Protein

View in Explore
Genbank accession
YP_010645959.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MQIWIHDKSMRKVCALNNEIPGMLPYTNSQWHSYLEYSTSTFDFTIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELAMEIARPLPSSNGPQKLEWYLQNLDLLGFAGLEVGFNEISDRTRTITFESQSGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYQRPDENHHGIGKVRGDVTLYYQTGLKDVQVSSDKTQLFNAGVFTGANGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPLSRERYPSTMNPDSADNWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSIELQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPILKQGDKIVNATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGDRGNDGLPGKDGVGLKSTTITYGMSDSDTIMPTSWTANPPTLIKGKYLWTKTQWTYTDSTSETGYQKTYIAKDGNNGNDGLPGKDGVGIRNTTITYAQGTSGTVAPTNGWSTQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGEQGPKGDRGNDGKTTYFHTAWSYSADGTDRFSTVYPNLNLLVNSSAKTKDGFFKDFDKVENGYGEVTMTGTNTWVARNMWDGFSIKPRDYKPGDKYTMSMDVMITSWNLPAGTHLDEFWIGQRYSHGGGLYSWKRICFIELPKDPSKMLNQWIKITQTSTIPPYEDPAINTEAIFITKFTGPSEGSFTIRIRNPKQELGETATPYMPSASEVTTADYPSFIGHYTNYTQVDSPNPRDYTWVLIRGSDGKDGIPGKAGADGRTPYVHFAYADSADGKTGFSLTQTGNKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGENLIINSAFPKNLDGWGFWDASTPNNNLHIATHGFYYNGTKPLFRLDNNTNGVVPASTKRFPVKRNTDYSLNIQIFATGNLKSVDIYFLGRKANETDKELTKVIHLKTHTGSPSTTQTVKWHLTFNSGDCDEGFIRIINNGTTDGNTSMLFFAELDCYEETTDRAWQASSKDLEEEIDTKADDVLTQAQLNRLNETNSIIKAELNAKASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMTASNEGLVVGKTDNSSSMLFSPNGRISMFSAGNEVMYISQGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1309 AA
molecular weight: 146806,35720 Da
isoelectric point:5,23182
aromaticity:0,11230
hydropathy:-0,56692

Domains

Domains [InterPro]
DC_0002
STR
1–606
DC_0002 IPR054563 DC_0002
IPR010572
ENZ
142–381
IPR010572 DC_1328 Coil
YP_010645959.1
1 1309
Architecture
STR
STR
STR 1-862 | STR 885-1309
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC877
[NCBI] 		2365044 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010645959.1 [NCBI]
Genbank nucleotide accession
NC_070675.1 [NCBI]
CDS location
range 14869 -> 18798
strand +
CDS
ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAAGTGTGCGCATTGAATAATGAAATTCCCGGAATGTTGCCATATACGAACAGTCAATGGCATTCATATCTTGAATACTCAACAAGTACGTTTGACTTCACAATTCCTAAAATTGTAAATGGCAAGCTACACGATGATTTAAAATACATCAATGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAACAATACCAATCTTGAATTAGCAATGGAAATTGCACGTCCTCTTCCTAGCAGTAATGGACCTCAGAAATTAGAGTGGTATCTTCAAAATCTTGATTTACTTGGTTTTGCTGGTCTTGAAGTTGGTTTTAATGAGATTTCTGATAGAACAAGAACTATCACGTTCGAGTCTCAAAGTGGTACAAAACTAGAACAGCTTCATAGCTTGATGAATCAATTCGATGCAGAGTTTGTTTTCCGTACAGATTTAAACCGAGATGGTACTTTGAAAAAATTTGTCATTGACATTTACCAACGACCAGATGAAAACCATCACGGAATTGGAAAGGTTCGAGGGGATGTAACTCTTTACTATCAAACAGGATTGAAGGATGTTCAAGTATCCAGCGATAAGACTCAACTATTTAATGCTGGTGTTTTCACTGGTGCAAACGGGGTTAATCTTGATAGCGTTGAGTTTGAAGAGAAAAATGAGTTAGGACAAGTTGAGTTCTACTCTCGAAAGGGCACTAGCTTCGTTTTCGCCCCACTATCAAGGGAACGCTACCCATCTACCATGAATCCAGACAGCGCTGATAACTGGACACGTAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTGCGTACTATCAAACAGTATGCTTATCCTCTAATGACATATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGACATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTACAAACAATTCGGTCGTTTTTACTAATTTCAGAAAGTTAGATAATAAACCGTCTATCGAATTGCAACAACGTATCGACGAGATTGTTTCTAAATCATTGCCATATCATGTTGAGATAAGGACCACAAACGGTACAGTATTTAAGAATGGTATTGGTCGCTCTACTGTTAAACCAATTTTAAAGCAAGGCGATAAAATTGTTAATGCAACATATCGCTTTGTGATTGACGGTACTATTAAATACTCAGGTATGACCTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATAGAGGTAATGACGGCTTACCTGGTAAAGACGGGGTAGGCTTGAAATCTACCACAATCACTTACGGCATGTCTGACAGTGATACTATCATGCCTACGAGTTGGACTGCAAACCCACCAACTTTGATTAAAGGGAAATACCTATGGACTAAAACTCAGTGGACGTATACTGATAGTACAAGTGAGACTGGTTATCAAAAGACTTATATTGCTAAAGATGGTAATAACGGTAATGATGGCCTTCCGGGTAAAGATGGCGTTGGTATACGTAATACCACAATCACTTACGCACAAGGAACATCTGGAACAGTAGCACCAACGAATGGTTGGAGTACTCAAGTGCCGAATGTACCTGCTGGACAATACCTATGGACTAAAACAGTCTGGGATTATACTGACAACACTAGTGAAACTGGATATTCAGTCGCTAAAATGGGCGAGCAAGGTCCAAAAGGCGACCGTGGTAATGATGGGAAGACTACATATTTTCACACAGCATGGTCTTACAGCGCAGACGGCACTGATAGGTTTAGTACTGTTTATCCAAATTTGAATCTGTTAGTTAATAGTTCAGCTAAAACCAAAGATGGGTTCTTTAAAGACTTCGACAAAGTAGAAAATGGCTACGGAGAAGTTACAATGACGGGAACTAATACATGGGTTGCTAGAAACATGTGGGATGGTTTCTCTATTAAACCTAGAGATTATAAACCCGGCGATAAGTACACAATGAGTATGGACGTTATGATCACAAGTTGGAATCTCCCTGCTGGAACACATCTTGACGAGTTTTGGATTGGTCAGCGATACTCTCATGGCGGAGGATTATACTCATGGAAGCGTATTTGTTTTATTGAATTACCTAAAGACCCTAGTAAAATGCTGAACCAATGGATAAAAATAACACAAACGTCAACGATACCTCCGTATGAAGACCCCGCTATCAACACAGAAGCAATCTTTATTACTAAATTTACTGGTCCGAGTGAAGGTAGTTTCACGATAAGGATTAGAAATCCAAAACAAGAACTAGGCGAAACCGCCACTCCATACATGCCATCAGCTAGCGAAGTCACAACTGCTGACTATCCAAGTTTCATCGGACACTACACAAACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGGGTTCTCATTCGAGGTAGCGATGGTAAAGATGGTATTCCAGGTAAAGCTGGAGCAGATGGTAGAACACCTTACGTTCACTTTGCTTATGCAGACAGTGCCGATGGTAAAACTGGGTTCAGTTTGACCCAAACTGGTAATAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACTAATCCATCGGACTATACGTGGAATGACACTGCTGGAAGTGTTTCAGTTGGTGGAGAGAATCTAATCATTAACTCGGCTTTCCCAAAGAATCTTGATGGATGGGGTTTTTGGGACGCAAGTACACCTAATAACAATCTTCATATAGCTACACATGGATTTTACTATAACGGAACAAAACCCCTTTTTAGATTAGACAATAACACCAATGGTGTGGTTCCTGCATCAACAAAACGTTTTCCAGTCAAACGCAACACTGATTATTCTCTAAATATTCAGATATTTGCAACCGGAAACCTCAAGAGCGTTGATATCTATTTTCTTGGCAGGAAGGCGAATGAAACTGACAAGGAATTGACTAAAGTGATCCATTTAAAAACACATACAGGTTCACCATCAACCACACAGACGGTTAAATGGCATCTAACATTTAACTCTGGAGATTGCGACGAAGGGTTCATTCGTATTATTAACAATGGCACTACTGACGGTAACACTTCTATGCTATTTTTTGCAGAACTAGACTGCTATGAGGAAACCACTGACCGAGCGTGGCAAGCGTCGTCGAAAGATTTGGAAGAGGAAATAGACACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAAACGCTAAAGCATCACTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTCATCGATAGCTACATGACTGCATCAAACGAGGGTCTTGTTGTTGGTAAAACTGATAATTCTAGTTCTATGTTGTTTAGTCCAAACGGGCGCATCTCAATGTTTTCTGCGGGTAATGAGGTAATGTATATCTCGCAAGGTGTCATCCATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01965e143644c14464912232faa1855f5a841783ec622c216f2ea381dc0c444a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7213
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank