Protein

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Genbank accession
WWV92263.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MADLKHGSTVGGSPIWTQGNLTIQPAGDQLFYKGHKIYTAFDKPSAADFDAVSAKDGGTFQKQVHFEEGLSVGSASGGETKKNGIFKGNSDAANFDGVSWGLHSWKSIGFVNARDDVIMAYIDTTTGDFKTKGTIEGTTIKDTGQRVYSPVNKPTNNDLDLVSRQGDTITGTYNLNTVNFKLSVDSKLVARDRDFITFDAENIYYGNVLDTLVFRSKNEPKIFVNGSEGNFYHTNNKPTKADVGLGNVTNDAQVKRAGDIMEGNLQAPKMLVTTDPSGPNDLVRLSYFEKKAMVASPTIIGNVDWNTLINRGMFRVENAEAGQNKPSDSYYNGVLMVYRPEDAVGTVRVVQVYYPESINHPVCWRSCSGNSWTAWNYVDHRKLADARYVNVTGDTMTGALTVPAANGVHTAEANYNGDNCYAGLNSLNGTAMIHRVSDIKAHEKLGITHDSKIIFVKSRGNTQDTDTFELYHEGHKPTPDEVGAVPLNAVIDFGTF
Physico‐chemical
properties
protein length:496 AA
molecular weight: 54150,56240 Da
isoelectric point:5,82090
aromaticity:0,09476
hydropathy:-0,44980

Domains

Domains [InterPro]
DC_0466
STR
1–145
DC_0466 DC_1616
IPR005601
STR
57–164
IPR005601 cd19958
DC_1142
STR
105–276
DC_1142
WWV92263.1
1 496
Architecture
STR
STR
RBD
STR 1-276 | STR 292-379 | RBD 380-489 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWV92263.1
1 496
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,9431
Central domain 27 225 200 0,2024
C-terminal 226 496 270 0,7098
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-225
C-terminal
226-496

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia coli phage phiS
[NCBI] 		3129138 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWV92263.1 [NCBI]
Genbank nucleotide accession
PP449093.1 [NCBI]
CDS location
range 50411 -> 51901
strand -
CDS
ATGGCAGATTTGAAACATGGATCTACTGTAGGCGGATCTCCCATTTGGACGCAAGGAAACTTGACGATCCAGCCAGCGGGGGATCAGCTTTTCTACAAAGGTCATAAAATCTATACCGCTTTTGATAAACCTTCGGCTGCCGATTTTGATGCTGTTAGTGCTAAAGACGGTGGCACATTTCAAAAGCAGGTCCATTTTGAGGAAGGTTTAAGCGTAGGTAGCGCATCCGGTGGAGAAACCAAAAAGAACGGGATCTTTAAAGGAAATAGTGATGCGGCTAACTTTGATGGCGTAAGTTGGGGTCTGCATTCGTGGAAATCTATTGGTTTTGTTAATGCTCGTGATGATGTTATCATGGCTTATATTGACACTACCACAGGTGATTTTAAAACTAAAGGGACCATCGAAGGGACAACCATTAAAGACACTGGTCAACGCGTCTATAGTCCTGTTAATAAGCCAACAAACAATGATTTGGATTTGGTTTCCAGACAAGGCGATACAATCACCGGAACTTATAATTTAAACACGGTTAATTTTAAATTGTCGGTTGATTCTAAGCTGGTTGCGAGGGATCGGGATTTTATTACTTTCGATGCTGAAAACATTTATTATGGAAACGTTCTTGATACTTTAGTATTTCGTAGCAAGAACGAGCCTAAAATTTTTGTTAACGGTAGTGAAGGTAATTTTTATCATACCAACAACAAGCCTACTAAAGCCGACGTAGGATTGGGTAATGTCACCAATGACGCGCAAGTTAAGCGTGCTGGTGACATTATGGAAGGTAATTTGCAAGCGCCCAAAATGCTTGTGACAACCGATCCATCTGGACCTAATGATCTGGTTAGATTGAGCTACTTTGAGAAAAAAGCAATGGTAGCTAGTCCAACTATCATTGGAAATGTTGATTGGAATACCCTTATTAATCGCGGTATGTTCAGGGTGGAGAATGCCGAAGCCGGACAAAATAAACCATCTGATAGCTATTATAACGGTGTTTTGATGGTATATCGACCGGAAGATGCGGTTGGTACTGTTCGAGTTGTTCAGGTCTATTACCCTGAATCAATTAATCATCCTGTTTGCTGGCGTTCTTGTTCCGGTAACTCGTGGACCGCATGGAACTATGTAGATCACCGTAAATTGGCTGATGCTCGCTATGTTAATGTGACTGGCGATACCATGACAGGTGCGTTGACGGTTCCTGCTGCAAACGGCGTTCATACAGCCGAAGCTAACTATAATGGTGATAATTGCTACGCTGGACTTAATAGCTTAAATGGTACAGCAATGATTCATCGTGTTAGCGATATTAAAGCGCACGAGAAACTAGGAATCACACATGATTCTAAAATTATTTTCGTTAAATCTCGTGGCAATACTCAGGACACCGATACCTTTGAATTATACCACGAAGGACATAAACCAACTCCTGATGAGGTTGGCGCTGTTCCGCTCAATGCGGTAATTGATTTTGGTACTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6f2ff744672781907384523f1e08c550968a034e9f068563f088608dae5c9b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50