Protein

View in Explore
Genbank accession
QVJ07752.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MPLESANTISELDSRWPLGTDSAVFGDDHIRLIKNVLKKQFPGESGQGFDKPLTVSADYLNDIPGNLFPVGSVVLRMDDVNPATIYGGTWQLIDGDAYLTFGNGSILTGDVVGSNERSVDVPLPLHDHEATFTGDKLPDHEHSMPTEPDGSGGNGSISTGPHQPISNKFKTNATSAGTPSGTVTVQNAGVSDAKINFNVKPASIHINVWERTA
Physico‐chemical
properties
protein length:213 AA
molecular weight: 22607,70900 Da
isoelectric point:4,78086
aromaticity:0,06573
hydropathy:-0,36667

Domains

Domains [InterPro]
DC_0570
ATT
1–67
DC_0570
QVJ07752.1
1 213
Architecture
ATT
ATT 1-67 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_VA-RY-3
[NCBI] 		2831177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ07752.1 [NCBI]
Genbank nucleotide accession
MW900438.1 [NCBI]
CDS location
range 33471 -> 34112
strand -
CDS
ATGCCTTTAGAATCCGCTAATACGATATCAGAGCTCGATAGCCGCTGGCCTCTTGGGACGGACTCAGCAGTATTCGGCGATGACCACATTCGCCTTATCAAGAACGTCCTCAAGAAACAATTCCCCGGCGAGAGCGGACAGGGTTTTGATAAGCCGTTAACTGTTAGTGCCGACTATCTCAATGATATACCAGGCAATCTGTTTCCAGTTGGCTCAGTAGTTCTGCGAATGGATGATGTCAACCCCGCCACCATTTATGGCGGCACTTGGCAACTCATCGACGGTGATGCCTATCTAACATTCGGCAATGGCTCAATTCTTACCGGTGATGTAGTAGGCAGCAATGAAAGAAGCGTCGACGTTCCGCTTCCGCTTCACGATCACGAAGCAACATTCACGGGTGACAAGCTACCTGATCACGAACACTCTATGCCTACTGAGCCGGACGGAAGTGGCGGCAATGGCTCCATCTCCACTGGTCCACACCAGCCAATCAGCAATAAGTTCAAGACCAATGCAACCTCAGCGGGAACTCCGTCTGGCACAGTCACTGTTCAAAACGCTGGCGTATCCGACGCTAAGATCAACTTCAATGTTAAGCCTGCGTCTATTCACATTAACGTTTGGGAGCGGACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2055ded05d45321f4108f236dea2e8ccb372f5bc168cb7a454b359c0536c9913
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence analysis of Vibrio alginolyticus lytic phage vB_ValP_VA-RY-3 Ren,Y., Xu,Y. and Wang,L. 2021-04-02 — GenBank