Protein
View in Explore- Genbank accession
- QXN70468.1 [GenBank]
- Protein name
- putative tail fiber protein
- RBP type
-
TSPTSPTSP
- Protein sequence
-
MVTRIPIWLRVLGERIMRIKSYVDGGHAGQGIFTSQGASLTGPLILAGDPVEPMEATSKQYVDQNNQDLISQGVTAEGFVKGGVAPAVLPAFSGDVSNVQGSNVFNLPESGVMSGTYPKVEVNAKGLVVDGGSLLETDIPTLPWGKITSGRPTSVSGLGIEDLLGYEGGELTGLMEAHADPVSPKNPSTVGYIRGKAETYPDILQVGDIIEKPTIVTPFGFLKANGGLVSKEMYADLYAVIGDKFNNPLIQSNSRSWSDQYNFNFETNGNLDVWTEETPFPFDIRSSTLFTVNDYVYIKIGQKGLHLSDEIYRTKLIGGNLSTSWELVGTYPLKGHHSTVVVFKDKVYLIGNGWQQTTNKIYSSSLNSDGSISSWTVISELPYPITACKAVIYNNRLYVIGGWTGANSSNKIISSALDYDGNLLSWREETHSLEGLTGVGVCLINNKLYLFGGSTYITDVSPSKKCYYFEFDENGSLGEFTQVEDLPEVIGIGVIISTNKELYFFGGAVSEIVDSKITNDLSNKIYKNTINNDGTINDWNLAGTLPVKIDDPRLLITSKKLYIIGGTVENPLAGGSRVATSKIYSTPFQGGKDNYNQYFNEIKPTDIYDYKFRLPEFINNPKSNIYTYLKY
- Physico‐chemical
properties -
protein length: 631 AA molecular weight: 69049,96740 Da isoelectric point: 5,00657 aromaticity: 0,10618 hydropathy: -0,19144
Domains
Domains [InterPro]
DC_1413
STR
22–275
STR
22–275
IPR037053
ATT
196–265
ATT
196–265
SSF88874
STR
203–247
STR
203–247
IPR006652
STR
387–412
STR
387–412
1
631
Architecture
STR 22-195 | ATT 196-265 | STR 266-590 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
631
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 278 | 278 | 0,9935 |
| Central domain | 279 | 620 | 343 | 0,6178 |
| C-terminal | 621 | 631 | 10 | 0,2728 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-278
1-278
Central
279-620
279-620
C-terminal
621-631
621-631
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage vB_BspM_AgentSmith [NCBI] |
2836110 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QXN70468.1
[NCBI]
Genbank nucleotide accession
MW749006
[NCBI]
CDS location
range 63316 -> 65211
strand +
strand +
CDS
GTGGTTACTAGAATACCTATTTGGTTAAGAGTTTTAGGAGAACGAATCATGCGTATTAAAAGTTATGTAGACGGTGGACATGCCGGACAAGGTATCTTCACTTCACAAGGTGCAAGTCTTACTGGTCCATTGATTCTAGCTGGTGATCCAGTAGAACCTATGGAAGCTACTAGTAAGCAATATGTAGATCAGAACAATCAAGATTTAATTAGTCAAGGTGTTACTGCTGAGGGTTTTGTTAAAGGTGGAGTTGCACCTGCTGTGTTACCAGCGTTTAGTGGTGATGTAAGTAACGTTCAAGGTAGTAATGTATTTAACTTACCTGAGTCAGGTGTTATGTCTGGCACTTATCCTAAGGTAGAAGTTAATGCTAAAGGTTTAGTTGTTGATGGTGGTTCTTTACTTGAGACTGATATCCCTACGTTACCTTGGGGTAAGATCACAAGTGGTCGTCCTACCAGTGTTAGTGGTTTAGGTATTGAAGACTTACTTGGTTATGAAGGTGGTGAGCTAACAGGATTGATGGAAGCACATGCTGATCCAGTGAGCCCTAAGAACCCAAGTACTGTTGGTTACATTCGTGGTAAAGCTGAAACCTATCCTGATATTTTACAAGTAGGAGATATTATTGAGAAACCAACTATCGTGACTCCGTTTGGGTTTTTGAAAGCTAATGGTGGTTTAGTTAGTAAAGAAATGTATGCTGATTTGTATGCTGTTATTGGTGATAAGTTTAATAATCCACTAATTCAGTCTAATAGTAGAAGTTGGTCCGATCAATATAACTTTAACTTTGAGACAAATGGAAATTTAGATGTATGGACTGAAGAAACTCCTTTTCCGTTTGATATAAGATCATCAACTTTATTTACTGTAAACGATTATGTATATATAAAGATAGGACAAAAGGGGCTTCACCTATCGGATGAAATATATAGAACTAAATTAATTGGTGGGAATTTAAGTACCTCGTGGGAATTAGTGGGGACTTACCCGTTAAAAGGACATCATTCTACCGTAGTGGTTTTTAAGGATAAAGTATACCTAATAGGTAACGGCTGGCAGCAAACTACCAATAAAATTTATTCCTCTAGCTTAAATAGCGATGGATCTATTTCATCTTGGACAGTTATTTCTGAATTACCTTACCCAATTACAGCCTGTAAAGCTGTAATATATAATAACCGATTATACGTTATTGGGGGGTGGACTGGTGCTAATTCTTCTAATAAAATAATTAGCTCTGCGTTAGATTACGATGGTAATTTACTTAGTTGGAGGGAAGAAACCCATTCTCTTGAAGGTTTAACCGGAGTTGGAGTTTGTCTTATTAATAATAAACTGTATTTATTTGGTGGGTCAACCTATATAACTGATGTATCTCCATCAAAAAAATGTTACTATTTTGAGTTTGATGAAAACGGAAGCTTAGGAGAGTTTACACAAGTTGAAGATTTACCAGAAGTAATAGGAATCGGTGTAATAATTAGCACCAATAAAGAACTTTACTTCTTTGGTGGCGCTGTTTCTGAAATAGTCGATTCTAAAATTACTAATGATCTATCAAATAAAATTTATAAAAATACAATAAATAATGATGGTACTATAAATGATTGGAATTTAGCAGGTACTTTACCAGTAAAAATAGATGACCCTAGACTTTTAATAACTAGTAAGAAACTTTACATTATTGGAGGTACTGTAGAAAATCCTTTAGCGGGAGGTTCAAGAGTAGCAACCTCAAAAATATATTCTACTCCCTTTCAAGGAGGTAAAGATAATTATAATCAATATTTCAATGAAATAAAACCAACTGACATTTATGATTACAAATTTAGATTACCTGAATTCATCAATAACCCAAAATCTAATATATATACCTACTTAAAGTACTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
dd26b34f050000126e65ca1eecd026cf401a194cdb73c83093ed0ca813f6060f
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50