Protein

View in Explore
Genbank accession
WCD43333.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MAKPIYYPDWATQTVTLPGTLNTNKIRPKETIRTVGMDYGQIMTCEEMNWILNNIGLWIRYLVDDFLPTLPNTYLPLVGTKITMAGDATGEATWNGNKEVTLSIQVQDNSHNHLSANITDATSSTVTPNVLVKRDAGGAIYGGDVYVNGTSTTDPATLFFKNFAGQTNGEISAEYQTGGQLYIYRRNPSTGGVAAGVRLYDAGYVLIDNPRSNSGQDTSNGNALVRLDYLNSRLSSLQNTLQTNINSVQNNLNNVNSNLNSRIDNLQNSLQSQINSLQSQVNARVTAVRINGRIQLGVSESPYYAGHVMTGWAFGDKKELRGASYWSGPLQYYVNGRWVTVSY
Physico‐chemical
properties
protein length:343 AA
molecular weight: 37689,50510 Da
isoelectric point:6,83440
aromaticity:0,09038
hydropathy:-0,39038

Domains

Domains [InterPro]
DC_0413
STR
1–332
DC_0413
SSF64518
STR
78–280
SSF64518
G3DSA:1.20.5.340
STR
175–294
G3DSA:1.20.5.340
Coil
Unmapped
238–276
Coil
WCD43333.1
1 343
Architecture
STR
STR 1-332 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECML-183-2
[NCBI] 		2910937 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD43333.1 [NCBI]
Genbank nucleotide accession
OL631481 [NCBI]
CDS location
range 11703 -> 12734
strand -
CDS
ATGGCGAAGCCAATATATTATCCTGACTGGGCTACACAAACTGTAACGCTCCCAGGAACTTTAAACACAAACAAAATTAGACCTAAAGAAACCATCCGCACAGTTGGTATGGATTATGGTCAAATCATGACTTGCGAAGAAATGAACTGGATTCTTAATAATATCGGTTTATGGATTCGCTATTTGGTGGATGACTTTCTTCCAACTTTACCTAATACCTACTTGCCTTTAGTTGGAACTAAGATTACAATGGCAGGTGATGCTACTGGTGAGGCTACTTGGAACGGTAATAAAGAAGTTACTTTATCTATCCAAGTTCAAGATAACAGTCATAATCACTTGTCAGCAAACATTACAGATGCTACTAGTTCAACAGTAACACCAAATGTGTTGGTAAAACGTGATGCGGGTGGTGCTATTTATGGTGGCGATGTTTATGTTAATGGCACTTCCACAACAGATCCTGCAACCCTGTTCTTCAAAAACTTTGCAGGACAAACAAATGGTGAGATTTCTGCTGAGTATCAAACCGGAGGCCAGCTTTACATCTATCGTAGAAATCCTAGCACAGGTGGCGTTGCGGCTGGCGTTCGTTTATATGATGCTGGTTATGTTCTAATTGACAATCCAAGATCGAATAGTGGACAAGATACTTCAAACGGAAATGCTTTGGTCCGCTTAGATTATTTGAACTCTCGTTTAAGCTCTCTTCAAAATACATTACAAACAAACATTAACAGCGTTCAAAATAATTTGAATAATGTTAATAGCAATTTAAATTCTCGTATTGATAATTTGCAAAACAGCTTACAAAGTCAAATAAACTCGCTTCAAAGTCAAGTGAATGCACGTGTAACGGCAGTTCGTATTAATGGACGTATTCAGTTAGGTGTATCAGAATCCCCTTACTATGCTGGTCACGTTATGACTGGTTGGGCTTTCGGTGATAAGAAAGAACTTCGTGGTGCTTCTTATTGGTCTGGTCCATTGCAGTACTATGTAAATGGTAGATGGGTAACAGTAAGCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb39f19639b616e513f17735e4838ccaa713fe2fe13dbe439a3200ec833ad785
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7267
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virulent bacteriophages provide an effective reduction of big-seven Shiga-toxin producing Escherichia coli on various foods Vikram,A., Woolston,J., Hickey,S. and Sulakvelidze,A. 2023-09 — GenBank