Protein

View in Explore
Genbank accession
WYW04303.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAAEYLASNEFPGDGVTTLYNVSFKGNRPDAGSGVVPYLNTADVKAQLITPATSTTAEVVEDVPIVYVGPNQFRVTPAAPVGKIVRIYRATQDDYALVDYQSLQTVSEADLDLSNRQLVFIVQESRDLATRADVDATSAVELAYEAINTANDAATLAAAASASADNAVGLANAAVNSANLAVSTANAAAALAQSASNAAADAIAAANSVVGIANGAVTTANAAQSTANGAVNTANTALAVANGIASTAQAALDAATLATSTANNALSVANGIAGTAQAALDAANAANVIAEDADDTANNALSVANGIASTANTALTNSNTAITTANGAVSTANAAQTTANAALARSGGTMTGPIVLAADATAALHPVTKQQFERSPGYAAGSGVHGAQRNVIHNGEMVVWNRGASHAINGTQEKFTADRWRVQVNLGSGGATTSVQLATEGEGPFQASRAYNYARISGNVTGASGYILFRQPIIDLRKYAGNYTLSFWARRSHAVKCGVRISQVFGDGGSAPVSVGKTFTFAAANTWQLVTLTFNLPSMSGKTHSGTARLELSFEPEVGNTALGTSITGYTGESVGWGSGSSAGTFDITCVQLEAGTVATPFEMRPYQDTLLDCLRYFSPTQRSIWGGYGAPGAGVWNFMPFFTKMVRAPTRNNISVVEQANAVDTIISSASELGFRTTNAVPTVAGFRVQADYNADADYYSPD
Physico‐chemical
properties
protein length:704 AA
molecular weight: 72064,67870 Da
isoelectric point:4,87755
aromaticity:0,07102
hydropathy:0,02003

Domains

Domains [InterPro]
DC_1152
ATT
13–109
DC_1152 DC_0568
IPR005604
ATT
36–130
IPR005604 G3DSA:2.60.120.260
DC_1152
ATT
104–210
DC_1152
WYW04303.1
1 704
Architecture
ATT
STR
ATT 13-210 | STR 245-702 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Kurepalu-1
[NCBI] 		3132680 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW04303.1 [NCBI]
Genbank nucleotide accession
PP496476.1 [NCBI]
CDS location
range 1 -> 2115
strand +
CDS
ATGGCCGCTGAATATCTCGCGTCTAACGAGTTTCCCGGCGACGGTGTGACTACCCTGTACAACGTCAGCTTTAAGGGCAACCGCCCCGATGCAGGCAGCGGCGTGGTGCCATACCTCAATACCGCCGACGTGAAGGCGCAACTCATCACTCCCGCGACCTCGACTACCGCTGAGGTAGTGGAGGACGTGCCAATCGTATACGTTGGCCCGAACCAGTTCCGCGTCACGCCAGCCGCGCCGGTTGGCAAGATCGTGCGGATCTACCGGGCCACCCAAGACGACTACGCTCTGGTGGACTATCAGTCGTTGCAGACCGTGAGCGAGGCCGACCTCGACCTGTCCAACCGACAGCTCGTGTTCATCGTTCAAGAGTCCCGCGACCTCGCCACTCGTGCCGATGTGGACGCTACCTCGGCTGTGGAGCTGGCCTACGAGGCTATCAACACCGCCAACGACGCCGCCACCCTCGCCGCTGCTGCCTCTGCTTCGGCAGACAACGCAGTCGGGCTGGCCAACGCCGCCGTAAACTCGGCGAACCTCGCCGTATCCACGGCCAACGCCGCCGCTGCACTGGCGCAGTCCGCGTCCAACGCAGCTGCTGACGCCATCGCCGCTGCCAACTCGGTGGTGGGCATCGCCAACGGGGCTGTCACCACGGCCAACGCCGCGCAGAGCACCGCAAACGGCGCCGTGAACACCGCGAACACGGCCCTGGCCGTCGCCAACGGTATCGCCTCGACCGCGCAGGCTGCCCTCGACGCTGCCACCTTAGCTACCAGCACGGCAAACAACGCCCTGTCGGTGGCCAACGGCATTGCCGGGACTGCACAGGCGGCTCTGGACGCGGCCAACGCGGCTAACGTCATCGCCGAGGACGCGGACGACACCGCCAACAACGCCCTGTCGGTGGCCAACGGTATCGCATCGACCGCCAACACCGCGCTGACCAACTCCAACACCGCCATCACCACCGCCAATGGCGCCGTCTCGACTGCCAACGCGGCCCAGACGACTGCCAACGCGGCGCTCGCTCGTTCGGGTGGCACCATGACCGGGCCTATCGTGCTCGCTGCCGACGCCACAGCTGCTCTGCATCCTGTGACCAAGCAGCAGTTCGAACGGTCTCCCGGCTACGCGGCTGGTTCCGGTGTGCATGGCGCCCAGCGCAACGTGATCCACAACGGCGAAATGGTCGTATGGAACCGGGGCGCCTCGCACGCGATCAACGGTACGCAGGAGAAGTTCACTGCTGACCGCTGGCGCGTGCAGGTTAACCTCGGCAGCGGCGGGGCTACTACCTCTGTGCAGTTGGCGACCGAGGGTGAGGGTCCGTTCCAAGCGAGCCGTGCCTATAACTATGCCCGTATCTCGGGCAACGTCACAGGCGCCAGCGGCTACATTCTGTTCCGTCAGCCAATCATCGACTTGCGCAAATACGCCGGCAACTACACCCTCAGCTTCTGGGCGCGGCGCAGCCACGCTGTGAAGTGCGGCGTCCGTATCTCGCAAGTGTTCGGGGATGGAGGTAGCGCCCCGGTTAGTGTGGGGAAGACCTTCACCTTCGCAGCCGCTAACACATGGCAGCTGGTGACTCTGACCTTTAACCTGCCGTCCATGTCCGGGAAGACCCACAGCGGCACGGCGCGTCTTGAGCTGTCGTTTGAGCCGGAAGTGGGCAACACGGCGTTGGGCACCAGCATCACCGGTTACACCGGGGAGTCTGTTGGCTGGGGTTCGGGTTCGTCTGCTGGCACGTTCGACATCACTTGCGTCCAGTTGGAGGCAGGCACCGTAGCCACCCCGTTCGAAATGCGTCCGTACCAAGACACCCTATTGGACTGCCTTCGGTACTTCTCGCCAACCCAGCGCAGCATCTGGGGTGGGTACGGTGCCCCCGGCGCGGGTGTGTGGAACTTCATGCCGTTCTTCACCAAGATGGTTCGGGCACCTACCCGCAACAACATCTCGGTAGTGGAGCAGGCCAACGCCGTCGATACCATTATCTCGTCGGCCAGCGAACTGGGCTTCCGCACCACCAACGCAGTACCAACCGTAGCTGGCTTCCGCGTGCAGGCCGACTACAACGCAGACGCTGACTACTACTCCCCGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c63b4f71d1c58c78b0f5833b622d04d1e6fe2e2b4e1dc162c3ea7f55067ecf59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7117
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank