Protein

View in Explore
Genbank accession
QUL77272.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MSKSIRGMAGHNNGVFYGNALYDLERKVKMDFKDIMEKGDSSQTPGPEGPQGPKGDTGPAGPVGPVGPQGPQGEIGPQGPTGPQGPVGATGPTGPEGSEGPQGPQGEQGIAGPVGPKGDTGEQGPQGEQGPAGLKGDTGDIGPAGQEGPIGPTGPTGPAGPKGDVGPQGPKGETGEQGPIGPQGPQGDVGPVGPAGLTFRGFYDPLVEYSQNDTVSYNGSTYFSLRTSIGASPDTSLEDWSLLAAEGARGPQGPTGPQGPKGDQGEIGPAGATGPEGPTGPTGPTGPAGPKGDKGDKGEVGPQGPKGDQGVMGEQGPQGIAGTTGPAGPQGPKGDKGDVGPQGPAGPQGLDGIQGPAGPQGIRGIQGPKGDTGEQGEKGDKGDKGEKGDAGISRTFLKVKTSSVGTNHAIKMPAPLDNLSIGIRLDSAVRFSIRGWIDTDTTARNVRGDIEGFNNSENYFNTTVRQLISSSTATGTTLVADISEFQRIRPYTFSFFETTTETMWRVTITLFTSGYVVTDNQWLCIEAVRLDA
Physico‐chemical
properties
protein length:532 AA
molecular weight: 53541,99760 Da
isoelectric point:4,66582
aromaticity:0,05075
hydropathy:-0,71673

Domains

Domains [InterPro]
DC_1939
ATT
3–45
DC_1939 DC_0841 IPR008160 IPR050149
IPR008160
STR
46–99
IPR008160 DC_0876 IPR008160
IPR008160
STR
247–305
IPR008160 IPR008160 DC_1535
DC_1453
STR
265–349
DC_1453
QUL77272.1
1 532
Architecture
ATT
STR
RBD
ATT 3-45 | STR 46-392 | RBD 393-532
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPEC06
[NCBI] 		2811509 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QUL77272.1 [NCBI]
Genbank nucleotide accession
MW250786.1 [NCBI]
CDS location
range 66460 -> 68058
strand +
CDS
ATGAGTAAAAGTATTAGAGGAATGGCAGGTCATAATAACGGTGTTTTTTACGGAAATGCCCTTTATGACTTAGAAAGAAAGGTTAAAATGGATTTTAAAGATATCATGGAAAAAGGTGATTCCAGCCAAACACCTGGTCCAGAAGGTCCACAAGGACCAAAAGGGGATACTGGCCCTGCCGGACCTGTAGGTCCTGTAGGTCCGCAAGGACCACAGGGTGAGATCGGGCCTCAGGGTCCTACTGGCCCTCAAGGACCTGTCGGAGCTACTGGTCCTACCGGACCTGAGGGTAGTGAAGGACCACAAGGCCCTCAAGGAGAGCAAGGTATAGCTGGTCCAGTAGGACCAAAAGGGGATACTGGTGAACAAGGTCCTCAGGGAGAGCAAGGACCCGCTGGTCTAAAAGGCGATACTGGGGATATTGGCCCTGCTGGACAAGAAGGGCCAATAGGTCCGACTGGCCCAACTGGCCCTGCCGGACCAAAGGGGGATGTTGGTCCTCAAGGACCTAAAGGCGAAACTGGTGAGCAGGGACCTATTGGACCACAAGGCCCACAAGGGGATGTTGGTCCTGTAGGTCCAGCAGGGCTTACTTTCCGAGGTTTTTATGATCCTTTAGTTGAATACTCTCAGAACGATACTGTATCTTACAACGGATCTACTTATTTTTCCTTAAGAACAAGTATAGGCGCTAGTCCAGACACATCACTTGAAGATTGGTCTTTATTGGCAGCAGAGGGAGCAAGAGGCCCACAAGGCCCAACTGGCCCTCAGGGACCTAAAGGCGACCAGGGTGAGATTGGTCCTGCCGGAGCTACCGGTCCTGAAGGTCCGACTGGCCCAACTGGCCCGACTGGACCCGCTGGACCGAAAGGGGATAAAGGAGATAAAGGAGAGGTTGGACCTCAAGGACCTAAAGGCGACCAAGGGGTTATGGGAGAACAAGGACCGCAGGGTATCGCTGGAACTACTGGACCTGCTGGTCCACAAGGACCTAAAGGCGACAAAGGAGATGTTGGCCCTCAAGGTCCCGCTGGTCCACAAGGTTTGGATGGTATCCAAGGCCCAGCGGGTCCCCAGGGGATTAGAGGAATACAAGGACCTAAAGGCGACACTGGTGAGCAGGGAGAGAAAGGGGATAAGGGTGACAAGGGTGAGAAAGGTGATGCAGGAATATCAAGAACATTCCTTAAGGTTAAAACATCATCTGTTGGCACCAATCACGCGATCAAAATGCCAGCACCTCTTGATAACCTATCTATAGGCATAAGGCTTGATTCAGCGGTACGTTTTAGTATTAGGGGTTGGATTGATACAGATACGACAGCCAGAAATGTTAGGGGGGATATTGAAGGCTTCAATAACTCTGAAAATTACTTCAATACAACGGTAAGACAATTGATATCTTCATCAACTGCAACTGGCACAACCCTTGTAGCCGATATCAGCGAATTCCAAAGAATTAGGCCATATACATTTAGCTTCTTTGAAACAACAACAGAGACAATGTGGAGAGTAACTATAACTCTCTTCACGTCAGGGTATGTAGTAACTGACAATCAATGGCTATGTATAGAAGCTGTTAGACTTGATGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd6593e76105eb47f3b57dabb34625ccfd706dbd29c0304d7a717e42bef9c274
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5468
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of avian pathogenic Escherichia coli bacteriophages UPEC01, UPEC03, UPEC06 and UPEC07 Kazibwe,G., Hinkley,T.C., Le Ny,A.-L.M. and Nakavuma,J.L. 2022-03-17 — GenBank