Protein

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Genbank accession
ALN97132.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MCKQQNCGCNDPCKPVICVSYVEDSCADRKLATSNTTHPTGYDNVTLITPEVNQISAYKEHLEFVNSPELLSNIPKHSVLRFSQKFLDIISNLFKGRNVGTGAKVYKGSTVLGLDTFQDFKTLKNSSSVDVNNDTNEIIFSVNENWLEAQMPIIPPPIVPDYPVIDGISVGTGVPIYDGITNKKIKISSLKSNTLNISKLLDGTVKIDSINTEFDYLKAYYINSNYVSTLLSPADGSVSRPFPTWDEARTKMIGTGTILNPENQNVTFILQTNASTALNPTINTLSIKFMNTSLTYTGNDVYMIDSEVLYPLIPKDTNNEITESITLNIFGVGSLHRTTVGGYIRSVGAKRGSSITTNNPNNIIFRIGENENDTLYLEEFVNYPNSIWEGDVLKRDGVTLLGNDYNPPIVLKWTTQVNPTNPLVYVKNNSFGSFTYPVLGKGSLYIQTFVNTGLHVENTNINFNKLTILPYSYRISVVQGNTFVPSFPGVYEPKNAPAIYSKDVQWFLNSLYNINIGTFTFNGFDKFFKIEGFFTFHGSTNYDTSHYIKTFADLSTTTQNSFQINGLDKNSNLNSNINYLINSNIVGDFNLFIPNSSIRTIRNISQNPTTNIIPITKGTLSSINDKPYLSGINDYADDAAAMSTGLLQNALYFNTTNNVLDKV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 73608,96470 Da
isoelectric point:5,52477
aromaticity:0,10558
hydropathy:-0,22172

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALN97132.1
1 663
Domain Start End Length (AA) Confidence
N-terminal 1 260 260 0,8741
Central domain 261 613 354 0,9309
C-terminal 614 663 49 0,8947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-260
Central
261-613
C-terminal
614-663

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FpV4
[NCBI] 		1740108 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALN97132.1 [NCBI]
Genbank nucleotide accession
KT876724 [NCBI]
CDS location
range 16096 -> 18087
strand +
CDS
ATGTGTAAACAACAAAATTGTGGGTGTAATGACCCATGTAAACCTGTAATATGTGTTTCTTATGTAGAAGATTCTTGTGCTGATAGAAAATTAGCTACAAGTAATACTACACATCCCACAGGTTATGATAATGTAACTTTAATAACACCAGAGGTAAATCAAATATCTGCATACAAAGAACATTTAGAATTTGTAAATTCACCTGAACTTTTAAGTAATATTCCTAAACATTCTGTATTAAGATTTTCACAAAAATTTCTTGATATTATTTCTAATTTATTTAAAGGTAGAAATGTAGGTACTGGTGCTAAGGTATATAAAGGAAGTACAGTATTAGGACTAGATACATTTCAAGATTTTAAAACTCTTAAAAATTCTAGTTCAGTAGATGTAAATAATGATACTAATGAAATAATTTTTTCTGTAAATGAGAATTGGTTAGAAGCGCAAATGCCTATTATACCACCACCTATTGTACCAGATTATCCAGTTATAGATGGTATATCTGTTGGTACAGGTGTACCAATATATGATGGAATAACTAATAAAAAAATTAAAATATCATCATTAAAATCAAATACTTTAAACATTTCTAAACTCCTTGATGGTACAGTAAAAATAGATAGTATAAATACAGAGTTTGATTATCTTAAAGCATATTACATAAATAGTAATTATGTTTCAACTTTATTATCACCTGCTGATGGTTCTGTTAGTAGACCTTTTCCAACATGGGATGAAGCTAGAACAAAAATGATTGGTACAGGTACTATTTTAAATCCTGAAAATCAAAATGTAACATTTATATTACAAACTAATGCTTCAACAGCTTTAAATCCTACTATAAATACATTAAGTATTAAGTTTATGAATACCTCATTAACTTATACAGGAAATGATGTCTATATGATAGATTCAGAAGTATTATATCCATTAATACCTAAAGATACTAACAATGAAATTACTGAATCAATTACACTCAATATTTTTGGAGTTGGTTCTTTACATAGAACTACAGTTGGTGGTTATATAAGAAGTGTTGGAGCTAAAAGAGGTTCAAGTATAACAACAAATAACCCTAATAATATTATCTTTAGAATAGGTGAAAATGAAAATGATACTTTATATTTAGAAGAGTTTGTGAATTATCCAAACTCAATATGGGAAGGAGATGTTTTAAAACGAGATGGAGTAACTTTACTTGGTAATGATTATAATCCACCAATAGTTTTAAAATGGACAACTCAAGTAAATCCTACAAACCCATTAGTATATGTTAAAAACAATAGTTTTGGTAGTTTTACTTATCCTGTGCTAGGGAAAGGTAGTTTATATATACAAACTTTTGTAAACACTGGATTACATGTTGAAAATACAAATATAAATTTCAATAAACTGACTATACTTCCTTATTCTTATAGGATTTCTGTTGTGCAAGGTAACACTTTTGTACCTAGTTTTCCTGGAGTATATGAACCAAAAAATGCTCCAGCTATCTATTCAAAAGATGTTCAATGGTTTTTAAACTCTTTATATAATATAAATATTGGTACTTTTACATTTAATGGTTTTGATAAATTTTTTAAAATAGAAGGTTTTTTCACTTTTCATGGTTCAACTAATTATGATACAAGTCATTATATAAAAACATTTGCTGATTTAAGTACAACCACACAAAATAGTTTTCAAATAAATGGTTTAGATAAAAATTCAAATCTTAATTCAAATATTAATTATTTAATAAATAGTAATATAGTTGGAGATTTTAACCTATTTATACCTAATTCTAGTATAAGAACTATAAGAAACATTAGTCAAAATCCAACTACTAATATTATTCCAATTACAAAAGGTACTTTATCCTCTATAAATGATAAACCCTATTTGTCAGGAATAAATGATTATGCAGATGATGCAGCAGCAATGTCAACAGGACTACTACAAAATGCATTATACTTTAATACAACAAACAATGTTTTAGATAAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
647b350e0943548903de330aa601f7bd24fe6f9a5a5439281a6a3a32e713d3af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative Genome Analysis Provides Insights into the Pathogenicity of Flavobacterium psychrophilum Castillo,D., Christiansen,R.H., Dalsgaard,I., Madsen,L., Espejo,R. and Middelboe,M. 2016 27071075 GenBank
Molecular aspects and genomic diversity of bacteriophages-specific to fish pathogen Flavobacterium psychrophilum Castillo,D. Sr., Christiansen,R. and Middelboe,M. 2016-12 — GenBank