Protein

View in Explore
Genbank accession
AXY85482.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYRTGTAAMDAQGVITGTGTKWREPLSLIRTGATIVFLTSPLKLAVISDIVSDTEMKAIQTDGDPVENGNYVILLNDSLTVDGMAQDVAETLRYYQSKETVIEEVIEFFKNFDLKTLQDLVNKVNADAQQVANDKAETEQLKNETQQIKDSAVSETQQIKDAAVNETNQIKADTDAIKTQTQQIKDSAVAEIGSIKNEAVNARDAAKESQLAAEQSNVAAGNAKQGAETARDEARQWAQQVNPENLLHKDQNLNDLANKDLAREALKVEAVNSVKGQNPGDYNSFRNPAWTYELRIANNGEWRVARNSDNSTSALSVGAGGTGAQSIGQARSNFGIGETDIPVFRGISLTEKNSVNSGILYLINKSPEDVQLSYSRIYNEIQGGLAKTTIQVTREGGDTNYYQFDESGNAINYNSIVIGRGIGNALGSNALVIGDTDTGFRQNGDGILQAIADGQVMFAFTKSVNIAYRTIQSLAPEDARFAYVEGVRRGGANCFIGGHVEGGAFTAWRDRAAGMLVELPSDDVAVNVVKVVRWGGDWAFGIDVARYGAGGCETHFNVRGAVYGFNDAGYASAVQWVNTSDIRLKANLKEIESAKEKVKSIKGYTYFKRNNLDEDEYSFYSEEAGVIAQDVQTVLPEAVYKISDSEYLGVSYGGVTALLVNAINEMIDDSDKQNETIQKQQDEINELKNEVAEMKKMIEEMQSMFIQIAK
Physico‐chemical
properties
protein length:712 AA
molecular weight: 77626,23840 Da
isoelectric point:4,68680
aromaticity:0,07303
hydropathy:-0,40688

Domains

Domains [InterPro]
DC_0313
STR
1–712
DC_0313
Coil
Unmapped
116–136
Coil IPR036388
IPR030392
CHP
582–642
IPR030392 Coil
IPR030392
CHP
582–679
IPR030392
AXY85482.1
1 712
Architecture
STR
STR 1-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Sazh
[NCBI] 		2315629 Uroviricota > Caudoviricetes > Drexlerviridae > Tlsvirus > Tlsvirus blueshaddow
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY85482.1 [NCBI]
Genbank nucleotide accession
MH729819 [NCBI]
CDS location
range 32300 -> 34438
strand -
CDS
ATGGCTTTATATCGCACTGGTACTGCTGCAATGGACGCACAAGGCGTTATTACTGGCACTGGCACAAAATGGCGTGAGCCTCTTTCTCTTATCCGTACTGGCGCAACAATCGTATTTCTCACATCGCCTCTTAAATTGGCTGTGATTAGCGATATTGTAAGCGACACGGAAATGAAAGCGATCCAGACTGACGGCGATCCAGTAGAAAACGGAAATTATGTGATCCTGTTGAATGACTCTTTAACGGTGGATGGAATGGCGCAAGATGTTGCGGAAACTCTGCGCTATTACCAAAGTAAAGAAACTGTTATTGAGGAAGTGATTGAATTCTTTAAAAACTTCGATCTGAAAACATTGCAAGATTTAGTTAACAAGGTTAATGCTGATGCTCAACAGGTAGCAAACGACAAAGCAGAAACTGAGCAACTAAAAAATGAAACGCAACAGATTAAGGATTCTGCTGTATCTGAGACTCAACAGATTAAGGATGCTGCCGTCAATGAAACCAATCAGATTAAGGCAGACACTGACGCAATAAAAACGCAGACGCAACAAATAAAAGATAGCGCCGTTGCTGAAATTGGATCAATTAAAAACGAGGCTGTTAATGCTCGCGATGCAGCAAAGGAATCACAACTTGCCGCTGAACAATCAAACGTTGCAGCCGGAAACGCTAAACAAGGCGCTGAAACTGCGCGTGATGAAGCTCGCCAATGGGCACAACAAGTTAACCCTGAAAACCTTCTGCATAAGGATCAGAATCTTAATGATCTTGCTAATAAAGATTTAGCAAGGGAGGCGCTGAAAGTTGAGGCTGTTAATTCAGTTAAGGGGCAAAATCCAGGTGATTATAACTCATTTCGTAACCCTGCATGGACTTATGAATTACGGATCGCAAACAACGGCGAGTGGCGAGTTGCAAGAAATAGCGATAACAGCACATCCGCTCTTTCTGTTGGTGCTGGCGGCACTGGCGCTCAAAGCATAGGGCAAGCAAGGAGTAATTTTGGCATTGGTGAAACTGACATTCCTGTTTTTAGAGGAATAAGCCTAACAGAAAAAAACTCTGTAAACTCTGGAATTCTTTATTTAATAAACAAAAGTCCAGAAGATGTACAGCTTTCATACTCAAGAATTTACAACGAAATTCAAGGTGGATTAGCAAAAACAACAATACAAGTCACTAGGGAAGGAGGTGATACAAACTATTATCAATTTGATGAAAGCGGTAACGCGATAAATTACAATTCAATAGTTATCGGTAGGGGTATTGGTAATGCGCTTGGAAGTAATGCGTTAGTAATTGGTGATACAGACACTGGATTTAGGCAAAATGGAGATGGGATTCTTCAAGCAATTGCTGATGGTCAAGTGATGTTTGCATTTACAAAAAGTGTCAATATTGCATACAGAACTATTCAATCACTTGCTCCAGAAGATGCTAGATTCGCTTATGTTGAAGGAGTTAGACGCGGTGGCGCTAATTGCTTTATAGGTGGGCATGTTGAGGGTGGTGCTTTTACTGCATGGCGTGATCGCGCCGCTGGTATGCTTGTTGAACTTCCAAGCGATGATGTAGCCGTTAACGTTGTTAAGGTTGTAAGGTGGGGTGGTGATTGGGCTTTTGGTATAGATGTTGCCAGATATGGAGCTGGAGGTTGCGAAACTCATTTTAATGTAAGGGGCGCTGTTTATGGGTTTAACGATGCTGGTTATGCGTCTGCTGTGCAATGGGTTAACACTTCCGATATTCGCCTGAAAGCAAACCTAAAAGAGATTGAAAGCGCTAAAGAAAAAGTGAAATCAATAAAAGGTTACACTTATTTTAAGCGCAACAATCTTGATGAAGATGAATATTCTTTCTATTCGGAGGAGGCTGGTGTAATAGCTCAAGACGTGCAAACTGTTTTACCGGAAGCGGTTTACAAGATTTCAGATTCAGAATATTTAGGTGTTAGCTATGGCGGTGTAACTGCTCTTTTGGTTAACGCAATTAATGAAATGATTGATGATTCAGATAAGCAGAATGAAACCATTCAGAAGCAACAAGATGAAATCAATGAGCTAAAAAATGAAGTAGCAGAAATGAAAAAGATGATCGAGGAAATGCAATCAATGTTTATTCAGATTGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d68cb863ee0f4c3c53c83727e8c03bfeb8f2d5595ea9d94c9c84859ceaf0ba6b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Citrobacter freundii Siphophage Sazh Crossland,W.L., Shaw,J.P., O'Leary,C., Gill,J. and Liu,M. 2019 31831614 GenBank