Protein

View in Explore
Genbank accession
AFM76115.1 [GenBank]
Protein name
central tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATDKVLKGRKGGSSSSRTPTEQPDDLQSVAKAKILVALGEGEFAGQLTGKDIYLDGTALENADGSQNFSGVTWEFRAGTQAQKYIQGIPGTENEISVGTEVSSATAWTRTFTNTQLSAVRLRLKWPSLFKQEDDGDLVGYSVNYAIDLQTDGGTWQTVLNTSVTGKTTSGYERSHRIDLPQAGSTWTIRLRKITSDANSAKIGDTMTLQSFTEVIDAKLRYPNTALLYIEFDSSQFNGSIPQISCEPRGRVIRVPDTYDPETRTYSGTWTGAFKWAWTDNPAWIFYDLVVSDRFGLGHRLTAANIDKWTLYQVAQYCDQMVPDGKGGNGTEPRYTCNVYIQDRNDAYTVLRDFAAIFRGMTYWGGDQIVALADMPRDVDYSYTRANVVGGRFTYSSSTTKSRYTTALVSWSDPGNAYADAMEPVFEQALVARYGFNQLEMTAIGCTRQSEANRKGRWGILTNNKDRVVSFDVGLDGNIPQPGYIIAVADELLSGKVMGGRISAVNGRVIKLDRVADAAAGDRLILNLPSGVSQSRTIQAVNGESVTVTTAYSETPQAEAVWVVESDELYAQQYRVISVSEKDDGTFSITGAWHDPDKYARIDTGAIIDQRPVSVIPPGNQSPPANIEISSFSVVQQNISVETMRVSWDQAQNAIAYEAQWRRNDGNWVNVPRSSTTSFDVPGIYAGRYLVRVRAINAAEISSGWGYSEEKTLTGKVGNPPKPVGFIASENVVFGIELNWGFSANTDDTLKTEIQYSLTGTGDDAMLLADVPYPQRKYQQMGLKAGQIFWYRAQLVDRTGNESGYTDWVRGQASIDVSDITDVILEEIKDSDTFKDLIENAVDSNEKIAGMADEIKNHADELEQQAKDIQENADGLAQAEVKIDEISVSIDGMTGGVKNSAIAIIQNGLAQVATRKRLSATVAGNSAQLDRIDEVIVNEKEATARALLSLQTNVNGNTASINSLSQTVSNYQQSTATQINAITATVNGHTSSITTNAQAIANVNGQLSAMYNIKVGVTSNGQYYAAGMGIGVENTPSGMQSQVIFLADRFAVTSQAGSTVSLPFVIQNGQTFINDAFFRDASIQFGKITDSLQSDNYVAGSAGWRWGKDGTMQNYGSDSSGGMKQTNVTISIRDANRLRVQIGKLTGVF
Physico‐chemical
properties
protein length:1149 AA
molecular weight: 125142,49340 Da
isoelectric point:4,89187
aromaticity:0,08616
hydropathy:-0,34865

Domains

Domains [InterPro]
DC_0014
STR
1–1149
DC_0014
IPR053171
Unmapped
5–902
IPR053171 IPR015406
IPR055385
ATT
92–218
IPR055385 IPR032876 IPR003961 Coil
IPR013783
STR
622–714
IPR013783
IPR003961
STR
623–717
IPR003961
IPR036116
STR
637–702
IPR036116
AFM76115.1
1 1149
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-218 | STR 219-342 | ATT 343-505 | STR 506-1149
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFM76115.1
1 1149
Domain Start End Length (AA) Confidence
N-terminal 1 539 539 0,8117
Central domain 540 1086 548 0,0304
C-terminal 1087 1149 62 0,8466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-539
Central
540-1086
C-terminal
1087-1149

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage mEp390
[NCBI] 		1147158 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFM76115.1 [NCBI]
Genbank nucleotide accession
JQ182729 [NCBI]
CDS location
range 14161 -> 17610
strand +
CDS
ATGGCTACAGATAAAGTGTTAAAGGGCCGCAAGGGCGGCAGCTCAAGTTCCCGAACCCCTACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGGGGAAGGGGAGTTTGCAGGGCAGCTAACCGGCAAAGATATCTACCTGGACGGAACGGCGCTGGAGAATGCCGACGGTTCCCAAAACTTTAGCGGCGTGACGTGGGAGTTTCGCGCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAAATCAGCGTAGGAACTGAGGTATCAAGCGCTACAGCATGGACGCGCACCTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTGAAATGGCCTTCGCTTTTCAAACAGGAGGACGACGGCGATCTGGTGGGTTACTCGGTCAATTATGCGATTGACCTGCAGACGGACGGCGGCACATGGCAGACGGTACTTAATACCAGCGTGACCGGCAAAACGACGTCTGGTTATGAGCGCAGCCACCGTATCGATTTACCGCAGGCTGGCAGCACCTGGACAATACGTCTGCGTAAGATTACCTCTGATGCCAACAGCGCGAAGATCGGTGACACGATGACGCTGCAGAGCTTCACCGAGGTGATTGACGCCAAACTACGTTACCCCAACACCGCGCTGCTCTACATCGAATTCGACTCAAGCCAGTTCAACGGCTCTATTCCCCAAATTTCATGCGAACCGCGCGGCCGCGTTATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTGCGTTTAAGTGGGCATGGACGGATAATCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTGACCGGTTCGGCCTCGGTCACCGTTTGACTGCTGCGAATATCGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTACCGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGAGGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTACACGCGCGCTAACGTTGTTGGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGGTTTCATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTTTTTGAGCAGGCGCTGGTGGCGCGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGTCAGAAGCGAACCGAAAGGGGCGCTGGGGTATTCTCACCAACAACAAGGATCGCGTTGTTTCGTTTGATGTCGGGCTGGACGGCAACATTCCGCAGCCGGGCTACATCATCGCCGTGGCAGACGAGCTGCTATCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCGTTATCAAACTTGACCGCGTGGCAGATGCAGCAGCGGGTGATCGCCTTATTCTCAACTTACCATCCGGAGTGTCGCAGAGCAGGACCATTCAGGCCGTAAACGGGGAATCAGTCACGGTCACCACGGCATACAGTGAGACGCCACAGGCCGAAGCTGTTTGGGTGGTTGAATCTGACGAGCTCTATGCGCAGCAGTATCGTGTTATCAGCGTTTCCGAAAAGGATGATGGCACGTTCTCGATTACTGGCGCATGGCACGACCCGGATAAATATGCCCGTATCGATACCGGAGCCATTATCGACCAGCGGCCGGTGAGCGTGATCCCGCCTGGTAACCAGTCGCCGCCTGCGAACATCGAGATCAGCTCGTTTTCCGTGGTTCAGCAGAATATCAGCGTCGAAACGATGCGCGTGAGCTGGGACCAGGCGCAGAACGCTATCGCCTATGAAGCGCAGTGGCGCCGCAACGACGGGAACTGGGTTAACGTGCCGCGCAGCTCCACAACGTCATTCGACGTCCCCGGAATTTATGCCGGGCGCTACCTGGTGCGCGTGCGCGCAATCAATGCCGCAGAAATTTCATCCGGATGGGGCTATTCAGAAGAGAAAACGCTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTCATCGCTTCTGAAAACGTGGTTTTCGGTATCGAGCTGAATTGGGGATTCTCGGCGAATACCGACGACACGCTGAAGACGGAGATTCAGTACAGCCTGACCGGGACAGGGGACGATGCGATGCTGCTGGCCGATGTGCCATATCCACAACGAAAATATCAGCAGATGGGACTGAAGGCGGGACAGATTTTCTGGTACCGCGCGCAGCTGGTCGACAGAACAGGCAACGAGTCCGGGTATACGGATTGGGTGCGAGGACAGGCCAGCATCGACGTTTCAGACATCACCGATGTGATCCTGGAGGAAATTAAAGACTCCGACACATTCAAAGATCTGATTGAGAACGCGGTGGACAGCAATGAAAAAATTGCTGGCATGGCTGACGAAATCAAAAACCATGCCGACGAACTTGAGCAGCAGGCGAAAGACATCCAGGAGAACGCTGACGGGTTGGCGCAGGCCGAAGTGAAGATAGACGAGATTTCTGTGTCGATCGACGGCATGACAGGAGGCGTGAAGAATTCGGCTATTGCCATTATTCAGAATGGGCTGGCGCAGGTTGCCACTCGCAAAAGGCTATCCGCAACGGTCGCGGGGAACAGCGCTCAGTTGGATCGTATTGATGAGGTAATCGTTAACGAGAAGGAGGCAACGGCGCGTGCTCTACTGAGCCTGCAAACGAACGTCAACGGTAATACGGCATCCATCAACAGCCTGAGCCAGACGGTTTCGAATTATCAGCAGTCTACAGCCACGCAGATAAATGCTATTACGGCGACAGTCAATGGACATACTTCCTCTATAACCACGAACGCCCAAGCCATTGCGAACGTAAACGGCCAGCTCAGCGCGATGTACAACATCAAAGTTGGGGTAACGAGTAACGGCCAGTATTACGCCGCAGGCATGGGGATCGGGGTGGAGAATACGCCATCAGGGATGCAGTCGCAGGTAATCTTCCTGGCCGACCGTTTTGCCGTTACATCCCAGGCTGGCAGCACTGTGTCCTTGCCGTTCGTGATCCAGAACGGGCAGACATTTATCAATGATGCTTTCTTCCGTGATGCGAGTATTCAGTTCGGTAAAATTACGGATTCTCTCCAGTCTGATAATTATGTTGCCGGAAGTGCTGGCTGGCGTTGGGGTAAAGACGGAACGATGCAGAACTACGGGAGCGACAGTTCCGGAGGCATGAAGCAGACTAACGTCACCATCAGCATTCGTGATGCTAACAGGCTCCGTGTTCAGATAGGAAAACTTACAGGAGTGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3316a0d1bf99d32da5eb0249288873d417c2d8d979f3501991d84c6e13faeb1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50