVAAETDDLVKCENGSEFKRIAVTGSLSDFEPVGEVYLADFGDDTQAFQDAANCGSLALNLPESISITEQVVLPPNVSLISKAVKAVIDTTGITTTNVNAIVKSGSISNSTTLISDVTDKSITITVNDPTGFEPGKVIFVRSTLDNSWSGTWGSANRTYRKKSSFIVTGVSGNIILLDTETNTTFEMASTVVEVLEPTTATHKNFVLKGPDNNQSRGMQVQYGYGTIFEDVDTDGFEITGLENLNCRLTKYIRPKGNIRAAAVNTQYTIAVSGSDLTEIIDGDLASTRHAVAIVGNDQCRRTTVKKSILKGSFPADAHGNADDYTYEENEIYSTSGGLKVGGRNGSWIRNKVFSENATIIAGIEIYGGTFRFYDNEFYSPSDSTFGAGWSPIDLGRGTAAITTDSRQDMLFKFYDNNVDLPGNIGSFYARVQNNSPYKVNMKFKSEDVRYPTAIDSFFRYEGTPTGGDANFATFDDIYFETTAPSLPLIKRGTGATGYNTSKVVSADYSALSS
Physico‐chemical
properties
protein length:768 AA
molecular weight: 82356,85440 Da
isoelectric point:4,58761
aromaticity:0,09766
hydropathy:-0,29023

Domains

Domains [InterPro]
DC_0205
STR
1–762
DC_0205
IPR054136
ENZ
511–700
IPR054136
QZI90736.1
1 768
Architecture
STR
STR 1-762 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI90736.1
1 768
Domain Start End Length (AA) Confidence
N-terminal 1 300 300 0,7709
Central domain 301 757 458 0,9896
C-terminal 758 768 10 0,6208
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-300
Central
301-757
C-terminal
758-768

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS15B.2
[NCBI] 		2859354 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI90736.1 [NCBI]
Genbank nucleotide accession
MW824380.1 [NCBI]
CDS location
range 18690 -> 20996
strand -
CDS
ATGTCTTTGTCACCGAATGAGAAGTACCCAGGCGCAACTGAGGCCGATCCGAATTACAAGGACGGCAAATTCAAAGATAACAACCCGTCTACCACAAATAACGGATCGCCACTCAAAGCGGTAGACCGCAACGAGCAGCTTGCACTTCAAGAAGCTGTGATGGATGCTGCCGGCTTTGAATACAACGGCACTGTCGACACTCCAGAAAACTCCCAAATGTTTGCCGCTTACAAGGCAGCGCTAAGTAATGGCGCGAATCTGTTATCAAACCATAACTTCCTAACTCCGTCACCAGACGATAGTCAGCCAGCTCCAAGTGCAACGCCAACCAGCTACCCGCCGGGCTATCAAATCTTCTCTGGTGTGTTTGCTAATGAAACCAGCGGCATTTCAAACCTAACTTATATTGACGGGCATGTTAGTTTCAGCGGTGGTGACTTTTACATGCCTGTCGCCAATACTGGCGGTCTTGAGCGCTTAACTGAATTTGTTGCTAGCGTAGCAGACTTTGACGGCAAGCCGCGCACTCGTGGTGTGTCGTTTTCGCTTGTTGGTGATGAGTATCGCGTGACGGTTAGTATTGATGCACTTGAAGATGTTAGCGCTACGCTCACTCCACTTGGCTCTGTGAAGTTTGAACAGGGCAGTGTGGCTACTGTCCATGAGGTTGGTTCGCTTTCTGTTGGTAATTTGTCTGACTATACATACATAGCTTACAAGGCGTATGGCGGTAATTCTGCTGTTGATAATATGATTGCTGGTGTTCCTGTTGCAGCGGAGACGGATGACTTAGTCAAGTGTGAGAACGGGAGTGAGTTCAAAAGAATTGCTGTCACGGGCTCTTTATCTGATTTCGAGCCAGTCGGTGAGGTCTACCTGGCTGATTTTGGTGATGACACGCAAGCATTTCAAGATGCCGCGAATTGCGGGTCTCTAGCCTTAAACCTTCCTGAGTCAATTTCCATTACGGAGCAGGTTGTTCTACCTCCGAACGTATCACTAATTTCCAAGGCGGTTAAGGCTGTAATAGATACTACAGGCATAACCACTACGAATGTTAATGCAATTGTCAAATCAGGTTCAATATCAAACTCGACAACATTGATATCCGATGTAACTGATAAATCCATAACGATAACCGTGAACGACCCTACAGGATTTGAACCCGGCAAGGTTATTTTTGTTAGGTCGACTCTGGATAATTCATGGTCAGGTACTTGGGGGTCGGCAAATCGAACGTACAGAAAGAAAAGCTCTTTCATCGTAACTGGTGTTAGTGGGAATATAATTCTCCTAGACACAGAAACAAACACTACGTTTGAAATGGCGAGCACTGTCGTTGAGGTTCTTGAACCTACGACCGCAACACATAAAAACTTCGTTCTTAAAGGTCCTGATAACAATCAATCCAGAGGGATGCAAGTTCAGTACGGTTACGGTACTATCTTTGAAGATGTTGATACTGACGGCTTTGAGATAACAGGGCTAGAAAACTTAAACTGTCGATTAACTAAATACATAAGACCTAAAGGAAATATCCGAGCCGCTGCGGTTAACACTCAATACACGATCGCAGTAAGTGGTTCAGACCTAACCGAGATTATAGACGGGGACCTAGCCTCAACACGTCACGCTGTTGCAATAGTCGGTAACGATCAATGCCGAAGAACCACCGTCAAGAAAAGCATCCTTAAAGGTTCATTCCCTGCTGACGCGCACGGTAACGCTGATGATTACACCTATGAAGAGAATGAAATATATAGCACAAGTGGAGGGTTAAAGGTCGGGGGTAGAAACGGATCTTGGATTAGAAACAAGGTTTTCAGCGAGAATGCGACCATCATAGCTGGTATCGAAATATACGGCGGCACTTTCAGATTTTACGATAATGAGTTTTACAGTCCTAGCGATAGCACGTTTGGCGCTGGTTGGTCTCCTATTGATTTAGGTCGAGGAACCGCAGCAATCACAACGGATTCCCGTCAAGATATGCTGTTTAAGTTTTACGATAACAATGTGGATTTACCGGGCAATATAGGTTCGTTCTATGCAAGAGTGCAAAACAACAGCCCATACAAAGTAAATATGAAGTTCAAGTCTGAAGATGTTAGGTATCCTACCGCTATTGACTCATTCTTCAGATACGAAGGGACTCCGACCGGTGGAGATGCAAACTTTGCAACGTTTGACGATATTTACTTTGAAACAACAGCTCCTAGTTTGCCGCTAATAAAACGAGGAACTGGTGCTACAGGTTACAATACTTCAAAAGTTGTTAGTGCTGATTATTCAGCTTTATCTAGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cd4fe6b7ed2f335047b5ba3ac7fb6d3f5bcd386b9249d28a163f16475ccbc592
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6686
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50