Protein

View in Explore
Genbank accession
YP_012792007.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,71
Protein sequence
MPIKCRTNQQAQQQADHGRKKRSWSEAERSELRKRAQQQNKLLDALREVHGDPAKEQAAAVSAKVEGYQREWQALNAELINLNPSEADRLQSYLAKNFGMIRSAFGLGDNLTTAGSVRVGLNDARRFAEGLVDVVGKYTTIGKMRDLRKELIQIGKRHNVKGRELDELFVEVVEAGQTPRTRLALGNSEAVNAWLDRRVERFNKLMKATGFSDEEVDRLVELSMQASNVFDEVRMTAQALGVHIDPINNIGYWARQLTDDAKLRLDLLWQKDGGYAKPGIGTSKHARERSTWWLIPEDYVVLSEFFTPGATKNWNKWLREATGLEQSGLDNLGKVLAKERKTKLITSQDIDEELARLVSLKTKDPTFTVADLYDKRAELVREAGGRSEAEWDALFQDPIKFLDELHNNLTAEQVDTLVDAGVLSKVPMTSREVFDYFVKQYQLPYTRMSDMFKTDVGQALQGYRESLRKAAGDSAIFKRIVDDGHRAGWIATPLEVAANPSEFKNFKRLSELDMTRFGTDEVLAEQFRGAYVHPLVHEQLEGLINLSVSPKGMHEFASTVHWFLRNIQTSALLGSNVGYVAKQVLSNTINYVAGGGHLQRIIPTAIDLIKLFRGGLDALDNTAQFRMDGGKWLTKREWYRQAMMSRGQDVVPLSAGHRIGDTYGSLGILNPANLPKAAYDVVSYAQMFGDPINGVKGALGYTGKKLERLLNTGLAPFASAATFVDLTYKFSLAQSVMKGNGFDDAVRQAHSFVSANHSKSTLREAFEHVDNYYIDYTNLGKAQLNFGRYVRPFASYALMNPPMQLRHAMRNPSAFMAYMRMSSILYGAGVRPEITEAGFSKNELDDTPAAIMYDPDSKLATVLFSANYDPIIDAYTFAKETGEKFARVTGNFAGSGWEQREDLTQKYTVRQLMEDLLGKDSNPAWKTVSEIISGRDSFTGQELDKSKRDLFGVQMPSDVVWLLSKFPLIGALDRATGGRGYIEDQFGRRVAEAEPGLLGTPNRKATRTEASDYYTEQRLSGFANNVRKLVGLRVRTIDLAEGNQYTYKDIMKARNELKKVIMAKSKSVREANRTQDPKAIQELETLRAQYIQLTVDAYRVRDWAQRNKVDIDGAFKKLQEQQQAIRGLPVPSALMERLIQDSSQELRKDYANE
Physico‐chemical
properties
protein length:1153 AA
molecular weight: 129706,40890 Da
isoelectric point:8,80118
aromaticity:0,08846
hydropathy:-0,48508

Domains

Domains [InterPro]
DC_0815
STR
1–1153
DC_0815
Coil
Unmapped
29–49
Coil
YP_012792007.1
1 1153
Architecture
STR
STR 1-1153
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage LPP-2, strain SPI
[NCBI] 		2996053 Uroviricota > Caudoviricetes > Saffermanviridae > Wumptrevirus LPP2 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012792007.1 [NCBI]
Genbank nucleotide accession
NC_111529.1 [NCBI]
CDS location
range 16782 -> 20243
strand -
CDS
ATGCCTATCAAGTGTAGAACCAACCAACAAGCACAACAACAAGCAGATCATGGACGTAAGAAACGCTCATGGTCTGAAGCTGAACGTAGTGAGCTACGTAAACGAGCACAACAACAAAACAAGCTACTAGATGCACTGAGAGAAGTACACGGTGATCCCGCTAAGGAACAAGCAGCAGCAGTGTCAGCTAAGGTTGAAGGATACCAACGCGAGTGGCAAGCACTCAACGCAGAACTCATAAACCTAAACCCAAGTGAAGCGGACAGACTACAGAGCTACTTGGCTAAAAACTTTGGGATGATCCGTAGTGCGTTTGGTTTAGGCGACAACCTCACTACTGCTGGTTCTGTACGTGTTGGTCTTAACGATGCAAGACGCTTTGCTGAGGGTCTTGTAGACGTGGTTGGTAAGTACACGACTATCGGTAAGATGCGTGACTTACGTAAAGAACTTATCCAGATCGGTAAACGACACAACGTCAAGGGACGAGAACTAGATGAACTGTTTGTCGAAGTAGTTGAAGCAGGACAGACACCAAGAACCCGCCTAGCGTTAGGCAACAGTGAAGCTGTTAACGCTTGGTTAGATAGACGTGTCGAGCGTTTCAACAAGTTGATGAAAGCTACAGGGTTTAGTGATGAAGAGGTAGATAGACTTGTCGAGTTGTCTATGCAAGCTTCTAACGTGTTTGACGAAGTACGCATGACAGCACAAGCACTTGGTGTACACATCGACCCTATCAACAACATCGGTTACTGGGCACGACAACTAACAGATGACGCTAAGTTACGTTTAGATCTCTTGTGGCAAAAGGATGGTGGCTACGCTAAACCAGGTATCGGTACATCTAAACATGCTCGTGAGCGTTCTACATGGTGGTTGATACCAGAGGACTATGTAGTACTCAGTGAGTTCTTTACACCTGGTGCTACTAAGAACTGGAACAAGTGGTTACGTGAGGCGACAGGTCTTGAGCAGTCTGGACTAGACAACCTAGGTAAAGTACTGGCTAAGGAACGGAAGACAAAACTTATCACAAGTCAAGACATCGACGAAGAGTTAGCACGGCTTGTGTCACTGAAGACTAAAGACCCTACCTTTACTGTCGCTGATCTGTACGACAAACGAGCAGAGCTAGTGCGTGAAGCTGGAGGTAGAAGTGAGGCTGAGTGGGATGCACTGTTCCAAGACCCTATAAAGTTTCTAGATGAACTACACAACAACCTAACTGCTGAACAAGTAGACACACTTGTTGATGCTGGTGTGTTGTCTAAAGTACCTATGACAAGTCGAGAGGTCTTTGACTACTTCGTTAAACAGTACCAACTACCGTACACACGTATGTCTGATATGTTCAAGACAGACGTAGGACAAGCACTACAGGGTTATCGTGAGTCACTGCGTAAAGCTGCTGGTGATAGTGCTATCTTCAAGCGCATCGTTGATGATGGACACAGAGCAGGATGGATAGCGACACCACTAGAGGTAGCAGCTAACCCGTCTGAGTTCAAGAACTTTAAGCGTCTATCAGAACTAGACATGACAAGGTTCGGTACAGATGAAGTACTAGCTGAGCAGTTTAGGGGTGCGTACGTTCATCCACTGGTACATGAACAACTAGAAGGACTCATCAACCTTAGTGTCTCACCGAAGGGTATGCACGAGTTTGCCTCTACTGTTCACTGGTTCCTCCGTAACATCCAGACATCAGCACTGCTAGGTAGTAACGTAGGTTATGTAGCTAAACAGGTGTTGTCTAACACTATCAACTACGTCGCTGGTGGTGGTCACTTACAACGCATCATCCCTACTGCTATCGACCTCATCAAGCTGTTCCGTGGTGGACTAGATGCACTAGACAACACAGCACAGTTTCGTATGGATGGTGGTAAGTGGTTGACCAAGCGCGAGTGGTATAGACAAGCCATGATGTCTCGTGGTCAAGACGTTGTGCCGTTAAGTGCAGGACACCGTATCGGTGACACCTACGGATCACTTGGTATCCTTAACCCCGCTAACTTACCTAAAGCTGCTTATGATGTTGTGTCGTATGCACAGATGTTTGGAGACCCCATCAACGGGGTCAAGGGTGCTCTTGGGTATACAGGTAAAAAACTTGAGCGACTACTGAACACAGGTCTAGCACCGTTCGCCTCTGCTGCTACGTTTGTAGACCTAACCTATAAGTTTAGTCTTGCTCAGTCAGTCATGAAGGGTAACGGCTTTGATGACGCAGTACGACAAGCACATAGCTTTGTGTCGGCTAACCATAGTAAGTCCACACTTCGTGAAGCGTTTGAACATGTGGATAACTACTACATCGACTATACCAACTTAGGCAAAGCACAGCTTAACTTCGGTAGATACGTTAGACCTTTTGCGTCGTATGCCTTGATGAACCCACCTATGCAGTTACGTCATGCTATGCGTAACCCTAGTGCGTTCATGGCTTACATGCGTATGTCGTCTATCTTGTATGGTGCTGGTGTAAGACCAGAGATCACTGAAGCAGGGTTTAGCAAGAACGAGCTTGACGACACACCAGCAGCTATCATGTACGACCCAGACAGTAAGCTTGCTACTGTACTGTTCAGCGCTAACTATGACCCCATCATAGACGCGTACACTTTTGCTAAAGAAACTGGTGAGAAGTTTGCACGGGTAACAGGTAACTTTGCTGGTAGTGGTTGGGAACAACGAGAAGACCTGACGCAGAAGTACACAGTACGTCAGTTGATGGAAGACCTACTAGGTAAGGATAGCAACCCTGCATGGAAGACAGTCAGTGAGATCATCAGCGGTCGTGACTCGTTCACTGGTCAAGAACTAGACAAGTCTAAGCGTGACTTGTTTGGTGTCCAGATGCCTTCTGATGTTGTGTGGTTGTTGTCTAAGTTCCCGCTCATCGGCGCACTAGACCGTGCTACTGGTGGACGTGGGTATATCGAAGATCAGTTTGGTCGTCGAGTAGCTGAAGCGGAGCCAGGACTACTAGGGACACCAAACCGTAAAGCCACACGAACAGAAGCAAGCGACTACTACACAGAACAACGGTTGTCTGGTTTTGCTAACAACGTACGTAAGCTTGTTGGTCTACGGGTGAGAACTATCGACCTCGCTGAGGGAAACCAGTACACGTACAAAGACATCATGAAGGCACGGAACGAACTAAAGAAAGTCATCATGGCTAAGTCTAAGTCTGTACGTGAAGCGAACCGTACACAAGACCCTAAAGCTATCCAGGAACTAGAGACACTACGAGCACAGTACATACAACTAACTGTCGATGCGTATCGAGTACGTGACTGGGCACAGCGTAACAAGGTTGATATCGACGGAGCGTTTAAGAAACTCCAAGAACAACAGCAAGCTATCCGTGGTTTGCCTGTTCCCTCTGCACTGATGGAACGCCTGATACAAGACTCATCCCAAGAACTAAGGAAAGACTATGCCAACGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
39282f66e9fbbd9fe4e46414625e7c5f301a472d3168ddcf31e945377e7aeb31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing the genomes of LPP-1, the first isolated cyanophage, and its relative LPP-2 reveal different integration mechanisms in closely related phages Shaalan,H., Cattan-Tsaushu,E., Li,K. and Avrani,S. 2023 — GenBank