Protein

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Genbank accession
YP_009829781.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTTYTNIPRDITKLKDEKMDKSNNLSDLADRAAAWLNVRPIGSTPLAGDPVRDYDAATKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGVIEDSVWLADKFQRGKYSNGDGATTFRVPDKNGVQEGSIRALYGRGDGGMSDANGRVFESAAPNIYGRIASYSGSSYAQVFSDINQGAFRTSNDLYPAAAGDAIPMTGAISISGRYNTLEIDASRSSPIYGASNDEILTRNFVGVWVIRASGGFVAANTSWSVINGDAVRPGSGVRAYSGQVKAQYKIGTVVEADAGLRCDAYMDGLYYAILSVYNKTKGVTKDLAFDDTGTLNSDRYSARYGTMMAWSETGLVKGTFSTEEQAIGTNYAFNSILSGSQYSNAGYKTSAHFGLIHNDLGSFADSCWHVSGDADNRYGVRLKIQPNNNSIYFYSWWPNGAATYTLQLNAISDSRLKHDIKAIDATKSIEVLKGLEFQSFIYNNDEKSRIRRGVIAQQVETIEPLYVKTRRFYNDDGVEQEQKELDTTPMLLDTMHVVQDLIKRVEDLEEELKQLRANLVQ
Physico‐chemical
properties
protein length:582 AA
molecular weight: 64270,75870 Da
isoelectric point:5,33402
aromaticity:0,10309
hydropathy:-0,42560

Domains

Domains [InterPro]
DC_1651
STR
10–524
DC_1651 Coil
Coil
Unmapped
11–31
Coil IPR030392
IPR030392
CHP
473–573
IPR030392
DC_0409
RBD
504–582
DC_0409
YP_009829781.1
1 582
Architecture
STR
RBD
STR 10-524 | RBD 525-582
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009829781.1
1 582
Domain Start End Length (AA) Confidence
N-terminal 1 309 309 0,3186
Central domain 310 508 200 0,1469
C-terminal 509 582 73 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-309
Central
310-508
C-terminal
509-582

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SP15
[NCBI] 		2184265 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus SP15
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009829781.1 [NCBI]
Genbank nucleotide accession
NC_048627.1 [NCBI]
CDS location
range 81150 -> 82898
strand -
CDS
ATGACTACTTATACTAATATCCCTCGGGACATTACAAAACTTAAAGATGAAAAGATGGATAAAAGTAATAACTTATCCGATCTTGCGGACCGTGCAGCAGCATGGCTAAATGTACGTCCTATTGGGTCTACCCCTCTTGCGGGGGATCCTGTGAGAGACTATGACGCTGCAACTAAACGTTGGGTGGAGAATAAGATTAATACTGGCACAGTCGGTCCTACTATGAACGGCGTTATGAATTACGGGGTTGGTGATTTCCACCTTCGAGATAGTCGTGCGTATATCCAACCGTACGAAGTGGTTTCTGATGGACAACTTCTTAATAGAGCCGACTGGCCGGAGCTTTGGGCGTACGCTCAAATGGTTGGTGTTATAGAGGATTCGGTATGGTTAGCTGATAAATTCCAGCGTGGCAAATACTCTAATGGTGACGGAGCAACAACTTTTCGTGTTCCAGATAAGAATGGGGTGCAGGAGGGATCAATACGTGCTCTTTATGGCCGTGGAGATGGTGGTATGTCCGACGCTAACGGGCGTGTTTTTGAATCCGCTGCGCCTAATATCTATGGGCGTATTGCTAGTTATTCTGGCTCGTCATATGCTCAGGTATTCAGCGATATCAATCAAGGTGCATTTAGAACAAGTAATGATCTATACCCTGCTGCGGCAGGTGATGCAATCCCAATGACGGGTGCAATTTCAATATCTGGGCGCTACAACACCCTTGAGATTGATGCGTCACGCTCAAGCCCGATCTACGGGGCATCAAATGACGAAATCCTTACACGAAACTTTGTCGGCGTCTGGGTGATTCGTGCATCTGGTGGATTTGTTGCTGCGAATACCTCTTGGAGTGTGATCAATGGTGATGCTGTTCGCCCAGGTTCTGGAGTAAGAGCATACTCTGGGCAGGTAAAGGCGCAATACAAAATCGGCACCGTTGTTGAAGCTGATGCTGGCCTTCGTTGCGATGCGTACATGGATGGCCTTTATTATGCGATTCTGTCTGTATACAACAAGACAAAAGGGGTGACAAAAGACCTTGCCTTTGATGACACAGGTACATTAAACTCTGATAGATATAGCGCCCGCTATGGGACTATGATGGCTTGGAGTGAAACAGGTCTTGTTAAAGGTACATTTAGTACAGAAGAACAGGCTATTGGAACAAATTACGCTTTTAACAGTATTTTGAGTGGTTCCCAGTATTCTAATGCGGGGTATAAAACATCTGCACATTTTGGATTAATTCATAATGACTTAGGTTCCTTTGCTGATTCTTGCTGGCACGTATCGGGAGACGCGGATAACAGATATGGTGTACGTTTAAAAATTCAACCGAACAATAATAGTATTTATTTCTATTCTTGGTGGCCCAATGGCGCAGCAACGTATACTCTGCAGTTAAATGCTATATCTGATTCTCGTTTAAAGCATGATATTAAAGCTATAGATGCAACTAAGTCCATCGAGGTATTAAAAGGATTAGAATTCCAGTCCTTTATATATAATAACGATGAAAAATCTCGTATCCGACGTGGGGTTATTGCACAGCAAGTAGAGACTATAGAGCCACTCTATGTAAAGACTAGAAGATTCTATAATGATGACGGAGTAGAACAGGAGCAAAAGGAATTAGATACAACTCCAATGCTTCTTGATACTATGCATGTTGTGCAGGATCTTATTAAAAGGGTTGAAGACTTAGAGGAAGAACTCAAGCAATTAAGAGCAAACCTAGTGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d5d1bbf11cb2fc614ed2dfbca9875281e2bc768cd061ddb68804ecedd41fdb7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Escherichia phage E0157 Sato,K., Ohishi,K., Azam,A.H., Miyanaga,K. and Tanji,Y. 1997 — GenBank