Protein

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Genbank accession
QQO92133.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATWKKLVVSGSDISQLNNDAGYLTSVTAQTAFVTASFNGVHLIANNSEGQLNFASSSGQGLTISANAGTDTLTFGLAAIPNTSLANSTFNVGAGNGLTGGGSANLGGTSTVNVGAGTHITVNTDDIAVNESTLITAISGSIFSQVSGDVTIASNGVATIAANSVALGTDTTGDYVANLGTGTGVTIASNTGEGSAPTIAVNYGSTVNTAVQGNTTISLTGTANEVQITGTTAQALGGAPSYTIGLPDNVTITTDLTVGGNLYVNGTTTQVNTAELFVEDKFIILASGSASAGDGGIIIDRGSDAAGNIAFGYDSATDRWGYQNGLTDTTNAITIGTDGDSAFAGYVFTEAAHTSAPTSGEFVAAGAIYTATSGDIFIYS
Physico‐chemical
properties
protein length:380 AA
molecular weight: 37539,29670 Da
isoelectric point:4,05003
aromaticity:0,06579
hydropathy:0,17842

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO92133.1
1 380
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,1602
Central domain 103 301 200 0,1966
C-terminal 302 380 78 0,9430
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-301
C-terminal
302-380

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage vB_FspM_immuto_3-5A
[NCBI] 		2801478 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium sp. LMO8
[NCBI] 		2654244 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Flavobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO92133.1 [NCBI]
Genbank nucleotide accession
MW353176 [NCBI]
CDS location
range 136185 -> 137327
strand +
CDS
ATGGCAACTTGGAAAAAACTCGTCGTATCAGGGAGCGACATATCACAATTAAACAACGATGCAGGATACTTAACCTCAGTTACAGCTCAAACTGCTTTTGTAACAGCATCTTTTAACGGCGTACACCTTATAGCAAATAATTCAGAAGGGCAATTAAATTTTGCTTCTTCATCAGGACAAGGTTTAACTATTTCTGCAAACGCTGGAACAGATACATTAACATTCGGTTTAGCAGCTATTCCAAATACAAGTTTAGCAAATTCAACCTTTAACGTAGGGGCAGGAAACGGTCTTACGGGAGGAGGTTCTGCAAACTTAGGTGGAACTTCAACAGTTAATGTAGGAGCAGGTACTCACATTACTGTTAATACAGATGACATAGCTGTTAACGAATCAACATTAATAACAGCAATTTCTGGATCAATTTTCTCACAAGTAAGTGGAGATGTTACCATAGCATCAAACGGTGTTGCGACCATAGCAGCAAATTCAGTAGCATTAGGAACTGACACAACAGGCGATTATGTAGCTAACTTAGGAACAGGTACAGGTGTTACAATTGCATCAAACACAGGAGAAGGTTCAGCACCAACAATTGCAGTTAATTACGGTTCAACAGTAAATACAGCAGTACAAGGTAACACTACAATTTCGTTAACAGGAACAGCAAACGAAGTTCAAATAACAGGAACAACTGCACAAGCATTAGGAGGAGCACCTTCTTATACAATTGGATTACCGGACAATGTTACAATTACAACTGATTTAACAGTAGGAGGTAACTTATACGTAAACGGAACTACTACACAGGTAAATACAGCTGAATTATTTGTAGAAGATAAATTTATTATACTAGCTTCAGGATCAGCTTCGGCAGGAGACGGTGGTATTATTATTGATAGAGGATCAGATGCAGCAGGAAATATTGCTTTTGGATACGATAGTGCAACAGATAGATGGGGTTATCAAAACGGATTAACAGACACAACCAATGCAATTACAATTGGAACAGATGGAGATAGTGCTTTTGCAGGATATGTATTTACAGAAGCAGCACACACATCAGCACCAACATCAGGAGAATTTGTAGCAGCAGGAGCAATCTACACAGCAACATCAGGAGATATTTTCATATATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8b76037646de186a0bbb95ac5ca17b60189946cd44a048b55bdd5a37a959d7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6284
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dynamics of Baltic Sea phages driven by environmental changes Hoetzinger,M., Nilsson,E. and Holmfeldt,K. — — GenBank