Protein

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Genbank accession
QHR75163.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MAIYRQGQASMDAQGYVTGYETKWREQLTLIRPGATIFFLTQPLQAAVITEVISDTSIRAITTGGEVVQQTNYLILLHDSLTVDGLAQDVAETLRYYQSKETEIAEAIEFFKDFDLDGLKDLVNQVKESAQQVATDRAATEQLKNDTQQIKDSALAETQKIKDDAVSETNAIKNEAQSIKDQTQQIKDSAVVEVTSIKSEAESARDGAINAKNEADNAKNYAESAKSAAESARDEAMQWAQQVNPENILHKDQNLNDLTDKAEARKVLQVQAVISNDPASHSTPGDYNSFANPQASYELRIANNGEWRVASNSDNATYALSIGAGGTGATTPDGVRHNLGLATNHIPVFLGVNLDNNNGEASGILYLRNKNAEGVQLSYSRVYNEIIGGTAKATIQVTREGGDTNYYQFDESGNAINYNTITIGRGIINSLGSNSLVIGDSDTGFKQGGDGILQTFANGRNVFTWEAYQAHLNGLLTIWPIDNNANGIRVSGSRIGGGNALIGGQVYGGAFTDWRDRASGLLVELPTDDAASSIFKAVRWGYEWVAGLDVVRYSSGGCAAHFNVRGAIFGFNDAGYASCVQWVSTSDIRLKANLKEIKGAREKVKSIKGYTYFKRSNLYEDEYSIYSEEAGVIAQDVQNVLPEAVYKISDSDYLGVSYSGVTALLVNAINEMISDSDRQEELIKKQQEEIEMLKSEINEIRNLISKLSDK
Physico‐chemical
properties
protein length:710 AA
molecular weight: 77432,64860 Da
isoelectric point:4,76256
aromaticity:0,07746
hydropathy:-0,41296

Domains

Domains [InterPro]
DC_0313
STR
1–710
DC_0313
Coil
Unmapped
215–242
Coil IPR030392
IPR030392
CHP
586–646
IPR030392 Coil
QHR75163.1
1 710
Architecture
STR
STR 1-710
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR75163.1
1 710
Domain Start End Length (AA) Confidence
N-terminal 1 453 453 0,6373
Central domain 454 652 200 0,2765
C-terminal 653 710 57 0,9835
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-453
Central
454-652
C-terminal
653-710

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage tiwna
[NCBI] 		2696449 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus tiwna
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR75163.1 [NCBI]
Genbank nucleotide accession
MN850643.1 [NCBI]
CDS location
range 29747 -> 31879
strand -
CDS
ATGGCGATTTACAGACAAGGCCAAGCGTCGATGGACGCTCAAGGTTATGTTACTGGTTACGAAACAAAATGGCGCGAGCAATTAACATTGATTCGCCCAGGTGCAACTATTTTCTTTCTTACTCAACCTTTGCAAGCTGCCGTGATCACAGAGGTGATTAGCGATACAAGCATTCGCGCCATTACTACTGGCGGTGAAGTAGTTCAGCAAACAAATTACCTGATCTTGCTTCATGACTCGTTAACGGTTGACGGGCTTGCGCAGGATGTAGCGGAAACTTTGCGTTATTACCAGAGCAAGGAAACAGAAATTGCAGAAGCAATAGAGTTTTTTAAAGATTTTGATTTGGATGGCTTAAAGGATCTGGTGAATCAAGTTAAGGAGTCTGCGCAACAAGTAGCAACAGATCGCGCAGCCACTGAGCAATTAAAAAATGACACTCAACAGATAAAGGATTCTGCCCTAGCTGAAACTCAGAAGATCAAAGATGACGCAGTAAGCGAAACTAACGCCATAAAAAACGAGGCTCAATCAATTAAAGATCAGACTCAGCAAATAAAGGACTCTGCAGTTGTTGAGGTTACAAGCATTAAATCAGAGGCTGAATCAGCTAGAGATGGCGCAATTAATGCTAAAAATGAGGCTGACAATGCCAAGAATTATGCTGAAAGTGCAAAATCAGCCGCTGAATCTGCAAGAGATGAGGCTATGCAATGGGCGCAACAAGTAAATCCTGAAAATATTCTCCATAAGGATCAAAACCTTAATGATCTTACTGATAAGGCTGAAGCAAGAAAAGTGTTGCAGGTTCAAGCGGTAATTAGCAATGATCCGGCTTCTCATTCAACGCCTGGCGATTACAACAGCTTCGCTAATCCGCAAGCAAGCTATGAATTGAGGATTGCTAACAATGGAGAATGGAGAGTTGCAAGTAATAGTGATAACGCTACATATGCGCTTTCTATTGGCGCTGGCGGTACAGGCGCAACAACTCCCGATGGAGTAAGGCACAATTTAGGGCTTGCGACAAATCATATCCCTGTATTCTTGGGGGTAAATCTTGATAACAACAACGGAGAAGCATCAGGCATTCTTTACCTTAGAAACAAGAACGCAGAAGGTGTGCAGCTTTCATACTCAAGGGTCTACAATGAAATTATAGGTGGTACAGCTAAAGCAACAATACAGGTAACAAGAGAAGGTGGAGATACAAACTATTATCAATTTGACGAAAGCGGAAACGCCATAAATTACAATACAATAACAATTGGTAGAGGCATTATAAATTCACTTGGGTCTAATTCGTTAGTTATAGGTGATAGCGACACCGGGTTTAAGCAAGGTGGGGACGGCATATTACAGACATTCGCAAACGGTAGAAATGTTTTTACATGGGAGGCATATCAAGCTCACCTTAACGGTCTTTTAACCATATGGCCTATTGATAATAACGCAAATGGCATTAGAGTTTCAGGATCTAGAATTGGCGGAGGCAATGCTCTAATTGGCGGTCAAGTATATGGAGGTGCTTTTACTGACTGGAGGGATAGAGCGTCTGGTCTTCTTGTTGAGTTGCCAACAGATGATGCAGCCTCAAGCATCTTTAAGGCCGTTCGGTGGGGTTATGAATGGGTTGCTGGTCTTGATGTTGTCAGATATAGCAGTGGAGGTTGCGCGGCTCATTTTAATGTAAGGGGTGCGATTTTCGGATTTAATGATGCTGGTTACGCCTCATGTGTTCAATGGGTCAGCACGTCAGATATTAGACTGAAAGCAAACTTGAAGGAGATTAAGGGCGCTAGAGAAAAAGTGAAGTCAATCAAGGGTTACACTTACTTTAAGCGCAGTAATCTTTATGAAGATGAATATTCTATATATTCGGAGGAGGCTGGGGTAATAGCTCAAGATGTGCAAAATGTTTTACCGGAGGCTGTTTACAAAATATCAGACTCTGATTACTTGGGTGTAAGTTATAGCGGCGTTACTGCATTGCTTGTAAATGCTATAAATGAGATGATCTCTGACTCAGATAGACAAGAGGAATTAATAAAAAAACAGCAAGAGGAAATAGAAATGTTAAAATCAGAAATTAACGAAATTAGAAATTTAATTTCAAAGTTAAGTGATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06e76464254d945159007e8e4aa6427c36ba82a9e165cb3bbb6e8aa3d619e69e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6630
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank