Protein

View in Explore
Genbank accession
QBX27709.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTRNNVRIAIRDSTDSHNVAFFDNKAGIKYKSANLQRFLAGSASILTLKYNSKYIDSIRSGCKLAFRYKNRDYWLNVMSFEKKCFEVELTAYSLGLELNNETRGEHKPANAMSIAEYVAYYDPEHALTIGVNEVSDKRIKLEWTGTDTILARLFSVANSFDAELDFNVELNDDYSLKRQVLNIYRKGNLGTNKLSQPVRVGKELKVINYSDNIKELKTAVRATGKDGLTIDGLNKKIYDDNKELLYYSSGMTVYAPQSRDRFPSVGKGSNDNWIVEDLGETQYETKEALWGYLYSEIQKKSLPEITYEVEGAIGAGIGDTQILIDDKHFEPALYVQARVSELEDDILTGKVTKSTFINFERKYSQIADELQKRVNELVEASIPYTIKVSSDNGTVFKNSTGTSTFKARVFKGEKEITSDVTWRWALDGNVTVAMEYLAKASTIKDTAVLTVSAYIGNNEVATTEITLTNVNDGADGPKGDKGNDGLPGKDGVGLKSTVVTYGLSTSETTQPTSWTAQVPTLTKGKYLWTKTVWTYTNNTSETGYQKTYIAKDGNDGNDGIAGKDGVGIKSTTITYASSTSGTTKPTSGWSSTIPSVSAGNYLWTKTVWTYTDNTSETGYSVAKMGETGETGNGIANTVITYGLSTSETTEPATWSSNMPVLVKGMYLWTRTVQIYTNGKSTTSYQKGYIAKDGAQGLPGTPGKDAQTQYTHIAYADNATGGGFSLTDNTKDYWGMYQDFTAANSNDPTKYKWSKWRGDQGLPGKPGTDGKTPYIHFAYADDNKGTNLSFTDKNQRYQGYYSDYTEANSSDYKKYTWVDRLANVQVGGTNLVRGTANFSSGWAWNTKVATITDIIDKFNVYHGTSTGTDTASNNYDVRFDNALTVLPDTEYTLSFWVKGSGTIYSHFFPSCVAYGINSDGKTTTSADGFITHTLKSNWERYWITWKTLPTASGLKNVLPCRQVSTAKSEVWLYGVKLEKGNVPTDWTPAPEDTQEQIDSKADSALTQEQLNALAEQDNLIKAEMEAKASIDTVDKWITAYENYVKANDADKAKSEQALKEASERILKIRYEVNDLKFVWDAIDRFMSFQNEGLVIGKKDGSAYAKFSDDRISLFSGSSEVMYISQGTLNIANGIFTKTIQIGRFRFETHPADVDMLVLRYLGG
Physico‐chemical
properties
protein length:1162 AA
molecular weight: 128896,79970 Da
isoelectric point:5,61344
aromaticity:0,11015
hydropathy:-0,53511

Domains

Domains [InterPro]
DC_0690
STR
2–719
DC_0690 DC_0002
Coil
Unmapped
360–380
Coil
QBX27709.1
1 1162
Architecture
STR
STR
STR 2-719 | STR 754-1162
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan414
[NCBI] 		2548155 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pasteurianus
[NCBI] 		197614 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27709.1 [NCBI]
Genbank nucleotide accession
MK448931.1 [NCBI]
CDS location
range 28825 -> 32313
strand +
CDS
TTGACAAGAAATAATGTACGTATTGCGATTCGTGATTCAACAGATAGCCACAATGTAGCTTTTTTTGATAATAAGGCAGGAATCAAATATAAGAGTGCTAATTTGCAACGTTTCTTAGCAGGTTCAGCAAGTATTTTAACGCTTAAATACAACTCAAAATACATTGACAGTATTCGTTCTGGGTGTAAGCTTGCCTTTCGTTATAAGAATCGTGATTATTGGCTTAATGTCATGAGTTTCGAGAAGAAATGTTTCGAAGTTGAATTGACCGCTTATTCGCTCGGTCTTGAGCTAAATAATGAAACTCGTGGCGAACATAAGCCAGCGAATGCCATGTCAATTGCTGAATATGTGGCTTATTATGACCCAGAACACGCTTTAACAATCGGCGTTAACGAAGTATCTGACAAACGAATCAAATTGGAATGGACGGGCACAGACACGATTCTGGCACGTCTTTTTTCTGTTGCTAATAGCTTTGATGCTGAACTTGATTTTAACGTAGAACTCAATGACGATTACTCACTTAAACGTCAAGTGCTGAATATCTACAGAAAAGGCAATCTTGGCACAAACAAGCTCAGTCAACCTGTAAGAGTTGGCAAAGAGCTTAAAGTCATCAACTACAGCGATAATATCAAAGAGTTAAAGACTGCTGTTCGAGCAACTGGTAAAGACGGTTTAACCATTGATGGCTTAAACAAGAAAATCTACGACGACAATAAAGAACTACTTTATTATTCGAGCGGTATGACAGTTTATGCTCCACAATCTCGTGACCGTTTCCCGTCTGTCGGCAAAGGCTCAAATGACAATTGGATTGTTGAAGATTTGGGTGAAACACAGTATGAGACCAAAGAAGCGCTTTGGGGTTATCTGTACAGCGAAATTCAAAAGAAATCTTTACCAGAAATCACATACGAAGTTGAAGGAGCTATAGGTGCCGGTATCGGCGACACGCAAATATTAATCGATGACAAGCACTTTGAACCAGCGCTTTATGTGCAAGCTCGGGTGTCTGAACTTGAAGATGACATCTTGACAGGTAAAGTGACGAAGTCAACGTTTATTAATTTTGAACGTAAGTACAGTCAGATTGCTGATGAGTTGCAAAAACGAGTTAACGAATTAGTAGAAGCTTCAATACCATACACGATTAAAGTTTCGAGTGACAATGGGACTGTTTTTAAAAATTCGACTGGAACGAGTACGTTTAAAGCTAGAGTGTTTAAAGGCGAGAAAGAAATCACTTCTGACGTCACTTGGCGCTGGGCGCTTGACGGAAACGTTACTGTTGCCATGGAATACCTTGCTAAAGCTAGCACTATCAAAGATACCGCTGTTTTGACCGTATCTGCTTATATTGGCAACAACGAAGTAGCAACGACTGAAATTACGCTAACTAATGTCAACGATGGCGCAGACGGTCCTAAAGGCGATAAAGGTAATGACGGTTTGCCCGGCAAAGATGGCGTAGGTTTAAAATCTACTGTCGTCACTTACGGATTAAGCACGTCTGAAACCACACAGCCAACGAGCTGGACGGCCCAAGTGCCAACTTTGACGAAAGGCAAATACTTGTGGACTAAGACGGTATGGACGTACACCAACAACACATCTGAAACTGGCTATCAGAAAACCTACATTGCCAAAGACGGTAACGATGGTAACGACGGTATTGCTGGTAAGGATGGTGTGGGTATCAAGTCAACGACTATCACTTACGCAAGTTCAACATCTGGCACAACTAAGCCGACAAGTGGCTGGTCTAGCACTATTCCAAGTGTTTCAGCTGGTAACTATCTGTGGACTAAGACTGTATGGACGTACACGGACAATACTAGTGAGACTGGCTATTCTGTTGCAAAAATGGGTGAGACTGGCGAGACTGGAAACGGCATTGCTAATACTGTTATCACGTATGGTCTTAGCACATCTGAAACCACCGAACCAGCAACGTGGTCTAGTAACATGCCTGTTTTGGTTAAAGGTATGTATCTGTGGACGCGGACTGTACAAATATACACTAACGGCAAATCTACTACGAGCTATCAGAAAGGTTATATCGCCAAAGACGGTGCGCAAGGTTTACCGGGTACACCAGGGAAAGATGCTCAAACGCAGTACACGCATATTGCTTACGCTGATAACGCAACTGGTGGTGGTTTTAGTCTGACGGATAACACTAAAGATTACTGGGGCATGTACCAAGATTTTACTGCTGCCAACAGCAACGACCCCACGAAATACAAGTGGAGCAAGTGGAGAGGCGACCAAGGCTTGCCCGGAAAACCGGGAACTGACGGTAAAACACCTTACATTCACTTTGCTTATGCTGATGACAACAAAGGTACTAATCTTAGTTTTACCGATAAAAACCAGCGGTATCAAGGCTACTATAGCGACTACACAGAAGCTAATAGTAGCGACTACAAGAAATATACGTGGGTTGATAGGTTGGCGAATGTGCAGGTTGGTGGGACGAATTTAGTTAGAGGTACTGCTAACTTTTCTTCGGGTTGGGCTTGGAATACTAAGGTTGCGACAATTACGGACATTATCGATAAGTTCAACGTATATCATGGTACGTCTACCGGTACAGATACAGCTTCGAATAACTATGATGTTCGTTTTGACAACGCTTTAACTGTTCTCCCTGATACTGAATACACTTTATCGTTTTGGGTAAAAGGTAGTGGAACTATATACAGTCATTTCTTCCCAAGCTGTGTAGCATACGGTATTAATAGCGATGGTAAAACTACTACATCAGCCGATGGATTTATCACTCATACGCTGAAATCGAATTGGGAACGATATTGGATAACTTGGAAGACACTACCCACCGCAAGCGGACTCAAAAACGTGTTGCCGTGCCGTCAAGTTTCTACTGCTAAATCCGAAGTGTGGCTTTACGGTGTTAAGCTCGAAAAAGGCAACGTACCAACAGACTGGACACCTGCTCCCGAAGACACCCAAGAGCAAATCGACAGCAAAGCCGACAGCGCACTCACGCAAGAGCAACTGAATGCGTTGGCAGAGCAGGATAATCTTATCAAAGCTGAAATGGAAGCAAAAGCTAGTATTGATACCGTTGATAAATGGATAACAGCTTACGAGAACTATGTCAAAGCTAATGATGCAGACAAAGCTAAATCAGAGCAAGCTTTAAAAGAAGCGTCAGAGCGAATCTTGAAAATCAGATACGAAGTTAACGACTTAAAATTCGTTTGGGACGCAATCGATAGATTCATGAGTTTTCAAAACGAAGGTTTGGTCATCGGTAAGAAAGATGGTTCAGCTTACGCTAAATTTAGCGATGACAGAATCAGCTTATTCTCAGGTAGCAGTGAGGTAATGTATATTTCGCAAGGTACGTTAAATATTGCTAACGGTATTTTTACGAAGACGATTCAAATTGGGCGTTTTCGTTTTGAAACACACCCAGCTGATGTAGACATGCTGGTATTAAGGTATTTAGGAGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
55f2733a979c6dfeaf1ce0b17c05c4cfd18e5374fa2780ab6ad49d4fdafb96a6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank