Protein

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Genbank accession
WVO01518.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MTISFNNGSISSCNSAGAKFHINSAGHLIVTYADNTIDDLGLVVGHDGTNGTNFYPNLIGFEIPDGSFEVDKPIGWTYLSLANGKAILYFKTSEPGIRPATWNIEEFGRGPKGDSGRPFTIDDSGTTLPTTNLFDEYTFYNTEDGNIYIYDLDTTDWRGPFPFRGPQGLRGRFIIDSQGEDFPQISNLPVDYTFYNSKTGYLYYVEENEVTNQKQWSEGILFRGEKGEKGDSIKGDPGKDGKDIKVIVNTIDTSYTNALLVVGTCPAGYVVTNIQVDVLQPYNNDVTDMLVRFGGTVQSEIDGTVIAPYDYFDIRTTQRYIVNEVNHQVSDKDEILSCIFNESVNNSTTGKINIIITIAYQSPIEPISDHI
Physico‐chemical
properties
protein length:371 AA
molecular weight: 41127,00120 Da
isoelectric point:4,42301
aromaticity:0,11590
hydropathy:-0,35849

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01518.1
1 371
Domain Start End Length (AA) Confidence
N-terminal 1 351 351 0,7272
Central domain 352 360 10 0,0021
C-terminal 361 371 10 0,8917
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-351
Central
352-360
C-terminal
361-371

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01518.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 200633 -> 201748
strand -
CDS
ATGACAATTTCATTCAATAATGGGTCAATTAGTTCATGTAATAGTGCTGGAGCAAAGTTCCACATTAACAGTGCGGGTCACTTAATTGTAACTTACGCTGATAACACTATCGATGACTTAGGTCTTGTTGTTGGTCATGATGGTACTAACGGTACTAACTTTTATCCAAATCTAATTGGATTTGAGATTCCTGATGGTTCGTTTGAAGTTGACAAACCAATTGGTTGGACTTATTTGAGTTTAGCTAATGGTAAAGCAATACTCTACTTTAAAACCTCAGAACCGGGTATCCGTCCTGCAACTTGGAACATAGAAGAGTTCGGTCGTGGGCCAAAAGGTGATTCTGGGCGTCCATTTACAATTGACGATTCAGGTACTACATTACCAACAACAAATCTATTTGACGAATACACCTTCTATAATACAGAAGATGGGAATATCTACATTTATGATTTAGATACCACTGATTGGCGTGGGCCATTCCCTTTCCGTGGGCCACAGGGTTTACGTGGTAGATTTATTATCGATTCACAAGGTGAAGATTTTCCACAAATTAGTAATCTACCAGTTGATTATACATTCTATAATTCAAAAACTGGATACTTATACTACGTAGAAGAAAACGAAGTAACCAACCAGAAGCAATGGAGTGAAGGGATTCTCTTCCGTGGTGAGAAAGGTGAAAAAGGTGATAGCATCAAAGGTGATCCGGGTAAGGATGGTAAAGATATTAAAGTTATCGTTAATACCATCGATACAAGCTACACTAACGCATTACTTGTAGTAGGTACATGTCCTGCTGGATATGTTGTCACTAATATTCAAGTTGATGTATTACAACCATACAACAATGATGTTACTGATATGCTAGTTCGCTTCGGTGGCACGGTTCAATCGGAAATCGATGGTACTGTAATTGCACCTTATGATTACTTCGACATTCGGACAACACAACGTTACATTGTAAATGAAGTAAATCATCAGGTTAGTGACAAAGATGAGATCCTTTCTTGTATTTTTAACGAATCCGTAAACAACAGTACAACTGGTAAGATTAATATCATCATCACGATTGCATATCAATCTCCAATTGAACCGATCTCAGATCATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7fe6eafab2457eb3e35655a03132fdf62a8427af6499e53068b09849960f0914
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7657
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank