Protein

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Genbank accession
XWX31486.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADRPRTQASLGSQWQRVNSDNLKFDNLILAKVIKVYYQYQTVELQSLSGKMRIAQGLGTSGKFSAPYPKEFTGMTPENNPYGHIPVIVPGTLVLVAFVDGNPSNPIIVNSYGYNDLNTKLVRTPMISGDMRDNEQFKFNSSSYTLKPSLTYEYFDGEGNVVKTWNGKSLLSVTSDHNEQESSTDFMYGTLYDDLFTSRYADNSLIEPRIQRAPNMLFKHQGEFDMYGEPDNHITMFYLSSDGTFRRSTLNKEEQFRTTVEQDNKGNYRVQYQADSVIIDEGQDYVEFGIDTERQEFYVKNLDHSFRFNDDGILVDGKPLLANIDDGINDAFEKLDKLEKSMDRINDIIQDLGDRNLRELINATNKAISDVSDLTNALATTNKNVSDNKIKIDNSIIKYDKFMQDIGDYQITNNEIVNSHTTSINKINNTELPSIKLDISNIKNKIKSQYVIGDDSPTSNFTTRFQNILNEIRDNGGGTLYVLPGTYEIKSRIKIYDNTTIIMTNQTKLLRCHNGGFFDNGDLNNNVGGYDGVSNITIIGGILDNNYENIDKYPTKQINMIALRHAKNITIKDLTFRNGITVHCVDMNGSKDVMFDGCRFEGYVNLNNASYKEALQISEYVTGGIDGGIFDGTPCKNITVKNCTFSSSDILGGYDVCIGNHITANNVFNSNIKIYNNTFKDCNIAIRDWKWNDLDIHGNTFINNKECLRASSIGSSYESAKNIDGTPSNQSQATRNLIFNENKIYNFTSVGIGIYGIQDNDTAFIENVKIKDNYIKGTGQGIISSLVKDIVIEGNDIEDTYRAIKYSATKNIRVLNNTISNSKTEAIYGDVSNYGDIHSINYNSIIKHNIIDNTQKNGVFISTGDIINITDNVITNSNMINEENNKRGSIKVDYSDKCIINNNSLYGQTESFAIQATTSTNVISNNNNTNIQE
Physico‐chemical
properties
protein length:933 AA
molecular weight: 104801,29390 Da
isoelectric point:5,07790
aromaticity:0,09110
hydropathy:-0,53237

Domains

Domains [InterPro]
DC_1272
STR
235–477
DC_1272 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR012334
Coil
Unmapped
328–355
Coil IPR012334 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
458–759
IPR011050
IPR012334
STR
460–785
IPR012334
IPR011050
STR
735–928
IPR011050
IPR039448
ENZ
735–877
IPR039448
XWX31486.1
1 933
Architecture
STR
STR 235-933
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX31486.1
1 933
Domain Start End Length (AA) Confidence
N-terminal 1 460 460 0,8479
Central domain 461 922 463 0,9968
C-terminal 923 933 10 0,2545
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-460
Central
461-922
C-terminal
923-933

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_22
[NCBI] 		2815619 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX31486.1 [NCBI]
Genbank nucleotide accession
MZ417324.1 [NCBI]
CDS location
range 13350 -> 16151
strand -
CDS
ATGGCAGATAGACCAAGAACACAGGCAAGTTTAGGTTCTCAATGGCAACGAGTAAATTCAGACAATTTAAAATTTGATAACTTAATATTGGCTAAAGTCATAAAAGTTTACTACCAATACCAAACGGTAGAATTACAATCCCTAAGTGGTAAAATGAGAATAGCACAAGGATTAGGTACAAGTGGTAAATTCTCTGCACCATACCCTAAAGAGTTTACGGGAATGACACCGGAAAATAATCCTTACGGACATATACCGGTTATCGTACCCGGAACATTAGTATTAGTTGCTTTTGTTGACGGTAATCCTAGTAACCCTATTATTGTCAATAGTTATGGATATAATGACTTAAACACTAAACTAGTAAGAACACCTATGATTAGTGGAGATATGAGAGACAATGAGCAATTTAAATTTAATAGTTCATCTTACACATTAAAACCAAGTCTTACATATGAATACTTTGACGGTGAGGGTAATGTAGTTAAGACATGGAATGGTAAGTCTCTGCTATCGGTAACTAGCGACCACAATGAGCAGGAAAGTTCTACCGACTTTATGTATGGAACTCTTTATGACGACCTATTTACGAGCCGTTACGCCGATAACTCACTAATAGAGCCGAGGATACAAAGAGCACCTAACATGTTATTTAAACACCAAGGAGAATTTGACATGTATGGTGAGCCGGATAATCATATTACAATGTTTTATTTGAGTTCCGATGGTACATTTAGACGTTCTACATTAAATAAAGAAGAGCAATTTAGAACAACGGTAGAGCAAGACAATAAAGGTAACTATAGAGTACAATATCAAGCAGATAGTGTTATTATAGATGAGGGTCAAGATTACGTAGAGTTTGGTATAGATACGGAAAGACAAGAGTTCTATGTTAAAAACTTAGACCACTCATTTAGGTTTAATGATGACGGTATATTGGTAGACGGTAAACCTTTATTAGCTAATATTGATGACGGTATTAATGATGCATTTGAGAAACTAGATAAGTTAGAAAAATCTATGGATAGAATAAATGACATTATCCAAGATTTAGGTGATAGAAATTTAAGGGAACTTATTAATGCAACAAATAAAGCTATTAGTGATGTTAGTGACTTAACTAATGCCTTAGCTACAACTAATAAAAATGTTTCAGATAATAAAATTAAAATAGACAATTCTATAATCAAGTATGATAAGTTCATGCAAGATATAGGTGATTATCAAATTACTAATAATGAGATTGTTAATAGTCATACTACTAGTATAAATAAGATAAATAATACGGAATTACCTAGTATAAAATTGGATATAAGTAATATAAAAAATAAAATTAAATCTCAATATGTTATAGGTGACGATAGTCCTACTAGTAATTTCACAACAAGATTTCAAAATATATTGAATGAAATTAGAGATAACGGTGGAGGTACATTATATGTGTTACCAGGAACTTATGAAATTAAAAGTAGAATTAAGATATATGATAACACTACAATAATAATGACTAATCAAACAAAATTACTAAGATGTCATAATGGTGGTTTCTTTGATAATGGAGACCTCAATAATAATGTAGGTGGTTATGATGGTGTGTCTAACATTACTATTATAGGTGGCATATTAGATAATAATTATGAAAATATAGACAAATATCCTACTAAACAAATAAATATGATAGCTCTAAGACATGCTAAAAATATAACAATTAAAGACTTGACATTCAGAAATGGTATAACGGTTCATTGTGTAGATATGAATGGTAGTAAAGATGTTATGTTTGATGGGTGTAGGTTTGAGGGTTATGTTAATCTTAATAATGCATCATATAAAGAGGCTTTACAAATATCTGAATATGTTACTGGGGGTATAGATGGTGGAATATTTGATGGTACACCATGTAAGAACATAACTGTTAAGAATTGTACATTTAGTAGTTCTGATATTTTAGGTGGGTATGATGTATGTATAGGTAACCATATAACAGCTAATAATGTGTTTAATAGTAACATTAAAATATATAATAATACTTTTAAAGATTGTAATATTGCTATACGAGATTGGAAGTGGAATGACTTAGATATTCATGGTAATACTTTTATTAACAACAAAGAATGTCTAAGAGCATCGTCTATAGGTAGTAGTTATGAAAGTGCTAAAAATATAGACGGAACACCAAGTAACCAATCTCAAGCTACTAGAAATTTAATATTTAATGAAAATAAGATATATAATTTTACTAGCGTAGGTATAGGTATATATGGTATACAAGATAATGATACAGCTTTTATAGAAAATGTCAAGATAAAAGATAATTATATTAAAGGTACAGGTCAAGGTATTATAAGTAGTTTAGTTAAAGATATAGTTATAGAAGGTAATGACATAGAGGACACTTATAGAGCTATTAAATATAGTGCAACTAAGAATATTAGAGTACTAAATAATACAATAAGTAATTCTAAGACTGAAGCTATATATGGAGATGTATCAAATTATGGAGATATACACTCTATAAATTATAATTCTATTATAAAACATAATATTATAGATAATACACAAAAAAATGGTGTATTTATTTCTACAGGAGATATTATTAATATTACAGATAATGTAATAACTAACTCTAATATGATTAATGAGGAAAACAATAAGAGGGGAAGTATTAAAGTAGATTATAGTGATAAGTGCATTATAAATAATAACTCTCTATATGGTCAAACAGAAAGTTTTGCTATACAAGCAACAACAAGCACTAATGTAATCTCAAATAATAATAATACAAACATACAAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64c64d70f3c43cdcf8dfe86a3a82c875cc7e5a4668b88616328814c94fb902aa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8591
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank