Protein

View in Explore

Genbank accession

AJA73309.1 [GenBank]

Protein name

host specificity protein J

RBP type

Evidence RBPdetect2

Probability 0,90

Protein sequence

MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGFKSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKKNGAIVRTVTDERISRLRLTLGVRSLFRQNNQGDTNTTNVDLKITIGTRQYSHSFNGKYSSQYLESVVFDNLPPVPFNISVERLTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGISFDSEYFNNIPTRNYLIKAKKVKVPSNYDPVKRTYTGFWDGTFKVAWTNNPAWEIYDLAPILSKMLGVEISFDKWALYDVSRYCDQLVPDGMGGQEPRFTCDVWLTEVKTAYDLLNDFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVGGFERSYSARKSRHNAVQVTYSDKTNGYESAIEYVSDDEEIKKHGLNLSQVTAFGCTSRGQAYRTGKWILETEKREKETITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAINGRKVTLDREISIDNASYFTYINGEATHSSIKIQSVNGKEITLDSTPTGLETYGVWSLSTKQISSGLYRSISIVENADGTNTITALQHEPQKEAIVDNAAHFVETARTLYKAPQINAVEVSTGYDGKLYISSDISSGDGKLTYDIKITKDGNFYQFKKGLADPNIELSDLPNGDYSVIIYGKNAKGQIVTEKTQTFTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAAETDNFALAKKIAKVTARTYAHTLKGNKVVRYYWLRHARGINVGPFYQQQGVRGESAVDLDARLTELNTQLSRNIVNEVFDVAAPARGLELVKTVANLTDKGTKLASSQVYNQADGKLYTWNGTAYSATVAAEDVTGKLSKSKIDTSLISQLTGADNTANLARRLAETAQSNINQEITNRQDAVTAEANNRTKAIQAESANLTKKIQAEATARGAAVTQLQNVDAQQAQLISAVTAKADNALSGLEEEKTARANADKAESQAREALTARMGAAESNIVTIQRTVANNAQSISEVSQNLNAKIDNINIGGRNLLRDSEFNAYNKWGSPQIEFAENANRRTIKVTSTGTNGPVGIVSSNRHSTSYFQQGETYTLSLFARGSKALDYLYLMRQDGNNVRLPVINVASETEFNYYKLTFKAPFTTQQGYFLVGFFQSTPNQFVEFHSLKLEKGNVATDWTPAPEDVDSAVSAVSADLTSYKQTQAATDSAQAQQLNQLSVNLTKAESNLNAKITEEKNARVNADKANADKLTDITSRVANAESTITNFQSTKANKSEVASIAQQNLQSIWRTDAQSAVDALKIGGANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFVTQAGTGHFGVTQGTQKATTRIRQGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFRLPTLPLTASLSQRPKVTFTAPWTSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATGWTPTAKDIDDKVSAVQSNLTAYQAAQAKADQAKATQISGLTTRMGAAESNLTRTERAVTELNQTTVTTLRDLTARTKTTEGSLSRLETAKANKTEVASIAQSSLQSIWKADAKSAVDSLSIGARNLLIDSTYNQHINYNTKMSSITRTVYRGNMLIRLGMLGGAGVAGIVQAPAAQVSNIRQGQEYTLSLNVQGTAGIQKTGLNYVFLMRADGANQRLATIPVIASLANRPKITFTAEWTSERAYLLVGVNGTYENTDWLAFHSVKLEKGNVATDWTPAPEDVESSVSAVSAKIDTIQETLANADSALSSRIDTVTASVGSNLAKITQVSNAVAGVDGKLSSTHTIKTETIAGGRKAIAGIALGAAADNRNAESSVIVMADKFEVVKNAQDGQPVRLFGVAQNKVAINGDLIATGTIKGSHIDADSVRAGILTAGAIRTEHLAAGQISADKLAIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRLNIDTRTIFNRNEQDNYGLKKGGLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNKKYIASVWLACHRGQAKLVIENIEKPGGAYLGRIGNSEVITGYSAHQGEFKNMKRVKVVFTAPTSGCIRFALRLDNIQGKANPFLFARRPMLEEASDNVTDITQPSPWQNAGVTAIHGGSIVTNTVTAQQIAANTITANEIAAGTIAARNMAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGTTITGNTISGGSINGTTISGTTISGGTIKGARLEGATGKFTGELEVSQLIGGGVIEQVTGKLKYSHRNRIYEGQEYGENSSSPIYRHEYIYKATVTINAAPTRRYIEIIGSESFILEANQSITKTIEKSLNRNASGSSLDFIVLAYSISTAKYISIS

Physico‐chemical properties

protein length:	2349 AA
molecular weight:	254892,88750 Da
isoelectric point:	7,95993
aromaticity:	0,07407
hydropathy:	-0,32648

Domains

Domains [InterPro]

DC_0463
STR
4–1061

DC_0463 Coil DC_0568 IPR015406 G3DSA:2.60.120.260 DC_2102

IPR053171
Unmapped
9–1023

IPR053171 DC_1746 DC_2138

IPR055385
ATT
87–206

IPR055385 IPR032876 DC_1441 Coil DC_1502

AJA73309.1

1 2349

Architecture

STR

ATT

STR

ATT

STR

RBD

STR 4-86 | ATT 87-206 | STR 207-324 | ATT 325-487 | STR 488-2241 | RBD 2242-2348 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0463	STR	DC_0463	4	1061	Novel HMM	DC_0463	Central	Low	Positional only	26 proteins / 26 hits
IPR053171	Unmapped	-	9	1023	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	87	206	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	325	487	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
DC_1441	STR	DC_1441	970	1285	Novel HMM	DC_1441	Central	Low	Positional only	9 proteins / 9 hits
Coil	Unmapped	-	1211	1231	Coils	Coil	-	-	-	-
DC_1746	STR	DC_1746	1222	1536	Novel HMM	DC_1746	Central	Low	Positional only	92 proteins / 92 hits
DC_0568	STR	DC_0568	1457	1743	Novel HMM	DC_0568	Central	Low	Positional only	135 proteins / 135 hits
Coil	Unmapped	-	1497	1517	Coils	Coil	-	-	-	-
DC_2138	STR	DC_2138	1660	2014	Novel HMM	DC_2138	Central	Low	Positional only	5 proteins / 5 hits
IPR015406	RBD	DC_0135	1778	1885	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1911	2081	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_1502	STR	DC_1502	1944	2241	Novel HMM	DC_1502	Central	Low	Positional only	9 proteins / 9 hits
DC_2102	RBD	DC_2102	2217	2348	Novel HMM	DC_2102	C-terminal	Low	Positional only	10 proteins / 10 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Mannheimia phage vB_MhS_1152AP2 [NCBI]	1572747	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Mannheimia haemolytica [NCBI]	75985	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Genbank protein accession

AJA73309.1 [NCBI]

Genbank nucleotide accession

KP137437 [NCBI]

