Protein

View in Explore
Genbank accession
WVO01529.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFTRILSYGNEVKAPTILGERVQVNYSAAWYLHRNGDLYAIGQNNLGQLGTGDTTNRTSWTKVLTGVKRYFGGVHGTLAIDEDNIMWYTGSTYGMPIAQNTRTFVNVTKYFSDFGVSPDDIKSVYIAEGIRVLLNNGKWFFYGSNSAGCFGTGSTASVTKFTYSSIENVQYMSCGFNTTCLILSDGSCYYAGTMMLSGTTPTSVPTFTKTLDDVLYTANTFYTTYYFMKDGSIRTASINTQGQGSVGNTNPVLNSVQIRTQFDPSVPLRVIGSLTNSAGMSPMIWINNQIWRCGFNIYGQCGNGAASSAQATLTPMIFGTVSNIVSFGGDNLFSMVIDNNDDMFVCGNTPINGISFYNRLTRLADEKMPWK
Physico‐chemical
properties
protein length:373 AA
molecular weight: 40872,64690 Da
isoelectric point:7,49817
aromaticity:0,12601
hydropathy:-0,09196

Domains

Domains [InterPro]
DC_0433
ATT
1–133
DC_0433 IPR009091
IPR009091
STR
14–196
IPR009091 IPR009091
IPR009091
STR
27–94
IPR009091 IPR051553
IPR000408
STR
38–85
IPR000408
WVO01529.1
1 373
Architecture
ATT
STR
ATT 1-133 | STR 134-362 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01529.1
1 373
Domain Start End Length (AA) Confidence
N-terminal 1 56 56 0,0653
Central domain 57 330 275 0,6467
C-terminal 331 373 42 0,2541
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-56
Central
57-330
C-terminal
331-373

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01529.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 49280 -> 50401
strand -
CDS
ATGATACCATTTACAAGAATATTAAGTTATGGCAATGAAGTTAAAGCACCGACTATATTGGGTGAACGAGTTCAGGTAAATTACAGTGCAGCATGGTATTTACACCGTAATGGTGATCTATATGCAATTGGTCAGAATAACTTGGGTCAATTAGGAACTGGTGATACAACGAACCGAACATCTTGGACTAAGGTATTAACTGGAGTGAAAAGATATTTCGGTGGTGTACATGGAACACTGGCTATAGATGAAGATAATATAATGTGGTACACTGGAAGTACATATGGTATGCCAATAGCACAAAATACAAGAACCTTTGTTAATGTAACAAAGTACTTTTCAGATTTTGGGGTATCACCAGATGATATAAAAAGTGTTTACATTGCTGAAGGTATTAGAGTATTATTGAATAATGGAAAATGGTTCTTTTATGGAAGCAATAGTGCGGGGTGTTTCGGTACTGGTAGTACTGCTAGTGTTACTAAATTCACATATAGTTCAATCGAAAACGTTCAGTACATGTCCTGTGGATTTAATACAACCTGTTTAATATTAAGTGATGGAAGCTGTTATTATGCAGGAACGATGATGTTATCTGGTACTACGCCAACCTCAGTACCTACATTTACAAAAACATTGGATGATGTATTGTACACTGCTAATACGTTTTATACAACATATTATTTTATGAAAGATGGTTCTATACGAACTGCATCAATTAACACGCAAGGTCAAGGTTCTGTTGGTAATACGAATCCAGTACTTAATTCAGTACAGATCCGTACACAATTTGATCCTTCTGTACCATTAAGAGTAATTGGTTCTTTAACAAATAGTGCGGGTATGTCACCGATGATATGGATTAACAATCAAATATGGCGTTGTGGATTTAATATCTATGGACAATGTGGTAATGGTGCAGCTTCATCAGCACAAGCTACACTTACACCAATGATATTTGGTACAGTATCTAATATTGTATCATTTGGTGGTGATAATTTATTTTCAATGGTTATTGATAATAACGATGATATGTTTGTATGTGGTAATACACCAATAAATGGAATTTCATTTTACAATAGGCTTACTCGACTTGCCGATGAAAAAATGCCTTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8a5ce7c904dd7bb9ee200c3b90e9d36f725078f97c49551d4bed79fa43f0d849
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank