Protein

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Genbank accession
XHB39087.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MMADCDNIPTLQTVQDFNTDAKVLTEVVTSDSELTVLPDSAGNTHKTLFGLQSEYRAAIQAAGGVPLGVWTAGVTEFNAYNEYAVYNGIPYKPRASTTLPYTAQSSDPTIVPDSTFVQPYVDSLVSVARTNNAPIDSVVYLATNQVVGVNYFYDIVTQITYYSPVEISGSITDTGSDVDGFRNITVDSAQYVIFNSSFIALLQSSGVSLDYSPSEVSILKESISTSASVLYDESASVRLTAWDTLTTPYVITSWSDNIFGGVDVVTDQGTFEFVRPSVKAARDQGDAAGWGVVIDSVTDSTNQILKAISDLGEGDDLFIPHPCAFGQVTVNKDLNIKGYSGDKSNRLITLIGADAGFITSGRRIKVTYRNLYYLCDGDSVDGLTNRQIPQSVGSGADIDEIEYLDCYAKNCVIGFSMAFESGRTLRKKAIMEDCEVETTYGTSSGEGYGLHAANDKQTHGYDSKIYINRNLIDGATRHSIYASRSGGYVITNNYVKNHRALTFDGNIRPAILVGRASDTVGYGNTYEDCYGVCLAIVPETVESVDYDCANVHFWGETFINPKELGAVAFGLSARNGGSIIGASVKNSSFRMNDNAIPLLLSYYGFDLDFKNNSAVYRGTIPAFNVFVLVGVDYTGYPSLYSDRWNFTENTIDIYSNTGAVTEYIITRNIGAYINLDNEFKNTNTELVLSDGAMTKNRITINGTRYLSAGISTPVGNITPLKTGERIVLLAPDPDTVWLSTGRTNNDWLQLG
Physico‐chemical
properties
protein length:751 AA
molecular weight: 81595,72560 Da
isoelectric point:4,52384
aromaticity:0,10386
hydropathy:-0,12130

Domains

Domains [InterPro]
DC_1559
ATT
1–165
DC_1559 IPR011050
IPR011050
STR
285–661
IPR011050
DC_1861
RBD
659–751
DC_1861
XHB39087.1
1 751
Architecture
ATT
STR
RBD
ATT 1-165 | STR 280-661 | RBD 662-751
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB39087.1
1 751
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,9928
Central domain 302 682 382 0,9891
C-terminal 683 751 68 0,8987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-682
C-terminal
683-751

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpS_LMAVpSH
[NCBI] 		3344729 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB39087.1 [NCBI]
Genbank nucleotide accession
PQ284951.1 [NCBI]
CDS location
range 32526 -> 34781
strand -
CDS
ATGATGGCTGATTGTGACAACATTCCTACCCTGCAGACAGTGCAGGACTTTAATACTGACGCTAAGGTTTTGACTGAGGTTGTCACCAGTGATTCCGAACTGACAGTATTACCTGATAGTGCTGGTAATACTCATAAAACCTTATTCGGTTTGCAGTCTGAATACCGAGCTGCAATTCAAGCGGCCGGTGGCGTTCCTCTCGGGGTGTGGACTGCAGGTGTGACAGAATTTAACGCGTACAACGAGTACGCTGTGTACAACGGCATTCCTTACAAGCCCCGCGCATCTACGACTCTCCCATACACCGCACAAAGTTCCGACCCGACCATTGTACCGGATTCGACATTCGTTCAGCCTTATGTAGACTCACTAGTTTCTGTAGCCCGCACCAATAACGCACCGATCGACTCAGTAGTTTACTTAGCAACAAATCAAGTTGTTGGAGTTAATTACTTTTACGACATCGTGACTCAGATTACGTATTACTCTCCTGTAGAAATATCAGGCTCTATTACAGATACGGGTTCTGACGTAGATGGATTCAGAAATATTACAGTAGATTCAGCTCAATACGTTATCTTTAACTCTTCCTTTATAGCTCTATTGCAGTCGTCAGGCGTGTCACTTGATTATTCACCTTCTGAGGTATCAATCCTTAAAGAATCAATATCGACTAGTGCTAGCGTTTTGTATGACGAGAGTGCGAGCGTGAGGCTAACAGCATGGGATACATTAACAACACCGTATGTCATCACATCATGGTCGGATAACATTTTCGGAGGTGTTGATGTTGTAACAGACCAAGGAACATTTGAATTCGTCAGACCTTCCGTTAAGGCCGCGCGTGACCAAGGGGATGCTGCTGGTTGGGGGGTTGTGATTGATTCAGTAACTGACTCAACAAACCAAATTCTTAAGGCAATATCTGACCTTGGTGAAGGGGATGATCTTTTCATTCCGCACCCATGTGCTTTCGGGCAAGTCACTGTAAATAAAGATTTAAACATTAAAGGGTATAGCGGAGACAAGTCAAATAGATTAATAACTTTGATCGGGGCTGATGCCGGGTTCATTACGTCAGGAAGAAGGATTAAAGTCACATACCGGAATCTATATTACCTTTGTGATGGTGATTCGGTTGACGGCCTCACAAACCGACAAATTCCGCAATCCGTTGGTTCTGGAGCTGATATAGATGAAATTGAATATTTAGATTGTTACGCAAAGAACTGTGTGATCGGGTTTTCAATGGCTTTTGAGTCTGGGAGAACTTTGCGCAAAAAAGCAATCATGGAAGATTGCGAAGTGGAAACAACTTATGGAACTTCCAGTGGTGAAGGGTACGGTCTTCATGCTGCAAATGATAAACAAACACATGGTTACGACTCTAAAATATACATCAATCGAAACTTGATTGACGGGGCCACGAGACATTCAATCTATGCCAGCCGTTCTGGCGGATATGTTATCACGAATAATTACGTAAAAAATCACAGAGCGTTGACTTTCGATGGAAATATTAGGCCTGCTATTTTAGTCGGTCGAGCATCGGATACAGTAGGTTACGGAAATACTTATGAAGACTGTTATGGTGTTTGTCTCGCTATTGTACCAGAAACAGTAGAATCTGTTGATTATGATTGCGCCAACGTTCATTTTTGGGGTGAGACATTCATTAATCCTAAAGAATTAGGGGCTGTTGCGTTTGGTCTTTCAGCTAGGAATGGAGGGTCTATAATTGGCGCTAGTGTAAAAAATTCATCTTTCAGAATGAATGACAACGCGATACCTTTACTTTTGTCTTATTACGGGTTTGACCTAGACTTTAAGAATAACTCAGCAGTTTACAGAGGAACCATTCCGGCATTCAATGTCTTCGTACTGGTTGGCGTTGATTATACTGGATACCCTTCTCTTTATTCAGATCGATGGAACTTCACTGAAAATACGATAGATATATACTCAAACACTGGGGCCGTTACAGAATATATTATAACCCGTAACATAGGTGCGTACATAAACTTAGATAATGAGTTTAAGAATACTAACACTGAATTGGTTTTAAGTGATGGAGCTATGACAAAAAATAGAATCACAATTAACGGAACAAGATACTTATCGGCGGGAATATCAACTCCTGTAGGTAACATAACACCGTTAAAAACAGGTGAGAGAATTGTACTACTAGCCCCGGATCCTGATACGGTATGGCTGTCGACAGGAAGGACAAATAATGACTGGCTGCAATTAGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d0c4a6198344718b1aabcd1a63ad936f221a1edff90a7d2d5cfee4d7429999d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7081
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50