Protein

View in Explore
Genbank accession
XWX36481.1 [GenBank]
Protein name
minor tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MELEKVGKLDLNEEPYLQPISNRGIGFYNLDKNTAKFQFVVQKDNKPLLISDKNVKGYAFFKAANGTEEKRPSTSGVLDVEFIDPMKGLIGVTVPQWFLKNVVDSEVLGEIYLSLNDVNNVGKDDTVVLGTFKFTVRDSLINQIESDIKVSYIRMFDELRSELEKKVQQLKQDIGDTQTLIESIKQTAEEYLIKINKAQADAIVSITDALISSNQSIDLEREEALRQIDAKRDAIKTDYDLASDTFQKTYDSNVDAFNSNVNQANTTIDEKLQIFNETLERDGFTTPEYVESKFAEKNWQKFKLTNDDGKSHKLVNAELDNPDFLSNLKPGFYYCPSPTGSPLNKSGFLEVYEYANNIVKHVLFRPFNLNRIFMKNGYMTWSDWEEITNDQSDTGWLDLQLVNSASPHNDLVSKGGFTSAYRTITQNGVTKKMLRINATTIKHGQTIALLPKEFVKNLMFFSISAPRNKNSGRISLNTSGTVNFDATVDPSAWTDTDYIYGQYEWTE
Physico‐chemical
properties
protein length:507 AA
molecular weight: 57561,89000 Da
isoelectric point:4,96821
aromaticity:0,10256
hydropathy:-0,50414

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
8–143
G3DSA:2.60.40.3350 Coil cd19958
IPR018913
ATT
18–164
IPR018913
DC_0196
STR
20–507
DC_0196
XWX36481.1
1 507
Architecture
ATT
STR
ATT 8-164 | STR 165-507
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_93
[NCBI] 		2815644 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX36481.1 [NCBI]
Genbank nucleotide accession
MZ417353 [NCBI]
CDS location
range 23329 -> 24852
strand -
CDS
ATGGAATTAGAAAAAGTAGGTAAACTTGATTTAAACGAAGAACCATATTTACAACCGATATCTAATAGAGGTATCGGTTTTTATAATCTCGATAAAAACACTGCTAAATTTCAATTTGTAGTACAAAAAGACAACAAACCTTTGTTAATCAGCGATAAGAATGTTAAAGGTTATGCTTTCTTTAAAGCTGCGAACGGAACAGAAGAAAAACGACCTAGTACATCAGGTGTATTAGACGTAGAATTCATTGATCCAATGAAAGGATTAATAGGTGTTACGGTACCTCAATGGTTTCTGAAAAACGTTGTCGATTCTGAAGTGTTGGGTGAAATTTACTTATCACTCAACGATGTAAACAACGTAGGAAAAGACGACACTGTTGTGTTAGGCACTTTTAAATTCACGGTACGCGACAGTCTTATCAATCAAATCGAAAGTGATATCAAAGTATCTTATATTCGAATGTTTGATGAATTGCGTTCGGAATTAGAAAAGAAAGTGCAACAACTTAAGCAAGATATAGGCGATACACAAACGTTGATTGAATCTATTAAGCAAACAGCTGAAGAATACCTCATTAAAATAAACAAGGCTCAAGCAGACGCTATTGTTTCAATTACAGACGCGTTAATATCGTCTAACCAAAGCATTGACCTAGAGAGAGAAGAAGCTTTAAGACAAATTGATGCTAAACGTGACGCTATCAAAACGGATTATGATTTAGCTTCAGATACATTCCAAAAAACTTATGATAGCAATGTGGACGCTTTTAATTCAAATGTTAATCAAGCTAACACAACAATTGATGAAAAGCTACAAATATTTAATGAAACCCTTGAAAGAGATGGCTTTACTACTCCTGAATATGTAGAAAGTAAGTTTGCAGAAAAAAATTGGCAAAAATTTAAATTAACAAATGATGATGGTAAATCACATAAATTAGTTAATGCCGAATTAGATAATCCGGATTTTCTAAGTAATTTAAAGCCAGGATTCTATTATTGCCCTTCACCTACAGGTTCGCCATTAAACAAAAGTGGTTTTTTAGAAGTGTATGAATATGCCAATAATATTGTTAAACATGTTCTTTTCAGACCTTTTAATTTAAATAGAATTTTTATGAAAAATGGTTACATGACTTGGTCAGATTGGGAAGAAATCACAAATGATCAATCTGATACTGGTTGGTTGGATTTACAACTAGTGAACAGTGCATCACCTCATAACGATTTAGTTTCTAAAGGTGGATTTACTAGTGCGTACAGAACAATCACACAGAATGGAGTTACTAAGAAAATGTTACGCATTAATGCTACAACTATCAAACATGGACAGACTATTGCACTTTTACCTAAAGAATTCGTCAAAAACTTAATGTTTTTCTCAATAAGTGCACCTAGAAACAAAAACAGCGGACGTATTTCGTTGAACACATCAGGAACAGTGAATTTTGACGCTACTGTAGATCCATCAGCGTGGACTGATACAGATTATATTTACGGTCAATATGAATGGACGGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd847a31b07882b0c214f5ff4838871e51f1593d813ffddd89678b887a097981
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8501
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank