Protein

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Genbank accession
YP_009188588.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MTAPWYSRGPKGDKGDKGDTGTGVQGPPGPANVLTAGPVTTLAPGEDAAIDLVTTSPGNQRLDASIPRGAKGDKGDQGNVGPASALSLGTTNTGAPGTNAIVELSGSAPSQVISFTIPRGSKGDQGNQGDIGPEGPRGYGYFANAGVPTVTEPSGPPDDDLVWYLDTITGEFWIWVETTPGTKAWVHQPARGSLKGAKGDQGLPGGKGDKGDQGDPGPANSLAIGTVTGLGTGATPTASITGAAPSQTLNLGLPAGPKGDKGDKGDPGDDGEVSEAMLNTAVNNAVAALVDGSPAALDTLNELAAALGDDPNFATTMTNALAEKVGNTDSRLADSRTPTDGSVTQAKLAPNGGFFNKLNLSDLTAPGYTFGKGNWIVVDDSDPNPANHFMMYIVYGANQGESPGDASARGIMTPVIVNVGSALSFANGTIDVFDSGITSAKINGGAVTAAKIAGGVLPMDMSFIVFGKDTTRAAGTGDNPFGHKFQRNVTVQSVTFRCLTADASGNLVVEICKNGTAVSGTNTTLSAANQVGGVTTSGLSATFSAGDIITIQVTGVGTTPGKGLVADIKAVAS
Physico‐chemical
properties
protein length:573 AA
molecular weight: 57184,56410 Da
isoelectric point:4,57488
aromaticity:0,05061
hydropathy:-0,19721

Domains

Domains [InterPro]
IPR050149
Unmapped
9–271
IPR050149 DC_2071
DC_1769
STR
28–85
DC_1769 DC_0577
DC_1769
STR
79–190
DC_1769
YP_009188588.1
1 573
Architecture
STR
RBD
STR 28-480 | RBD 481-573
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA3
[NCBI] 		1647284 Uroviricota > Caudoviricetes > Gamtrevirus >
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009188588.1 [NCBI]
Genbank nucleotide accession
NC_028668 [NCBI]
CDS location
range 31495 -> 33216
strand +
CDS
ATGACAGCTCCGTGGTACTCCAGAGGCCCGAAGGGCGACAAAGGAGACAAGGGCGATACCGGAACCGGCGTCCAGGGTCCGCCCGGTCCTGCAAACGTGCTCACTGCTGGCCCGGTAACAACGCTTGCTCCCGGCGAGGATGCAGCTATTGATCTGGTTACTACTAGTCCCGGTAACCAGCGACTTGACGCATCTATTCCACGCGGGGCAAAGGGTGACAAGGGTGATCAGGGAAATGTCGGTCCGGCTAGCGCGCTCTCGTTGGGCACGACTAATACCGGCGCTCCTGGAACAAATGCCATTGTTGAATTGAGTGGCAGTGCTCCGTCTCAGGTTATCTCATTCACCATTCCACGAGGCAGCAAGGGTGATCAGGGAAATCAGGGTGATATAGGTCCGGAGGGGCCGCGAGGCTACGGCTATTTTGCTAATGCAGGTGTGCCAACTGTTACCGAGCCAAGCGGACCGCCTGATGACGACCTTGTCTGGTATCTGGACACCATCACTGGTGAATTTTGGATTTGGGTAGAAACCACTCCTGGAACAAAAGCGTGGGTTCATCAGCCAGCTCGCGGAAGCCTAAAGGGCGCAAAGGGTGATCAGGGTCTCCCCGGCGGGAAGGGGGATAAGGGTGACCAGGGCGATCCTGGACCGGCGAATTCGCTTGCAATTGGAACGGTCACTGGACTTGGAACCGGGGCAACGCCTACCGCGAGCATTACCGGTGCCGCGCCGTCCCAGACCCTTAATTTGGGACTGCCTGCTGGCCCAAAGGGCGACAAGGGCGATAAGGGCGATCCTGGAGACGACGGGGAAGTGTCGGAGGCAATGCTTAACACGGCGGTCAATAATGCTGTGGCGGCATTGGTTGACGGCTCCCCCGCCGCGCTGGACACGCTAAATGAATTGGCAGCGGCTTTGGGCGATGATCCAAATTTCGCAACCACCATGACGAACGCTCTTGCGGAAAAGGTCGGGAATACAGACAGCCGCTTGGCCGATAGCCGGACCCCTACCGACGGCTCGGTTACTCAGGCAAAGTTGGCTCCAAATGGCGGATTTTTCAACAAGCTAAATTTGAGTGATCTTACTGCACCTGGTTACACATTTGGCAAGGGAAATTGGATCGTTGTCGATGACAGTGATCCAAATCCCGCAAATCACTTCATGATGTACATTGTGTATGGAGCAAACCAGGGTGAGTCGCCTGGAGACGCTTCTGCGCGTGGGATTATGACTCCGGTAATTGTAAACGTAGGCTCTGCGCTTTCGTTTGCCAATGGCACCATTGATGTCTTTGACAGTGGTATTACCTCTGCCAAGATCAACGGCGGTGCGGTAACAGCGGCCAAGATCGCTGGCGGAGTTCTTCCGATGGACATGTCATTTATTGTGTTCGGCAAGGATACAACGCGAGCGGCGGGGACCGGCGATAATCCTTTTGGTCACAAGTTCCAGAGAAACGTAACGGTTCAGTCTGTAACGTTTCGATGCCTAACCGCTGATGCCTCTGGAAATCTGGTAGTCGAAATTTGCAAGAACGGAACAGCAGTAAGCGGAACGAATACCACGCTTTCGGCAGCCAATCAGGTTGGCGGGGTTACCACCAGTGGCCTGTCTGCAACCTTTTCTGCTGGAGATATCATCACAATTCAGGTAACCGGCGTTGGCACCACTCCTGGCAAGGGTCTGGTCGCAGATATCAAGGCGGTTGCTTCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9028c9e0ed6806b92b74d4347e93e5236c596dedc8997ca5ecf53ec175fc559
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7142
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50