Protein

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Genbank accession
ADA79900.1 [GenBank]
Protein name
putative protein
RBP type
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MQTNFKGDMQMANLVGDPATPQGKYVVLDTTVGSTRSVIVPQLSGHQGDAGWIVYLAVKDGDTPHNMDGQKLVLKAKDASGTPKVSDTMTAVDSSAGGLVQFTVPAQFYQADGPYSTAYFELRSISSDTVISTINVSFEVLESATIMTTGQSEIYNNLMSNTMESVNASISSQLQALQTQVSNAAPLANEAQASLDAITAAAKANSFPTLSGANTFTGNNTFNGTTTINSLVSPTLDSLKSTLTNNINAVSTSVSSQMAGKLSVEESWTRNYTLGGAFTAPSAGTNQFALSRYKIMDGLVIIVGRGDLVVNSTDEYYEGSITLPWVVDNADTAFAQVYWNDANGASSYALPHLGTKSNQIGLSMKGARTNWTIRLSLIILTQDY
Physico‐chemical
properties
protein length:384 AA
molecular weight: 40694,87980 Da
isoelectric point:4,65144
aromaticity:0,07552
hydropathy:-0,09505

Domains

Domains [InterPro]
IPR018913
ATT
57–149
IPR018913
IPR018913
ATT
57–145
IPR018913 DC_1243
ADA79900.1
1 384
Architecture
ATT
STR
ATT 57-149 | STR 150-384
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiPYB5
[NCBI] 		438780 No lineage information
Host Lactobacillus fermentum
[NCBI] 		1613 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADA79900.1 [NCBI]
Genbank nucleotide accession
GU323708 [NCBI]
CDS location
range 17187 -> 18341
strand +
CDS
ATGCAAACGAATTTTAAAGGAGATATGCAAATGGCAAATTTAGTAGGTGACCCCGCCACCCCACAAGGCAAGTATGTTGTGCTAGACACCACGGTTGGCTCAACCCGCTCGGTGATCGTCCCACAGCTTTCTGGACACCAGGGTGACGCTGGGTGGATTGTCTATTTAGCCGTTAAAGATGGGGATACACCTCACAACATGGATGGCCAAAAGCTAGTCCTTAAGGCCAAAGACGCAAGCGGGACGCCAAAGGTATCTGACACCATGACCGCTGTCGATTCATCAGCGGGTGGGTTAGTACAATTTACGGTTCCGGCTCAGTTTTACCAGGCTGATGGGCCGTATAGCACGGCTTACTTCGAACTTAGGTCAATTTCGAGTGACACAGTTATCAGTACGATTAACGTTAGTTTTGAAGTACTTGAATCAGCCACCATCATGACGACCGGGCAAAGCGAGATCTATAACAATCTGATGAGCAACACAATGGAATCGGTAAATGCTTCCATTAGTAGCCAACTCCAGGCATTGCAAACGCAAGTTAGCAACGCGGCCCCACTAGCTAATGAAGCTCAAGCAAGCTTAGACGCTATCACGGCCGCCGCTAAGGCTAATTCTTTCCCAACTCTTTCTGGGGCGAACACCTTTACTGGCAACAACACTTTTAACGGCACGACAACGATCAATAGTTTAGTTAGCCCTACGTTAGACAGCCTTAAGTCTACGTTGACTAACAACATCAACGCTGTGTCGACATCCGTTAGCTCTCAGATGGCTGGCAAGCTATCCGTGGAAGAATCATGGACGCGAAACTACACGCTGGGCGGAGCTTTTACGGCACCAAGCGCTGGGACTAACCAATTCGCATTAAGCCGTTACAAGATTATGGATGGTTTGGTCATCATCGTTGGGCGGGGCGACTTAGTGGTCAACTCAACAGATGAGTATTACGAAGGAAGTATTACTCTCCCATGGGTAGTTGATAACGCGGACACGGCCTTCGCACAAGTCTACTGGAATGATGCCAATGGGGCAAGTTCATACGCGCTCCCTCACTTAGGAACGAAGAGTAATCAAATTGGGCTTTCTATGAAGGGGGCACGGACCAACTGGACGATTCGGTTGTCGCTGATCATTCTCACGCAAGACTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8fd5241aa56bdcfbac013d498e4d34fc23aa22d3ca35218fbc432ab12f3fcaf3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of the two-component cell lysis cassette encoded by temperate bacteriophage phiPYB5 of Lactobacillus fermentum Wang,S., Kong,J. and Zhang,X. 2008 19120640 GenBank
Genome analysis of Lactobacillus fermentum temperate bacteriophage phiPYB5 Zhang,X., Wang,S., Guo,T. and Kong,J. 2011 21111501 GenBank