CDS location

range 17649 -> 24698
strand +

CDS

ATGGGATTATTTAGTCGTAAGAGAAAAAATCATACTCCTAAAGAAGCACCGGAAACCGGTCGCTCTAAACAGATTGTAAATATTGTGGAATTGCTGTGCGAGGGCGAAATTGAAGGCTTGGTAGATGGCTTTAAATCGATTTACTTAGACGGCACGCAGATCCAAAACGATGACGGCACCTATAATTTTAATAATGTGAGCGGTCAGCTAAATGTCGGTACGCAAGATCAAGAGGTATTAGAAGGTTACGACAGCTCACAAAATGAAGTGAGTGTGGGTGTAGAAGTCAAGAAAAAAAACGGTGCAATCGTCCGCACCGTTACTGATGAACGCATCAGCCGTTTGCGTTTAACGTTGGGCGTGCGGTCACTATTCCGTCAAAATAATCAAGGCGATACCAATACCACCAATGTTGATTTAAAAATCACGATTGGCACACGGCAATATTCGCATAGCTTTAACGGCAAATACAGCTCGCAATACCTTGAATCTGTGGTGTTTGATAACCTGCCGCCTGTGCCATTTAATATCTCAGTTGAGCGTCTAACCGAGGATAGCAATTCGCAACGCTTACAAAACGGTACAATTTGGAGTAGTTACACCGAAATTATCGATACCGAGTTTACCTACCCTAATTCAGCGGTTGCCGGTATCAGTTTTGATTCGGAGTATTTTAATAATATCCCGACCCGAAACTACCTAATTAAAGCGAAAAAAGTCAAAGTGCCAAGCAATTATGATCCAGTTAAACGCACTTACACCGGCTTTTGGGACGGCACATTTAAAGTTGCGTGGACGAACAACCCTGCTTGGGAAATTTACGATTTAGCTCCGATTTTAAGCAAAATGCTTGGGGTTGAAATCAGCTTTGATAAATGGGCGTTGTATGACGTCTCTCGCTATTGCGATCAGCTTGTGCCGGACGGTATGGGCGGACAAGAGCCACGTTTTACCTGTGATGTATGGCTCACGGAAGTTAAAACTGCCTATGATTTATTAAATGATTTCTGCTCGGTATTCCGTGCGATTCCGATTTGGACCGGCACGGAAGTCTCCGTGATTATCGACCGTCCGCGTGATCCGGTTTGGACTTACACAAATGCTAATGTAGTTGGTGGATTTGAACGATCCTACTCTGCTCGCAAATCACGCCATAATGCAGTGCAAGTTACTTATTCGGATAAAACAAATGGCTATGAAAGTGCGATTGAGTACGTTTCAGACGATGAAGAAATCAAAAAACACGGCTTAAATTTAAGCCAAGTAACTGCCTTTGGCTGTACATCTCGTGGGCAAGCATACCGTACCGGTAAATGGATTTTAGAAACCGAAAAACGAGAAAAGGAAACCATTACCTTTACCGTTGGACGTGAAGGCTTAATGCACTTGCCGGGCGATATTATCCGTGTTGCCGACAGCCATTATGCCGGTACGGAAATTGGCGGACGTGTACTGGCGATTAATGGGCGAAAAGTTACCCTTGACCGTGAAATTAGCATTGATAACGCCAGTTATTTTACCTATATCAACGGTGAGGCAACGCACTCTAGCATTAAAATCCAATCGGTAAACGGTAAAGAAATCACGCTAGATAGCACGCCAACCGGCTTAGAAACCTACGGCGTATGGTCGTTATCGACTAAACAAATCAGCTCGGGCTTATACCGCTCCATCTCGATTGTTGAAAATGCGGACGGTACGAATACGATTACTGCATTGCAACACGAACCGCAGAAAGAAGCGATTGTAGATAACGCTGCTCACTTTGTGGAAACGGCGAGAACGCTTTACAAAGCCCCGCAAATTAACGCAGTAGAAGTCTCGACTGGTTATGACGGCAAGCTCTATATCTCCAGTGATATTAGTTCTGGCGACGGCAAGCTGACCTATGATATTAAAATCACCAAAGATGGCAATTTTTATCAATTCAAGAAAGGATTAGCCGACCCAAATATTGAGTTGAGCGATTTACCGAATGGCGATTACAGCGTGATTATTTACGGTAAAAATGCCAAAGGGCAAATCGTCACCGAAAAAACACAAACCTTTACTATTGATCGACCTCCAGCTCCGACCGGTGTAGTAGTAACAGGTGGATTAGGGCAAATTACCCTCGAATGGGATTGGGTAAATGAGGTTACGCAAACCGAGATTTTCGCAGCGGAAACTGATAATTTCGCCCTTGCAAAAAAAATCGCAAAAGTGACCGCTAGAACCTACGCTCACACACTAAAAGGTAACAAGGTTGTACGCTATTATTGGCTAAGACATGCTAGAGGCATTAATGTCGGACCGTTTTATCAACAACAGGGGGTAAGAGGCGAAAGTGCGGTTGATTTGGATGCTCGATTAACCGAATTAAACACTCAGCTATCACGCAATATTGTTAATGAGGTTTTTGATGTTGCTGCACCGGCACGAGGTTTAGAGCTGGTCAAAACAGTCGCTAATTTGACCGACAAAGGTACTAAACTGGCGTCATCTCAAGTTTACAATCAGGCTGACGGCAAGCTCTATACTTGGAACGGTACAGCATACTCAGCTACAGTGGCTGCGGAAGATGTTACCGGCAAATTATCAAAATCTAAAATTGATACGTCCCTTATTTCGCAATTAACAGGTGCAGATAACACCGCAAATTTGGCAAGAAGATTAGCGGAAACAGCTCAAAGCAACATTAACCAAGAGATTACTAACCGACAAGATGCCGTTACTGCCGAAGCAAATAACCGTACTAAAGCCATTCAAGCCGAAAGTGCGAATTTAACGAAAAAAATTCAAGCTGAAGCAACCGCTCGTGGGGCTGCTGTTACACAGTTACAAAATGTTGATGCTCAACAAGCACAGTTGATTTCTGCTGTCACAGCAAAAGCTGATAATGCTCTTTCAGGCTTGGAAGAAGAAAAAACAGCACGAGCAAACGCCGATAAAGCGGAGTCTCAAGCACGTGAAGCATTAACAGCAAGAATGGGAGCAGCTGAAAGCAATATCGTAACTATTCAACGTACGGTAGCAAATAATGCCCAAAGCATTAGTGAAGTCAGTCAGAATTTAAATGCTAAGATTGATAATATTAATATCGGCGGTCGGAATTTATTAAGAGACAGCGAGTTCAATGCGTACAATAAATGGGGTAGCCCACAAATTGAATTTGCTGAAAATGCAAATCGCCGAACTATCAAAGTAACCTCAACAGGTACTAACGGTCCTGTTGGTATTGTTTCATCTAATCGCCATTCCACATCTTATTTCCAACAAGGAGAAACTTATACACTCTCATTATTTGCTAGAGGAAGTAAGGCACTAGACTATCTCTATCTAATGCGTCAAGATGGGAATAACGTTAGATTACCAGTGATTAACGTTGCCTCTGAAACAGAGTTCAATTATTACAAACTGACGTTCAAAGCACCGTTTACCACACAACAAGGCTATTTCTTAGTTGGTTTTTTCCAATCTACTCCAAATCAATTTGTTGAGTTTCATAGTTTAAAGCTAGAAAAAGGCAACGTAGCCACAGACTGGACGCCAGCACCGGAAGATGTGGACAGTGCGGTTAGTGCAGTTTCCGCTGATTTAACGAGTTATAAACAAACTCAGGCGGCTACCGATTCAGCACAAGCACAGCAACTTAATCAGTTATCTGTGAACTTGACCAAAGCAGAGAGCAATTTAAATGCCAAAATCACGGAAGAAAAAAATGCTCGTGTGAATGCCGATAAAGCGAATGCAGATAAACTCACAGACATAACAAGCCGTGTTGCAAATGCGGAATCAACTATTACCAATTTCCAATCAACCAAAGCGAATAAAAGTGAGGTGGCAAGTATTGCCCAGCAGAACTTACAGAGCATTTGGCGCACCGATGCGCAAAGTGCGGTGGATGCCTTGAAAATCGGTGGTGCAAATCTACTGGTTGATAGTGAGTATTTGACGACAGCCCGTTGGGGCGGTAGCTCACGAGTGGCAAGCTCGCAATATGGTGATCGTCGCTTGACTCAAGTGTTTGTGACCCAAGCAGGCACAGGGCATTTTGGTGTGACTCAAGGCACACAAAAAGCCACTACGCGTATTCGTCAGGGTGAAACCTATACCTTGTCACTAAATGCGCAGGGGACGGCAGGTTTTACCCGCACAGGGTTAAACTATGTGTACCTTATCCGCGAAGATGGTGGCAATTTTAGATTGCCAACTTTGCCGCTTACTGCATCATTGTCCCAACGCCCTAAAGTGACATTTACTGCGCCGTGGACGAGCAATCAAGTTCGGTTACTGATTGGCGCAAATGGCATATTTGAGGCGACAGACTGGTTCGCATTTCACAGCGTTAAGCTCGAAATGGGTAATGTTGCCACAGGCTGGACACCAACCGCCAAGGATATTGACGACAAAGTATCAGCGGTTCAGTCCAACCTCACCGCTTATCAGGCGGCACAAGCTAAAGCAGATCAAGCCAAAGCTACGCAGATTTCGGGGCTCACAACCCGAATGGGGGCAGCGGAAAGTAACCTCACTCGCACCGAACGGGCAGTGACGGAACTTAATCAGACAACGGTGACGACACTGCGTGATCTAACCGCGCGCACCAAAACAACGGAAGGTTCGCTCTCTCGTTTGGAAACCGCCAAAGCAAATAAAACTGAGGTGGCAAGTATTGCTCAAAGCTCCTTACAGTCAATTTGGAAAGCTGATGCAAAATCTGCCGTTGATTCACTTTCTATCGGTGCAAGGAACTTACTGATAGACAGTACTTACAACCAACACATCAACTACAATACAAAAATGTCATCAATCACACGCACAGTCTATCGCGGCAATATGTTGATACGACTCGGAATGCTTGGTGGCGCAGGTGTGGCCGGTATTGTACAAGCACCAGCCGCTCAAGTAAGTAATATCAGACAGGGTCAAGAGTACACACTTAGCCTGAATGTACAGGGTACAGCCGGCATACAAAAAACGGGGCTCAACTATGTATTCTTGATGCGTGCTGATGGAGCTAACCAACGATTAGCAACAATACCTGTTATAGCTAGTTTAGCAAACAGACCTAAAATAACCTTTACTGCCGAATGGACAAGTGAGCGAGCCTATCTGCTTGTTGGTGTAAATGGTACTTATGAGAATACAGATTGGTTAGCGTTTCACAGCGTAAAACTTGAAAAAGGCAACGTAGCGACAGATTGGACGCCAGCCCCTGAAGATGTGGAAAGCTCCGTGAGTGCAGTTTCGGCTAAAATTGATACTATTCAGGAGACTTTAGCGAATGCCGACTCTGCATTAAGCTCTCGTATTGATACCGTTACTGCTTCTGTTGGCTCAAACTTGGCAAAAATTACTCAAGTGAGTAATGCTGTAGCCGGTGTAGATGGTAAATTATCGTCTACTCATACCATCAAAACCGAAACCATTGCCGGTGGACGTAAAGCGATTGCCGGTATCGCACTTGGTGCCGCGGCAGACAATCGCAATGCAGAATCCTCTGTCATTGTAATGGCAGACAAATTTGAGGTAGTAAAAAATGCTCAAGACGGCCAACCGGTACGATTGTTTGGTGTGGCTCAAAATAAAGTTGCGATTAATGGGGATTTAATTGCAACAGGTACAATTAAAGGTAGCCACATTGATGCAGACTCAGTAAGAGCCGGAATATTGACGGCGGGAGCTATCCGTACGGAACACCTGGCAGCAGGGCAAATATCGGCGGATAAGTTAGCGATTGGGCTAGGTGGGAATTTGCTGGTTAATCCTATTTTTGCAACACCCGATTTGTCAATAGCTCCGTTTGGCTGGAACTACTGGCGAGGAGAAGTTGGTGATCGGCTAAATATTGACACCCGTACTATTTTCAATAGGAATGAACAAGATAATTACGGACTAAAAAAGGGAGGACTACCAAATGAGTTAGTATTTTCGATGCGGTATAGCACTACAAAGGAAACCTCTGATACTGGGCGAATTGGGTGGTTATCTCAGGATATTAATGTTGTGCCTAATAAAAAATATATTGCCTCCGTATGGTTAGCTTGTCATCGTGGACAAGCTAAATTAGTCATTGAGAATATCGAAAAACCTGGTGGTGCTTACTTAGGTCGGATAGGCAACAGCGAGGTAATTACTGGCTATAGTGCTCATCAAGGCGAATTTAAAAATATGAAACGGGTTAAGGTTGTATTTACTGCACCTACTTCAGGCTGTATTCGTTTCGCATTACGATTAGATAATATTCAAGGTAAAGCTAATCCATTTTTATTTGCTCGTAGACCAATGCTTGAGGAGGCTAGTGATAATGTTACAGATATCACTCAGCCTAGCCCTTGGCAAAATGCCGGTGTAACCGCTATCCACGGTGGCTCAATAGTTACTAATACCGTTACTGCTCAACAAATTGCAGCAAATACCATTACCGCCAACGAAATCGCAGCCGGCACGATTGCAGCTCGAAATATGGCAGCAAACTCGATTAATGCAAGTCATATTGTGGGGAGTTCGATCACTGCGGATAAGCTAAATGTAAACAATTTAGCGGCAATATCGGCAAATCTTGGTAAGGTAACTGCTGGTACAATTACAGGTACGACAATTACTGGTAATACAATTAGTGGCGGAAGTATTAATGGTACAACAATTAGCGGTACAACTATCTCTGGCGGCACAATAAAGGGTGCAAGATTGGAGGGGGCTACTGGCAAATTTACCGGCGAACTTGAAGTATCTCAATTAATAGGGGGAGGTGTTATAGAGCAGGTTACAGGCAAATTAAAATATTCACATCGTAATCGCATTTATGAGGGGCAAGAATATGGAGAAAACTCCTCCTCTCCAATTTATAGACACGAATATATCTATAAAGCAACTGTCACCATAAATGCAGCGCCGACAAGGAGGTATATTGAAATCATCGGAAGTGAGTCATTCATTTTAGAAGCAAATCAATCAATCACAAAAACAATAGAGAAATCATTAAATAGAAATGCAAGTGGTAGCTCTTTAGATTTTATTGTTTTAGCCTATTCCATTTCGACGGCTAAATATATCTCTATCAGTTAG

Genome Context

Tertiary structure

PDB ID

c968a88324b5b714fd87f27a566d1c4144bab39ad5565ba1686ab696222dd58c

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6434

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence