Protein

View in Explore

UniProt accession

A0A088FVV6 [UniProt]

Protein name

Short tail fibers protein

RBP type

Evidence RBPdetect

Probability 0,90

Protein sequence

MSNNTYQHVSNESVYVEFDPTGSNFDSSITNVQAALASISAYGVKGVPDASEAEKGVIQLATEQEVLDGFNSTKAVTPATLNARLQYPNASETQYGVTKYATQEEAIAGTLDTVSITPLKLNQTIDNTFSTRYSTETTNGVIKIATQTAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNDPASESITGVVRLATVAQTRQGTLREGYAISPYTFMNSVASQEYKGVIRLGTQAEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGVAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIQMFAGDSAPPGWVLCHGGTISGDQFPDYRNVVGTRFGGDWNNPGIPDMRGLFVRGAGTGSHILNNRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGGWGEYNRHEAPFGASVYQGYLGTRKYSDWDNASYFTNDGFELGGHRDATGTLNREGLIGYETRPWNISLNYIIKVHY

Physico‐chemical properties

protein length:	516 AA
molecular weight:	55084,12840 Da
isoelectric point:	5,43065
aromaticity:	0,08140
hydropathy:	-0,40717

Domains

Domains [InterPro]

DC_0176
STR
1–437

DC_0176

G3DSA:2.10.280.10
Unmapped
246–286

G3DSA:2.10.280.10 IPR037053 IPR044916

IPR015173
STR
246–324

IPR015173 SSF88874

SSF69349
STR
246–346

SSF69349 IPR027448

IPR011083
ATT
337–392

IPR011083

A0A088FVV6

1 516

Architecture

STR

ATT

STR

STR 1-323 | ATT 324-392 | STR 393-514 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0176	STR	DC_0176	1	437	Novel HMM	DC_0176	Central	Low	Positional only	613 proteins / 613 hits
G3DSA:2.10.280.10	Unmapped	-	246	286	Gene3D	None	-	-	-	-
IPR015173	STR	DC_0719	246	324	InterPro cluster	Bacteriophage T4, Gp12	Central	Low	Positional only	349 proteins / 349 hits
SSF69349	STR	SSF69349	246	346	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR037053	ATT	IPR037053	324	388	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	330	514	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	337	392	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	389	507	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	424	514	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Shigella phage Shf125875 [NCBI]	1541825	Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host	Shigella flexneri [NCBI]	623	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

No CDS data available.

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0098024	virus tail, fiber	Cellular Component	IEA:InterPro (UniProt)
GO:0046872	metal ion binding	Molecular Function	IEA:InterPro (UniProt)

Tertiary structure

PDB ID

db69a9624bbb6825b46638ba56a487c1f02d83beea69e769dc9718c015a7fca9

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6727

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence