Protein

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Genbank accession
WVW77187.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYAIGTLLKGTGEDTHYQLLALIRHLCGGFGDVGAIGGTRTGTGDLSGVEASPTSVTETWTLECTAAAAGGGTFSVTGSVTGATAPATVGTAYDNGKVSFTLNDGATDFVVGDTFTIPVTQGQLAAEGQAWEILRYDTAPANRELIMKAPGLSGTEEIFLGVRTYQNFSGDYYNLLLGTFTGYVSGNSFDAQPGGRLTGVPAHNNAITYYISVNGQRLVFMLKVGTPVYTHGYIGKMYPYARPSEFPYPVVCAGILNGAQGVRFSATSNYFPYHGYTVSSNTSFYLRRPDGAWIDPAMWPFTHGSVGDSQGSQYCLAGSVSYSCQVPANAQYQIEPIILHDRVSSSNLSNNIWGELDGVYFVSGFNNAVENVVQYGGSSTVDQTGMTPLQAVQAIKAVGGRAFVMGQNINRTSWRDYVAIEM
Physico‐chemical
properties
protein length:423 AA
molecular weight: 44968,62550 Da
isoelectric point:5,11599
aromaticity:0,11584
hydropathy:-0,04515

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVW77187.1
1 423
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,7889
Central domain 12 210 200 0,4509
C-terminal 211 423 212 0,9968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-423

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_Bhz54
[NCBI] 		3097472 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVW77187.1 [NCBI]
Genbank nucleotide accession
OR797041 [NCBI]
CDS location
range 12757 -> 14028
strand +
CDS
ATGGCTTACGCAATCGGGACACTGTTGAAGGGTACCGGGGAAGATACCCACTACCAGCTGCTTGCCTTAATCCGCCACTTGTGCGGCGGCTTCGGGGATGTCGGGGCTATCGGTGGGACCCGGACTGGGACCGGCGACCTATCAGGAGTGGAGGCTTCCCCCACTTCTGTCACAGAGACCTGGACACTGGAATGCACCGCTGCCGCTGCGGGGGGCGGTACCTTCTCCGTGACAGGGTCAGTTACCGGCGCCACCGCCCCCGCCACGGTTGGGACCGCCTACGATAACGGGAAGGTAAGCTTTACCCTTAACGACGGCGCCACCGACTTTGTGGTTGGGGACACCTTCACCATCCCAGTGACCCAAGGCCAGCTCGCGGCGGAAGGGCAAGCGTGGGAGATCCTACGTTATGATACAGCTCCGGCGAATCGGGAGCTAATCATGAAAGCCCCCGGCCTGAGCGGCACGGAAGAGATTTTTCTCGGAGTACGGACCTATCAAAACTTCTCAGGGGACTACTATAACCTGCTGCTCGGGACCTTCACTGGGTATGTGTCTGGGAACAGCTTTGATGCCCAGCCTGGCGGGCGACTGACTGGAGTGCCAGCCCACAACAACGCCATCACCTACTATATCTCGGTGAACGGTCAGCGCCTGGTTTTCATGCTCAAGGTAGGTACCCCGGTGTACACCCACGGATACATCGGCAAGATGTACCCATACGCCCGGCCCTCGGAGTTCCCGTATCCTGTGGTCTGTGCCGGTATTCTAAACGGAGCACAAGGCGTCCGATTCTCCGCAACCTCCAACTACTTCCCGTACCACGGATACACCGTGAGTTCGAATACTAGCTTCTACCTGCGCAGGCCGGATGGCGCCTGGATCGACCCCGCCATGTGGCCCTTTACCCACGGCAGCGTTGGCGATTCACAAGGTTCTCAGTACTGCCTGGCTGGGTCTGTTAGCTATAGCTGTCAGGTTCCGGCCAACGCCCAGTACCAGATAGAACCCATCATTCTACACGACCGGGTGAGCAGCTCCAACCTATCGAACAACATCTGGGGCGAGCTAGACGGGGTGTACTTCGTCAGCGGCTTCAACAACGCAGTTGAGAACGTCGTCCAGTATGGAGGCAGCTCGACAGTGGACCAGACCGGGATGACCCCGCTGCAGGCTGTCCAGGCTATCAAGGCCGTTGGCGGGCGGGCCTTCGTAATGGGGCAAAATATCAACAGAACTTCGTGGCGTGACTACGTCGCAATCGAAATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
399b480ececb554d41f51ef8f8f13eb2e94a250860b60703aae080fca50120f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of new Stenotrophomonas phages Wittmann,J. and Mamat,U. 2014-01-22 — GenBank