Protein

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Genbank accession
QCW20496.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MDIIKLVADGFPLTIERLLFVQNAYKKAIGELASGITGNGVILQGVVNNTGAVSSGIIVTPSGEVIAFDASAFDARVAIFETVTQVPYNIDTNNDGNLDLRDSDVLRVARCAPTGGVDAFNFSDLKRVSNLKNLLPIGIVLPYDGQETDILPAGWEFYNLADRFIMGASRANQAGDLGGSNTVIIEKINLPNYAMTGNTSSSGAHVHWGHNQAASGDWRSGGHNSAPNSTSVYGNTGSAGEHTHSFSVNLGGGGQAIDIQPAFKAMLFIKFVGF
Physico‐chemical
properties
protein length:274 AA
molecular weight: 28861,96100 Da
isoelectric point:5,12394
aromaticity:0,08394
hydropathy:0,02263

Domains

Domains [InterPro]
cd22641
STR
8–192
cd22641
SSF88874
STR
132–269
SSF88874
QCW20496.1
1 274
Architecture
STR
STR 8-269 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FPSV-S8
[NCBI] 		2575352 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium psychrophilum FPS-S2
[NCBI] 		164330 Pseudomonadota > Betaproteobacteria > Rhodocyclales > Zoogloeaceae > Thauera >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW20496.1 [NCBI]
Genbank nucleotide accession
MK764445 [NCBI]
CDS location
range 8633 -> 9457
strand +
CDS
ATGGATATTATAAAATTAGTTGCCGACGGCTTCCCTTTGACTATCGAGAGGCTGTTATTTGTTCAAAACGCGTATAAAAAAGCTATCGGCGAGCTTGCCAGTGGTATAACTGGTAACGGCGTAATTTTGCAAGGTGTTGTTAATAATACTGGTGCGGTTTCTTCGGGTATAATCGTAACGCCTTCAGGCGAAGTTATCGCCTTTGATGCTTCGGCTTTTGATGCAAGGGTCGCAATTTTCGAGACTGTTACGCAAGTACCTTATAACATCGACACAAATAACGACGGTAATCTCGATTTGAGAGACAGCGACGTTTTACGTGTTGCTCGATGCGCACCAACTGGCGGGGTCGATGCTTTTAACTTTTCAGATTTGAAAAGAGTATCTAATTTAAAAAATCTATTGCCTATCGGTATTGTATTACCTTACGACGGGCAAGAGACCGACATTTTACCCGCTGGCTGGGAATTTTACAACCTCGCAGACCGTTTTATTATGGGAGCTAGTAGGGCAAACCAAGCGGGCGACCTTGGCGGCTCAAATACCGTAATAATTGAAAAAATAAACTTACCAAATTACGCAATGACTGGTAACACCTCTTCGAGCGGTGCGCACGTACATTGGGGACATAACCAAGCAGCGTCGGGCGACTGGAGGAGCGGCGGTCATAATTCCGCGCCAAATAGTACAAGTGTTTACGGTAACACGGGGTCGGCTGGTGAGCATACGCATAGTTTTAGCGTTAATTTAGGAGGCGGCGGGCAAGCTATCGACATTCAACCAGCTTTTAAAGCGATGTTATTCATTAAATTTGTCGGCTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a5a8079f4e751622cda23268dc5cd475b171d66df17331c9cd0d84289111f90c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7945
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Host range and genomic characterization of Flavobacterium psychrophilum phages Castillo,D. Sr., Jorgensen,J., Sundell,K. and Middelboe,M. 2014-02-21 — GenBank