Protein

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Genbank accession
QXO10779.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MLESILGGKHTPWVPPSMDANTLFRLVDFKATTDIVDRGPSGIVVARNGAPDVGTDDIYSYIQFTAGKYLTFTSSLLNRTNIELTWVVGEITKLTTPYSGPLLDTRPMGTNGNYHILTINQHQAAPFTMNYNYPSSSTAGLNTSIKPNDGPYVIKLQLRSTGTRILVNDAVFYGTTQTSSLDTTYMKIGRSAFYNPVPDLQLRLYFFEIKALT
Physico‐chemical
properties
protein length:213 AA
molecular weight: 23561,48240 Da
isoelectric point:7,88863
aromaticity:0,10798
hydropathy:-0,15587

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO10779.1
1 213
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,9888
Central domain 19 202 185 0,0078
C-terminal 203 213 10 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-202
C-terminal
203-213

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_48
[NCBI] 		2859283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO10779.1 [NCBI]
Genbank nucleotide accession
MW879340 [NCBI]
CDS location
range 244981 -> 245622
strand +
CDS
ATGCTTGAATCGATATTAGGGGGAAAACACACGCCCTGGGTTCCGCCGTCTATGGATGCGAACACGTTATTCAGATTGGTAGATTTTAAAGCCACTACCGATATCGTGGATCGAGGACCTAGTGGGATAGTGGTGGCGCGCAATGGTGCGCCTGATGTTGGGACGGATGATATCTATTCGTACATTCAATTCACAGCCGGTAAGTATTTAACATTCACGTCGTCGTTATTAAACCGCACTAATATTGAGTTGACGTGGGTGGTTGGAGAGATAACGAAGTTAACCACGCCATACTCTGGGCCGTTGTTGGACACACGACCTATGGGAACTAATGGTAATTATCACATCCTTACTATTAACCAGCATCAGGCCGCACCGTTTACAATGAATTATAATTACCCTTCCAGCAGCACAGCAGGGTTAAATACTTCAATTAAACCAAACGATGGTCCGTATGTTATTAAACTTCAACTCCGATCGACTGGCACTCGTATTCTGGTTAACGATGCGGTGTTCTATGGCACCACTCAGACATCATCACTGGATACGACATATATGAAAATCGGACGTAGTGCGTTCTATAATCCGGTGCCTGATCTACAGTTACGGCTGTACTTCTTTGAGATCAAAGCCCTAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
411de56c4b4e1c0bf21febfc47e95eb0d339e2ee949ded755c24567d5735beea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7977
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_48 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank