Protein

View in Explore
Genbank accession
YP_010842813.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATNFGTVFPTRSAAEWRSLNPLLKEGQGAYEADTGALKIGDGTNVYADLPYFIGAVAELSDAQIEGLGLVTEEEAGTRYAPKTGGTYFVGDHGLKGDWVGGPGGSGTNDTAALMAGIASVPDGSKIVFDKTKTYRLDPMSLVGKDIELDFNGCTVVTKTMDASNLAAAQPFLSWSSEVGDELSMATAGANRGDTYITMNPFSAANQLSPGDYVLLRDRFPVANWQTGTNMAWVGVGEVAQVASVVASTGRVNLRSPLRHRYRSNGGSVPKVRRVIKPVSPKVRNLGKIMDTNPGGAYTGDVETGGAHLFYFYGCIEPEVHHVKADGFQNHVVNFNSCLRPYLYRGEGRNPFQVSSGHGYVCRFVHCVDGLAERLRGYGVRHVANYVGSVNCGTAWSWSFHPAGVSFQTHGLQSRDSFSIDDSVVGGDSSGWSHGNPQFGPDYGFRVVRPHYYGIQRGVLARSLSEGTFVIEPDIHTTLKGIEVSGGAKDTVVDLTSGLIEIFGSDAGSYAVHAADVDAAGTAFKPDGIAVIGKGRLIGPRAVVELDATNVAPGDVTIDTAQMITGDKTLGNVGFFGKAALAARPAATLELGTVLSDLGLREAGGAYQIITSGAVAFTGGLRFGSNVRTANTTLSAGNAPVNLCNADAGAITMTLFNTGTAGYRFLFKRTSGGSNNVTVQAGSGGSIDGQPSIVLDAQYKWVEVISSTTVGAWFVIGRG
Physico‐chemical
properties
protein length:719 AA
molecular weight: 75529,65530 Da
isoelectric point:6,03252
aromaticity:0,09040
hydropathy:-0,07566

Domains

Domains [InterPro]
SSF69349
STR
8–124
SSF69349 DC_0328
YP_010842813.1
1 719
Architecture
STR
STR 8-719
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010842813.1
1 719
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,9806
Central domain 103 555 454 0,9852
C-terminal 556 719 163 0,9107
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-555
C-terminal
556-719

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Commandaria
[NCBI] 		3038364 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010842813.1 [NCBI]
Genbank nucleotide accession
NC_079146 [NCBI]
CDS location
range 10621 -> 12780
strand +
CDS
ATGGCAACCAACTTCGGGACCGTGTTCCCGACTCGCTCGGCCGCGGAGTGGCGATCGCTCAACCCCTTGCTGAAAGAGGGCCAGGGAGCCTACGAGGCGGACACCGGCGCGCTGAAAATCGGGGATGGGACGAACGTCTATGCCGACCTCCCCTACTTCATCGGCGCCGTCGCGGAGCTGAGTGACGCCCAGATCGAGGGGCTCGGGCTCGTCACCGAGGAGGAGGCGGGCACCCGCTACGCCCCGAAGACCGGAGGGACCTACTTCGTCGGCGACCATGGGCTGAAGGGGGACTGGGTCGGGGGCCCCGGCGGCTCCGGAACCAACGACACCGCAGCCCTGATGGCGGGGATCGCCTCGGTGCCGGACGGCTCGAAGATCGTCTTCGACAAGACCAAGACCTACCGGCTGGACCCGATGAGCCTGGTAGGCAAGGACATCGAACTCGATTTCAATGGGTGCACGGTCGTCACGAAGACGATGGACGCGAGCAACCTCGCTGCGGCACAGCCATTCCTGTCCTGGTCCTCGGAGGTCGGCGACGAGCTTTCGATGGCCACGGCGGGAGCGAACCGGGGCGACACCTACATCACCATGAACCCCTTCTCGGCGGCCAACCAGCTCTCCCCCGGGGACTATGTGCTGCTGCGCGATCGCTTCCCGGTGGCGAACTGGCAGACCGGCACCAACATGGCCTGGGTCGGAGTGGGAGAGGTCGCGCAGGTGGCCTCGGTCGTGGCCTCCACCGGGCGAGTGAACCTTCGGAGCCCCCTGCGACACCGATACCGGTCCAACGGCGGGTCGGTGCCCAAGGTGCGCCGGGTGATCAAGCCGGTCTCGCCGAAGGTGCGCAACCTCGGCAAGATCATGGACACCAACCCCGGCGGGGCCTACACCGGCGACGTCGAGACCGGTGGTGCACACCTGTTCTACTTCTACGGCTGCATCGAGCCCGAGGTTCACCACGTCAAGGCCGACGGGTTCCAGAACCACGTGGTCAATTTCAACAGCTGCCTGCGGCCCTACCTCTATCGCGGAGAGGGGCGAAACCCCTTCCAGGTCAGCTCCGGACACGGATACGTCTGCCGCTTCGTGCACTGCGTCGACGGCCTCGCGGAGCGCCTCCGCGGGTACGGGGTCAGGCACGTGGCGAACTACGTCGGATCGGTGAACTGCGGCACCGCGTGGTCGTGGTCCTTCCACCCGGCCGGAGTCTCCTTCCAGACCCACGGCCTCCAGTCCCGCGACAGCTTCTCGATCGACGACTCCGTCGTCGGCGGAGACTCCTCGGGATGGTCGCATGGCAACCCGCAGTTCGGCCCCGACTACGGCTTCCGAGTCGTCCGGCCGCACTACTACGGCATCCAGCGCGGCGTGCTGGCTCGCTCCCTGTCCGAAGGCACCTTCGTCATCGAGCCGGACATCCACACGACCCTGAAGGGGATTGAGGTCTCCGGAGGCGCGAAGGACACCGTCGTCGACCTAACCTCCGGGCTGATCGAGATCTTCGGCTCGGACGCGGGCTCCTACGCGGTCCACGCCGCCGACGTCGACGCCGCGGGAACGGCATTCAAGCCGGACGGGATCGCGGTGATCGGCAAGGGCCGACTGATCGGGCCGCGCGCCGTCGTCGAACTCGACGCGACCAACGTGGCTCCTGGCGATGTAACGATCGACACCGCGCAGATGATCACCGGCGACAAGACCCTCGGGAACGTCGGGTTCTTCGGCAAGGCCGCGCTCGCCGCTCGACCAGCGGCCACCCTCGAACTGGGCACGGTCCTGTCGGATCTGGGCCTGCGCGAGGCGGGAGGGGCCTACCAGATCATCACCTCCGGAGCGGTGGCGTTCACCGGCGGCCTCCGTTTCGGGTCGAACGTACGTACCGCAAACACCACTCTCTCGGCAGGGAACGCGCCGGTCAACCTCTGCAACGCCGACGCCGGGGCGATCACGATGACCCTGTTCAACACCGGCACGGCGGGCTACCGATTCCTGTTCAAACGGACCAGCGGCGGGTCCAACAACGTCACGGTCCAGGCGGGCTCCGGCGGCAGCATCGACGGCCAGCCCTCGATCGTCCTGGACGCGCAGTACAAGTGGGTCGAGGTGATCAGCTCGACCACCGTCGGAGCCTGGTTCGTCATCGGCCGAGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d43df6ba5fd86b57d984ee9e919bc411581ff6c2ff928ad3ec8bc06b36910378
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50