Protein

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Genbank accession
USL87110.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MDIDIKKNGKVRVLDTPYFKPITQTNISFSNMDIGTAKITFELLKNSLPLQVSEKNVDVYSYLESKNGSSIEVPLHFEDPLNGIVSMTIDKDFLEASTNSTVEGQLYITMNKKNKTYNDYSNTVALQKFSFAVEDALINKISGSDKIFYIRSFDILKSEIKNKIYEMEQDIGKIEQVKKELETLFYEVKEEINQIRKDTINQLQSEYTEYSELLNDIHNQALTDIDNRTKVSLNQIDNRKEEVLQLLEEGEIVTKTMFEEYKSDIKDQLDEALLKNQNEIKSYKDDLQSTIDNLNWQKHKLTTDEGNIISISDTVDMNTLGRLDKTGFYYCSNITNAPDGESTTGYINVYNQSSTLGFAYFINQDGQTIYTNTKNNGTWGSWQSISKDQIKDLNWQKYKITEDDGSRQWLGTLDKPVEKLSAGSYECTIPSNAGVVNAPSDVNGSAYLAEIDVTVGANGRKQIFLIQNYTKDIWLKTIHTNGADRGWVLVNRDYEKDLDWQKYKMVDDNGKNYTVDCKNNGTTLHNLAPKHYYLTNVPDLPSGVGKDGMALVISDNTDKNGRIIYSPQSSSDVYMKNKVMGNWSPFVKVTTNYSSTGWQDLPLTNGIQEYSSSYKPQFKLVEMNDMIMFSLRGAIKNVTSSRQMFAQIPPYILRKLVPPHPYVQSGSVKNGEATFIRLSIERNGEVGIIAFSKPNEMSASDFYPIDTTIVI
Physico‐chemical
properties
protein length:711 AA
molecular weight: 80786,75820 Da
isoelectric point:5,07313
aromaticity:0,09564
hydropathy:-0,56470

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
17–140
G3DSA:2.60.40.3350 Coil Coil Coil cd19958 DC_0244
IPR018913
ATT
21–161
IPR018913 DC_0196
DC_1216
STR
58–392
DC_1216
USL87110.1
1 711
Architecture
ATT
STR
ATT 17-161 | STR 162-711
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL87110.1
1 711
Domain Start End Length (AA) Confidence
N-terminal 1 374 374 0,9796
Central domain 375 577 204 0,0261
C-terminal 578 711 133 0,9563
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-374
Central
375-577
C-terminal
578-711

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Sazerac
[NCBI] 		2944657 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL87110.1 [NCBI]
Genbank nucleotide accession
ON550478 [NCBI]
CDS location
range 21473 -> 23608
strand +
CDS
ATGGATATAGATATTAAAAAGAATGGCAAAGTACGTGTGTTAGATACACCGTACTTTAAGCCAATCACACAAACAAACATTTCTTTCTCTAATATGGATATTGGAACTGCTAAAATAACATTCGAATTATTGAAAAACAGCCTACCCTTACAAGTTAGCGAAAAGAATGTTGACGTTTATAGTTACTTAGAAAGTAAGAATGGTAGCAGTATAGAAGTACCTTTGCATTTTGAAGATCCATTAAATGGTATTGTTAGCATGACGATTGATAAAGATTTCTTAGAGGCTTCTACAAACTCAACTGTAGAAGGTCAACTATACATAACAATGAACAAGAAAAACAAAACATATAATGACTACTCTAACACTGTAGCATTACAAAAATTTAGTTTTGCTGTTGAGGACGCTTTAATTAATAAAATTAGTGGTAGCGATAAGATATTCTATATTAGATCTTTCGACATTTTAAAATCTGAAATCAAAAACAAAATTTATGAAATGGAACAAGACATCGGCAAAATTGAGCAAGTTAAGAAAGAACTTGAAACACTATTTTATGAAGTTAAAGAAGAAATCAATCAAATCAGAAAAGACACTATTAATCAATTGCAAAGTGAATATACAGAATATAGCGAGCTGTTAAATGACATTCACAATCAAGCGTTGACAGATATTGACAATCGTACAAAAGTTTCACTTAATCAAATTGATAATAGAAAAGAGGAAGTCCTTCAATTATTAGAAGAAGGCGAGATTGTTACAAAAACAATGTTTGAAGAATACAAGTCAGATATTAAAGATCAATTAGACGAAGCATTGTTGAAAAATCAAAATGAAATTAAATCATATAAAGATGATCTTCAAAGCACAATAGACAACTTAAATTGGCAAAAACATAAACTGACAACTGACGAAGGTAACATAATCTCTATTTCTGATACTGTAGATATGAACACGTTGGGACGTTTAGATAAAACAGGTTTTTATTACTGTTCAAACATCACAAATGCGCCTGACGGAGAAAGCACAACAGGTTATATAAATGTTTATAACCAAAGTTCTACTTTAGGTTTTGCTTATTTTATAAACCAAGACGGACAAACAATATACACCAACACTAAGAACAATGGAACATGGGGTAGTTGGCAATCCATAAGTAAAGATCAAATCAAAGATCTTAATTGGCAAAAATACAAAATTACAGAAGATGACGGATCAAGACAATGGTTAGGTACATTAGATAAACCAGTAGAAAAACTATCTGCTGGATCGTACGAGTGTACTATACCGTCTAATGCTGGAGTAGTTAACGCGCCTTCTGACGTTAACGGAAGTGCATATCTAGCAGAAATAGACGTCACAGTTGGTGCAAATGGAAGAAAACAAATATTTTTAATACAAAACTATACAAAAGATATTTGGTTAAAGACTATACATACTAATGGTGCTGATAGAGGTTGGGTTTTAGTAAATAGGGATTACGAAAAAGATTTGGATTGGCAAAAATATAAAATGGTTGATGACAACGGAAAAAACTATACGGTAGATTGCAAAAATAATGGAACGACATTACATAATTTAGCTCCTAAACATTATTACCTTACTAATGTACCTGATCTACCAAGCGGAGTAGGGAAAGACGGTATGGCTTTAGTTATATCCGATAATACAGATAAAAATGGACGTATCATTTATTCTCCGCAATCATCATCAGATGTTTATATGAAGAACAAAGTTATGGGTAATTGGTCGCCGTTCGTTAAGGTTACAACTAACTACAGTTCTACTGGTTGGCAAGACTTGCCACTCACAAATGGTATACAAGAATATTCAAGCAGTTATAAACCTCAATTCAAATTGGTAGAAATGAACGACATGATAATGTTTTCTTTAAGAGGTGCTATAAAAAATGTTACAAGCTCAAGACAAATGTTTGCGCAGATACCACCTTATATACTAAGAAAGTTAGTGCCACCGCACCCTTATGTGCAATCGGGAAGCGTTAAAAACGGAGAAGCTACATTCATTCGTTTAAGTATCGAAAGAAACGGAGAGGTCGGTATCATTGCATTTTCAAAACCTAATGAAATGAGCGCGTCAGACTTTTATCCAATTGATACAACAATAGTAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e24dee4dedd656266b26072e623f59998858e659512c63e8d675a47bb7fc1aef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7853
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50