Protein

View in Explore
Genbank accession
AGM46957.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MFDVKDGIQISKSVVINKDKDVFAKKVTASGGAVINTGSWNKDGLRLNGAAPSIYFSQDDGSNAYLGLNGGNFYVLPDTDSNGTYSSPYILQASFSGNDFRYFGHKVYHAGNKPYFSEIIGTIDNGQLPNDITVGGNLAGYNVYAGKVGLTTNDGHGNANVTFNHRNGRPVQNGNSLRIETNVDGTSNPVFVFEAAANVTAGEAIVLSNIATLGLSEFTYKGNAVYHAGRKPTYGELGTIYHGNVDFANQYLNTGSSPTFLNGTFTGELKVENAQPWLRLNDTTGNNARIRNQSNVIYIDADNGTGNGILQIGSLRTDGILLGDTSGPYLYRSDVAKNHFSLRVGNSGAYKYLTFKGDDGTLELGGQRVLTVGSGKAVDSDKLDGVNSSQFLRSDVSDTLSANLHVTGSISFPVGDSSVGVDQEENYLRYRFGSTATAKGVRIDDYDTPVIELNRDIASDFKRGLKVSGNAVYHRGDKQDYIPTLGNQALMPTGRNALAEGIHTYGTKNNTTNTPHASKYGESIVWGSGAAGSVEVWGGWVGAGWGRLYTRALRNVTDDWSDWYEIYTSRDGVPFDKITGRTLAHMNAREGYWGLNSSTDGSNGSWIRTPSAGLLPYQSGVSSSLGASSWKFDNLHVKNGYMDNATVTGSVNAGSGNFGSLKAKNDNTNTLIIDKSSSSVYSGLQYATGGKASWLWYTSNNGTEDFSLQTRNFNTDGQYRDTVFSIDHSNAQMRFMRTGRFDESLRVDGWVLSDRVRNISGTGMYIYGGDMSSQHDAIQSKYGEGELIYLAAEGGVQILSSGDNLNNNGQAADTLTNDRRVVLCDSGGNSRFYQGTVTVDQIHAGNGQIAPSAAKLQVKGTQRTGTLYLHEGDNPGPNTEVILSSQAGGTRLRVATKDGYIDVGPQNSSYAHLTTNLDRFYFNKEIQVNGDIKVYNKLSKFTADGKNLIVGAVSNYFSRFTDAGKISRKNSGWDNNSAEVDIFKSAWMSHLGDHILIRPTGNQVNNGVIAIGREAVAIGRNSYNDPAPNSWFDVFDVDTWMSLTASSLRFQGKEAFRYDDSYLRINKGKMFSSGVHFDDSAVVTTGDMHARLFRSSYATGGAIPDGADIAYRVNNTNDNYIRFATRNNVAAWLAGDDHFVLKSTTASNSLGDSAWIAGYADANNRDHIWHDEGSNTWHFVSDSPFKAAGNSTIRSGGVISSGLSKFTGRVMFGGDGNHNGQNANLAISVGDADTGIRWNSDGNMDLMANSVAALNVTNTRVRASIDIETAAKVRSTNYDVYTGEGRGIRFWNGSDSYKIYMSGHAGSDAGRIDPSSDYNMYFKMTSGNRGFVFKNNTNNFVHLTPAKSYFKGRMEIKDSANDLEPALLVQKRADVGNGGAALLVATYGETTDIILEGRANATGTATDVTGRASTSTSGDMKFQIWASGNANFKGNVTAYGSASDITLKENIKPITNAVDKTLKLNGCTFNYIERPDDILAGVIAQDVQKVMPELVYRTPDNKLAVRYGNMAGLFVEAIKELKTENDRLKSTLDDVLARLAALEGK
Physico‐chemical
properties
protein length:1545 AA
molecular weight: 166975,96810 Da
isoelectric point:6,16438
aromaticity:0,09773
hydropathy:-0,44531

Domains

Domains [InterPro]
DC_1209
STR
333–579
DC_1209 DC_0421
IPR030392
CHP
1443–1532
IPR030392
IPR030392
CHP
1443–1496
IPR030392 Coil
AGM46957.1
1 1545
Architecture
STR
STR
STR 333-579 | STR 1140-1545
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGM46957.1
1 1545
Domain Start End Length (AA) Confidence
N-terminal 1 548 548 0,0055
Central domain 549 772 225 0,4562
C-terminal 773 1545 772 0,7329
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-548
Central
549-772
C-terminal
773-1545

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AmaP_AD45-P3
[NCBI] 		1300006 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas macleodii str. 'Balearic Sea AD45'
[NCBI] 		1004787 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Alteromonadaceae > Alteromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGM46957.1 [NCBI]
Genbank nucleotide accession
KF005318.1 [NCBI]
CDS location
range 20763 -> 25400
strand -
CDS
ATGTTTGACGTAAAAGACGGAATACAAATAAGCAAAAGTGTAGTCATTAACAAAGATAAAGATGTCTTTGCTAAAAAAGTTACAGCTTCTGGTGGGGCCGTGATAAATACAGGGTCGTGGAATAAAGACGGTCTGCGTCTTAACGGCGCTGCCCCTTCTATCTATTTTAGCCAAGATGATGGAAGTAATGCGTATTTAGGCCTTAACGGAGGTAACTTTTATGTTCTCCCTGATACTGACAGTAACGGGACCTACTCTAGTCCATACATACTACAAGCTAGTTTTAGCGGTAACGATTTTAGGTATTTCGGTCATAAGGTATACCACGCAGGTAACAAGCCTTACTTTAGTGAAATTATAGGTACTATCGATAATGGGCAACTGCCTAACGATATTACTGTGGGCGGTAATCTTGCAGGTTACAACGTTTATGCTGGTAAGGTAGGACTGACCACTAATGACGGTCATGGTAACGCAAACGTCACTTTTAACCATAGAAACGGCAGGCCTGTACAAAACGGCAACTCACTTCGTATCGAAACAAACGTAGATGGTACCTCAAACCCTGTTTTTGTTTTTGAAGCTGCGGCAAACGTTACTGCAGGTGAAGCTATAGTACTTAGTAATATAGCTACTTTGGGCCTTTCAGAGTTTACGTATAAAGGCAATGCTGTATACCACGCCGGGCGTAAACCTACTTACGGTGAACTAGGTACGATATACCACGGAAATGTAGATTTTGCTAACCAGTACTTAAACACAGGATCTAGTCCTACTTTCCTTAACGGTACCTTTACGGGAGAGTTAAAAGTAGAAAACGCGCAGCCTTGGTTAAGGTTAAACGACACTACCGGCAACAACGCTCGTATAAGAAATCAATCAAACGTTATTTACATAGACGCAGATAATGGGACAGGTAACGGCATACTACAGATAGGCAGCCTTAGGACTGACGGTATTCTTTTAGGCGATACTTCCGGCCCTTACCTGTATCGTTCTGACGTCGCAAAAAACCATTTTTCTTTACGTGTCGGTAATTCCGGTGCTTACAAATATTTAACGTTTAAAGGAGACGACGGGACTTTAGAGCTGGGCGGTCAGAGAGTTCTGACGGTTGGTTCAGGAAAAGCAGTAGATTCTGACAAACTTGACGGAGTAAACAGCTCTCAGTTTCTGCGCAGCGACGTAAGCGATACTTTATCTGCAAACTTACACGTTACTGGTAGTATTTCTTTTCCTGTAGGGGATAGCTCTGTAGGCGTAGACCAAGAGGAAAACTACTTAAGATATCGATTTGGTTCGACAGCAACCGCTAAAGGTGTGCGAATAGATGACTACGACACGCCTGTTATTGAGCTTAATCGAGACATAGCGTCAGATTTTAAAAGAGGCTTAAAGGTAAGCGGAAACGCTGTCTACCACAGAGGCGACAAGCAAGACTATATACCTACTTTAGGAAATCAGGCTCTTATGCCTACAGGCAGGAACGCGCTTGCCGAAGGTATTCACACTTACGGTACTAAGAACAACACGACTAATACTCCTCACGCCTCTAAGTACGGAGAGTCTATTGTGTGGGGTAGTGGTGCGGCAGGCTCTGTAGAAGTATGGGGAGGCTGGGTAGGCGCTGGTTGGGGCCGACTATACACAAGGGCGCTACGAAACGTTACTGATGATTGGTCTGATTGGTATGAGATATATACTAGCCGTGATGGGGTTCCTTTTGACAAGATCACTGGGCGCACACTCGCTCACATGAACGCTAGGGAAGGTTACTGGGGCCTTAACTCTAGTACTGATGGTTCTAACGGTAGTTGGATTCGCACACCTAGTGCCGGCCTGTTGCCATACCAGTCAGGCGTCTCTAGTTCTTTAGGTGCTTCTAGTTGGAAGTTCGATAACCTTCACGTTAAGAACGGGTACATGGACAATGCGACTGTCACAGGGTCTGTGAACGCTGGTAGTGGTAATTTTGGCTCTTTGAAAGCTAAAAACGACAACACTAACACCTTGATCATTGATAAGAGTTCTTCAAGTGTATATAGCGGTCTTCAATACGCAACAGGAGGTAAAGCCTCGTGGCTCTGGTATACGTCTAATAACGGTACTGAGGACTTCTCGCTCCAGACTCGTAACTTCAACACTGACGGTCAATATAGAGATACTGTCTTCAGTATTGATCATAGTAATGCTCAGATGAGGTTTATGCGCACAGGTCGTTTTGATGAGAGTCTGCGAGTGGATGGCTGGGTGTTATCAGACCGTGTAAGGAATATTAGCGGTACTGGTATGTACATCTACGGTGGTGATATGTCGAGCCAGCATGATGCTATACAGTCAAAGTACGGCGAAGGCGAGCTTATCTACCTGGCTGCCGAAGGTGGTGTTCAGATACTTTCTAGCGGAGATAACCTTAATAACAACGGTCAAGCAGCAGATACTTTGACAAATGACAGACGCGTTGTTTTGTGTGACAGCGGAGGCAACTCTCGCTTTTACCAAGGTACAGTAACTGTAGACCAGATACATGCCGGTAACGGACAGATTGCGCCAAGCGCTGCAAAGCTGCAGGTCAAGGGTACTCAACGCACAGGTACTTTGTATTTGCATGAAGGAGATAACCCAGGACCAAACACTGAAGTAATCCTTTCTAGTCAGGCAGGAGGCACTAGGTTACGAGTAGCTACCAAAGACGGGTATATAGATGTAGGTCCGCAAAACAGCAGTTACGCACATCTTACTACTAATTTGGATAGATTTTATTTTAATAAAGAGATCCAAGTTAACGGTGATATTAAAGTTTATAACAAACTGTCAAAATTTACCGCTGACGGGAAGAATCTAATCGTCGGGGCTGTTTCTAATTACTTCTCGCGTTTTACTGACGCAGGTAAGATATCCAGAAAAAACAGCGGTTGGGATAACAACTCTGCTGAAGTCGACATATTCAAATCAGCATGGATGAGTCATTTAGGCGACCACATACTGATACGTCCTACAGGCAATCAGGTAAACAACGGCGTTATAGCTATCGGACGAGAGGCTGTCGCTATAGGCAGAAATTCATACAATGACCCTGCCCCAAACAGCTGGTTTGATGTATTCGATGTAGATACTTGGATGAGTCTTACTGCGTCGTCTTTACGTTTCCAAGGCAAAGAAGCTTTTAGGTATGATGACAGCTACCTTAGAATCAACAAAGGTAAAATGTTTAGCTCAGGCGTACATTTTGACGATAGCGCTGTAGTCACTACTGGAGACATGCATGCCCGTTTGTTTAGAAGCTCTTACGCTACTGGTGGTGCTATACCTGATGGAGCAGATATCGCTTATCGCGTAAATAATACCAATGACAACTACATCAGGTTTGCTACACGAAACAATGTCGCTGCTTGGCTGGCAGGAGATGACCACTTTGTGCTGAAGTCTACTACAGCTTCTAACTCTCTTGGCGACAGCGCTTGGATAGCTGGTTACGCTGATGCAAATAATCGCGACCATATTTGGCATGATGAAGGTAGTAACACATGGCACTTTGTATCTGATTCGCCTTTTAAGGCTGCAGGTAACTCAACCATACGCTCAGGTGGCGTCATATCAAGCGGTTTGTCTAAGTTTACCGGCAGAGTGATGTTTGGCGGTGATGGTAACCATAACGGTCAAAACGCTAACCTAGCAATCTCTGTAGGTGACGCCGACACAGGTATTCGTTGGAACAGTGACGGTAACATGGACTTGATGGCGAACAGTGTTGCCGCTTTAAATGTTACTAATACTCGCGTAAGAGCTTCTATAGACATAGAAACTGCGGCTAAAGTAAGGTCGACTAATTACGATGTTTACACTGGCGAGGGTAGGGGTATCCGTTTTTGGAACGGATCTGACAGTTATAAGATTTACATGTCTGGGCATGCTGGTAGTGATGCAGGAAGAATAGACCCTTCTAGCGACTACAACATGTACTTTAAAATGACTAGCGGGAATCGAGGGTTTGTGTTTAAGAATAACACTAACAATTTTGTGCACCTTACTCCTGCTAAAAGTTATTTTAAAGGCCGCATGGAAATTAAAGATTCGGCTAATGACCTTGAACCTGCACTGCTAGTGCAAAAAAGAGCTGATGTAGGTAACGGAGGTGCTGCACTGCTAGTAGCTACCTACGGCGAAACTACTGATATTATTTTAGAAGGCCGGGCTAACGCTACAGGTACTGCTACTGACGTTACAGGTAGGGCTTCTACTAGCACATCTGGAGACATGAAGTTTCAGATATGGGCTAGCGGCAATGCTAACTTTAAAGGGAATGTTACTGCTTACGGAAGCGCTTCTGACATTACTCTTAAAGAGAACATAAAGCCTATCACTAATGCTGTAGATAAAACGCTCAAGCTTAATGGCTGTACGTTTAACTACATAGAACGTCCTGATGACATTCTTGCAGGTGTTATTGCTCAAGACGTACAGAAGGTGATGCCAGAACTAGTGTACCGCACACCGGACAACAAGCTGGCTGTTCGTTACGGTAATATGGCAGGTCTTTTTGTTGAGGCTATTAAAGAGCTTAAAACAGAAAATGACAGACTTAAAAGCACCCTAGATGACGTGTTAGCGCGACTAGCTGCTTTGGAGGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa19f871d68503b1ee21ee3469ae581ecb0853dc7755ee43c7fd5edaf1b09f8a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4764
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50