Protein

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Genbank accession
YP_012785416.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNKLVKRRFQAGLGSEIKRVYKEGQQINTLLLAQVIQVNYKYNTVDLLALQHKEVFQNSYANEGRFSARLPMEFGGRNIVGQPYGQVNPIAVGTVVLVGFINSDKDMPIVISVYNNNDVSKQLSRTQFSNSDPKDLELIGDMHQKFSLYPSLTYDSVDGEGGRVVTFSGKSFIAFDTKEVANSSTTDAGYGTKYEDLETSYYNNGDLIEPMKGRAPNVLFKHQGVLDDDGKPDLHDLLIHINPDGTYRTSMMNKEEDWRTLFEMTPDGRVKLRKQDSINIDGGIEISELGINNEGFVYLRNGDMDLEVRKDGIYSQGKLFTADVDLSDVYDKLNGLSIQIKETNGQLEIIANGVEEQNGKISELSTEITIVAGKVESKVTKTEVQDMIDSSFVDMSDAIKKAQEDADKANKVIADMSSDNRLTPSEKIDLLKEWDIIKNEYPSYLEQAETYEVDSKDYTAKYNSLELFVTPILADMESTSSVDGATLRKTFNSYYTARIALLNSISKKLKDGITEAMKKASQASLDATQAMADASQAKIDADNANKLISDIASDNKLTPSEKYQLKKEWDVIVKEYPTTIAQAEKYAVDTAEYTAKYKALELFVEPLFKDMDETSIVDGERLRATFSDYYASKIALLKEVTDSAKTELDAYGNKISVMETNITQTSEAITLLATRVQTVEDGVQSNKAQIEIQAEQISQKVTASEVKGIVDDSINNLTLGGTNLFVIKTQTAGLLNENDGTVGTAVDNSVVSDYIKVNQKTPYIATLYGNTGTNMIITDWYDKNRTFISGEAVADSGDFSKKYVSPENAVYARVSYKKANSVNIKFEAGTKATDYSPSWEDIKGDQTALEEYIKKVEEQAKKAQQDAENAKNDAENANNAIADMSNDNMLAPNEKKQILLQWEQIKTEYPINLDQATKFGVSSQQYTTAYNALDEYLKPILADMTTTSVVVGSTLRNTFNNYYDKRTTLLNRISDVAKNVADKAQETADTINDNLQNIGGYNYVGFSSGDNMLPRLMIKNVGYYTLGSSTTEFIDSMVAVKGDATTQPFDYTVGTSDKEIAGGGLADYRMKEVKEGQWLTASANVQVIGGGSARLAIYTLEGDNWVGSNSTPIQVSDGLKRVVAQRKVTGLTKGVLIRIESADTNVKEFRFGNVQLEVGIIPTPWKKSDIDIQEDINNVVQNIKTYTAWANDLQGLDFTREKVEGKTYMYVGTSMKDSDNYSDYTWRLTDEHIEGQINGKEGAWIYSPTAPTNPSQGLIWVDLSKVPNQPKRWVDSETGWVALTPEEVKDLPWGEDGTNLADWVAQAEQRISSDSIINTVLGSEDFTSVFDTKANTTDLDNLATYEDLDSIKEDYNRLIKEGINGIDFTPYVTNSELQQLKDSFNFSVQQAGGVNMLKNSLGFSGLDFWDGTVGKNLLPNSTWNLGFGRWGGASIASFEILPPEDDKPTSHILGSIGSRSSTKEIGNRPHPLKVNSGETYTISFDYKEEALAYDKDRPILVVRNYPDKDTDQWMEYSIEGWAVMANGSTTDLTVWRRFTKTFTIGTSGYLDILPKTIVESWTHRSFWRELKIEEGSQATTWVPNKEDGAFTGGIVETTQTEELANLGFGSGFVSSKRPSSSLTQSVELPEIGANLEYSLSFYMKVTTDNPVADFKCGIRVYEGDTLTYTLGIEDATQPIPLGFQQYKLVFTPTSTSTKIEMFVENGQEASVIISGIMYNIGNIPLKWQPYPSEIYNTNVKIDINGVTVKNNQTDGYTMITPQEFSGYSRIDGNIERIFTLNGQVTEVKMLKAEKRITMEPVSVFAMNTVTDTKRIRGWAFVPSFE
Physico‐chemical
properties
protein length:1825 AA
molecular weight: 202933,23650 Da
isoelectric point:4,71709
aromaticity:0,08986
hydropathy:-0,46499

Domains

Domains [InterPro]
DC_1874
ATT
75–506
DC_1874 DC_0015 Coil DC_0336
Coil
Unmapped
399–419
Coil DC_0015 G3DSA:2.60.120.260
YP_012785416.1
1 1825
Architecture
ATT
STR
RBD
STR
RBD
ATT 75-506 | STR 526-1532 | RBD 1533-1571 | STR 1572-1717 | RBD 1718-1798 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage 53
[NCBI] 		3028143 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus sp.
[NCBI] 		35783 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012785416.1 [NCBI]
Genbank nucleotide accession
NC_111478.1 [NCBI]
CDS location
range 26929 -> 32406
strand +
CDS
ATGAATAAATTGGTAAAACGCAGATTTCAAGCAGGTCTAGGCTCAGAAATTAAAAGAGTATATAAAGAAGGACAACAAATTAATACGCTACTATTAGCACAAGTAATTCAAGTAAACTATAAATATAATACAGTAGACTTGCTAGCTTTACAGCACAAAGAAGTATTTCAAAATTCTTATGCAAATGAGGGTCGTTTCTCTGCAAGACTTCCTATGGAATTTGGCGGTAGAAATATCGTTGGACAGCCTTATGGGCAGGTTAACCCGATAGCAGTAGGAACAGTAGTATTAGTTGGTTTTATTAATTCCGATAAAGACATGCCTATTGTAATTAGTGTTTATAATAATAACGATGTAAGCAAACAGCTTTCAAGAACACAATTTTCAAATTCAGACCCTAAAGATTTAGAGTTAATTGGGGATATGCACCAAAAATTTAGTTTGTACCCTTCATTGACATATGATAGCGTTGATGGAGAAGGAGGACGTGTCGTTACTTTTTCTGGTAAATCATTTATTGCTTTTGATACAAAAGAAGTAGCTAACTCCTCTACAACTGATGCAGGTTATGGTACTAAGTATGAGGACTTAGAGACATCATACTATAATAATGGTGACCTAATAGAGCCTATGAAAGGTAGAGCACCAAATGTACTGTTTAAGCATCAAGGGGTGCTTGATGATGATGGCAAACCAGATTTGCACGATTTGCTAATTCATATTAACCCAGATGGTACTTATAGAACTTCTATGATGAACAAAGAAGAGGATTGGCGCACACTATTTGAAATGACACCAGATGGTAGAGTTAAATTAAGAAAACAAGACTCTATTAATATTGATGGTGGCATAGAAATAAGTGAGCTAGGAATCAACAATGAGGGGTTCGTTTATTTACGTAATGGGGATATGGATTTAGAAGTACGAAAAGACGGTATCTATTCACAAGGGAAACTGTTTACAGCCGATGTAGACCTATCCGATGTATATGACAAACTAAATGGGTTGTCTATACAGATTAAGGAAACAAATGGTCAATTAGAGATTATAGCTAATGGTGTAGAAGAACAAAATGGAAAAATATCAGAACTTTCTACAGAAATAACAATTGTAGCAGGTAAAGTTGAATCAAAAGTAACAAAGACAGAAGTTCAGGATATGATTGACAGTTCTTTTGTAGATATGTCTGATGCGATTAAAAAAGCACAAGAAGATGCTGACAAAGCAAATAAAGTGATTGCAGATATGTCTAGTGATAACAGGTTGACTCCAAGTGAAAAAATAGATTTATTAAAAGAATGGGATATTATAAAAAATGAATATCCAAGCTATCTTGAACAAGCAGAGACCTACGAGGTTGACAGTAAAGACTACACTGCTAAGTACAATTCATTAGAGCTATTTGTTACCCCTATATTGGCTGACATGGAATCAACTAGCTCAGTAGATGGAGCAACACTTCGCAAAACGTTTAATTCTTACTATACAGCAAGAATAGCTTTACTAAATTCTATTAGTAAAAAACTAAAAGACGGTATCACAGAGGCTATGAAAAAAGCATCCCAAGCATCACTAGATGCAACACAAGCAATGGCAGATGCCTCACAAGCTAAGATTGATGCAGATAATGCTAACAAACTTATATCTGATATAGCAAGTGATAATAAGCTGACACCTTCTGAAAAATACCAACTTAAAAAGGAATGGGATGTAATTGTTAAGGAATACCCTACAACAATTGCACAAGCAGAGAAGTACGCAGTAGACACAGCAGAGTATACAGCTAAATACAAAGCCCTAGAGCTGTTTGTAGAGCCTTTGTTTAAAGACATGGATGAAACTAGTATAGTAGATGGAGAACGCCTTAGAGCGACATTCTCGGACTATTACGCAAGTAAGATTGCTTTACTAAAAGAAGTAACGGACTCAGCTAAAACAGAGCTAGATGCCTATGGTAATAAAATATCTGTAATGGAAACAAACATTACTCAAACGTCAGAAGCTATTACTTTACTAGCTACTAGAGTACAAACTGTAGAAGATGGTGTACAATCAAATAAGGCACAAATCGAAATACAAGCTGAACAAATTAGTCAAAAAGTAACTGCTAGTGAGGTTAAAGGAATTGTAGACGATTCTATTAACAATCTAACATTAGGTGGAACTAACTTATTTGTTATAAAGACACAGACAGCAGGTTTACTAAACGAGAATGATGGAACTGTAGGTACTGCAGTAGACAACTCAGTAGTGTCAGACTACATTAAAGTTAATCAAAAAACACCATATATTGCTACACTTTACGGTAACACTGGCACAAACATGATTATAACAGACTGGTACGATAAAAATAGAACATTTATTTCTGGGGAAGCTGTGGCAGACTCTGGGGATTTTAGTAAAAAGTATGTGTCACCTGAGAATGCAGTCTATGCTAGGGTAAGTTATAAGAAAGCAAACTCTGTGAATATCAAATTCGAGGCAGGTACAAAGGCTACTGATTACAGCCCTTCATGGGAAGACATAAAAGGTGACCAAACTGCTTTAGAGGAATACATTAAAAAAGTAGAAGAACAAGCCAAGAAAGCTCAACAAGATGCTGAAAATGCTAAAAATGATGCTGAAAATGCAAATAACGCAATAGCTGACATGTCGAATGACAATATGTTAGCACCGAATGAGAAAAAACAAATACTCTTACAATGGGAACAGATTAAAACAGAGTATCCAATAAACTTAGACCAAGCAACTAAATTTGGGGTGTCTTCTCAACAGTATACAACAGCATATAACGCACTAGACGAGTACTTAAAACCAATACTAGCTGACATGACAACAACTTCTGTAGTAGTTGGCTCTACTTTAAGAAATACGTTTAACAATTATTATGACAAAAGAACTACTTTGCTAAACAGAATATCTGACGTAGCAAAAAATGTAGCAGACAAGGCACAAGAAACTGCAGATACTATCAATGATAATTTACAAAATATTGGTGGGTACAACTATGTAGGGTTCTCTTCCGGAGACAATATGTTGCCTAGACTGATGATTAAAAACGTTGGTTACTACACATTAGGTTCGTCAACCACAGAGTTCATTGACAGCATGGTAGCTGTAAAAGGTGATGCAACGACCCAACCTTTCGATTATACTGTAGGTACTTCTGATAAAGAAATTGCCGGTGGCGGTTTAGCTGATTATCGTATGAAAGAAGTAAAAGAAGGTCAGTGGCTAACAGCTTCTGCGAATGTGCAGGTAATAGGTGGTGGTTCCGCTAGATTAGCTATCTACACTTTAGAAGGAGATAACTGGGTAGGCTCTAACAGTACACCTATACAAGTAAGTGATGGTTTGAAACGTGTTGTGGCTCAAAGAAAAGTAACAGGCTTAACAAAAGGTGTGTTAATACGTATTGAGTCAGCCGACACTAATGTTAAAGAGTTTCGATTTGGTAATGTTCAACTAGAAGTAGGTATTATCCCAACTCCTTGGAAAAAGTCTGATATAGATATTCAAGAGGACATAAACAATGTTGTTCAGAATATCAAAACATACACTGCTTGGGCTAACGATTTACAGGGTCTTGATTTTACAAGAGAAAAGGTTGAAGGAAAAACTTACATGTATGTAGGTACCTCTATGAAAGATAGTGATAACTATTCAGATTATACATGGAGGTTAACTGATGAGCATATAGAAGGTCAGATTAATGGTAAGGAAGGCGCATGGATTTATTCTCCAACAGCCCCTACTAACCCATCGCAAGGGCTTATATGGGTAGACTTGTCAAAAGTACCTAATCAACCTAAGCGTTGGGTAGACTCAGAAACTGGGTGGGTTGCGTTAACACCAGAAGAGGTTAAAGATTTACCTTGGGGTGAAGATGGCACAAACCTAGCTGACTGGGTAGCACAGGCAGAGCAGAGAATATCTTCTGATAGCATTATAAATACTGTACTAGGTTCTGAGGATTTTACTAGTGTGTTCGATACAAAAGCTAACACTACTGACCTAGACAACTTAGCTACCTATGAAGATTTAGACTCAATAAAAGAGGACTATAACCGACTAATCAAAGAAGGTATAAACGGTATTGATTTTACCCCTTATGTAACTAACTCCGAACTACAACAGCTTAAAGACAGCTTTAACTTCTCTGTTCAACAAGCCGGAGGAGTTAACATGCTTAAAAACTCTTTAGGATTCTCTGGGTTAGACTTCTGGGATGGTACAGTAGGGAAGAACTTATTACCTAACTCTACTTGGAATTTAGGTTTCGGTAGATGGGGTGGCGCTTCAATCGCTAGTTTTGAAATATTACCACCAGAAGACGACAAGCCTACAAGTCATATACTGGGTTCAATAGGTTCTCGTTCTTCTACTAAAGAAATAGGTAATAGACCCCACCCATTAAAAGTTAACTCTGGTGAAACGTATACAATAAGTTTTGACTATAAAGAAGAGGCATTAGCTTACGATAAGGACAGACCTATCCTTGTTGTTAGAAACTACCCTGATAAGGACACAGACCAATGGATGGAGTACTCAATAGAAGGTTGGGCAGTAATGGCTAACGGAAGCACTACTGACTTAACTGTTTGGAGACGTTTTACAAAAACATTTACAATAGGTACTAGTGGCTACTTAGATATTTTACCTAAAACTATAGTAGAGTCATGGACACACAGGTCTTTTTGGAGAGAGCTAAAAATAGAGGAAGGGTCACAAGCTACTACTTGGGTACCTAACAAGGAAGACGGGGCGTTTACCGGTGGTATTGTTGAAACTACCCAAACAGAAGAACTAGCTAACCTCGGGTTCGGTTCGGGATTTGTTAGTTCTAAAAGACCCAGCTCTTCATTAACACAATCTGTAGAACTACCTGAAATAGGTGCCAACCTTGAGTATTCACTATCTTTTTATATGAAGGTAACTACAGACAATCCTGTAGCCGACTTTAAATGTGGTATTCGGGTTTATGAGGGGGATACTCTAACTTATACATTAGGCATAGAAGATGCAACACAGCCAATACCACTAGGGTTCCAACAATACAAGCTTGTGTTCACTCCCACAAGTACCTCTACTAAAATAGAAATGTTTGTAGAGAATGGACAAGAGGCATCTGTTATTATATCAGGTATTATGTATAATATCGGGAATATACCTCTTAAATGGCAACCATATCCAAGTGAGATATACAATACGAATGTTAAGATTGATATTAATGGGGTAACTGTTAAAAACAATCAAACAGATGGGTACACAATGATTACCCCCCAAGAGTTCTCAGGATATTCTCGTATTGATGGTAACATAGAACGTATTTTCACTTTAAATGGGCAGGTAACAGAAGTTAAAATGCTAAAGGCTGAAAAACGTATAACTATGGAACCAGTATCTGTGTTTGCTATGAATACAGTAACAGATACAAAAAGAATTAGAGGTTGGGCATTTGTACCATCATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2136331abd2ab1851f28ea4d745f822e824222d4421834752dfa6267fd73f913
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7254
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-specific immune responses impair efficacy of phage therapy targeting VRE in a murine model Berkson,J.D., Carlson,P.E. and Schubert,A.M. 2023 — GenBank