Protein
View in Explore- Genbank accession
- ABS83726.1 [GenBank]
- Protein name
- virion structural protein
- RBP type
-
TSP
- Protein sequence
-
MVQIKQNADGSFSKGYSNFETTIIKSLQKEITQRQEADLSLQGITNGLNERLKELEAGSFSLADLQQLITQNKLTIEDHERRMVKLENISLIESYSKSEMKKYMVPWRVEVIPHAFDIPTNKMFDTASLDVKRSGIIHYPNGDINEPNDMHVPENSMMRFTIWAYASSPRKAVLNINYADRCVVIADEVVVATFTDRGGNFGQVPKGVQVPMKQGWTRIQLLIANETQSGGLVVKSDLYDKADYLTSLDYFDGMITNKHIKPGSITGENLSPNMDLVVHTIHATATDVPGVIIGNPEEQGILQIADGTISKSKDEPFIFSHGIRVNGAIHVTQLLIDEDFIRAGDGMIVKTLKDEYGYTKMYEIINDLRMHTGGGVSVDGNGQDGYIVTNTMKLNVDPEGGLAISGNAVDGYWLSNDMQLHSDGGIWVEGNARKGYRIKNNMGLRSNVDFLRIFGTAWEGYSISLDEDAFYNRIKEIIKKESHVKDIISDIDFIKITDNGDGVHRLAIPDYNKMIPWIQKGQSGMLHASPMPNSIGPGMRFNAGNPMFAQSQDTNYSVLGFWGGEVPANTADVICISSQGGWTNSWSAVDLKFVISIEDPGVSGGVWRKEFYRTITNQLDGGDSQWNNNEMIHVIPIPVRDYWRHWDCTFYMRKSSGSGWVNARSREAWTDHSTHAGSVHTAAMRTQESYGGR
- Physico‐chemical
properties -
protein length: 693 AA molecular weight: 77319,26450 Da isoelectric point: 5,54626 aromaticity: 0,08802 hydropathy: -0,38528
Domains
Domains [InterPro]
DC_0694
STR
5–690
STR
5–690
Coil
Unmapped
62–82
Unmapped
62–82
1
693
Architecture
STR 5-690 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
693
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 98 | 98 | 0,9886 |
| Central domain | 99 | 517 | 420 | 0,6578 |
| C-terminal | 518 | 693 | 175 | 0,9593 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-98
1-98
Central
99-517
99-517
C-terminal
518-693
518-693
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage 0305phi8-36 [NCBI] |
458639 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus thuringiensis [NCBI] |
1428 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
ABS83726.1
[NCBI]
Genbank nucleotide accession
EF583821
[NCBI]
CDS location
range 95686 -> 97767
strand +
strand +
CDS
ATGGTGCAAATTAAACAGAATGCTGATGGTAGTTTCTCCAAAGGGTATAGTAACTTTGAGACAACGATCATCAAGAGCCTTCAAAAAGAAATTACGCAACGACAAGAAGCTGACCTTTCCCTTCAAGGAATTACGAATGGTTTGAATGAACGCCTGAAAGAACTTGAAGCAGGAAGCTTTAGTTTAGCTGACCTGCAACAACTTATCACGCAGAACAAACTTACCATCGAAGACCATGAAAGACGTATGGTGAAGCTAGAGAACATCTCTCTTATCGAGTCTTATAGTAAGAGCGAGATGAAGAAGTACATGGTTCCGTGGCGAGTAGAAGTCATTCCGCACGCCTTTGACATTCCAACAAACAAAATGTTTGATACAGCTTCACTGGATGTAAAGCGTAGCGGGATTATACATTATCCGAACGGTGACATCAATGAACCAAACGATATGCACGTTCCGGAAAACTCTATGATGCGTTTTACCATTTGGGCATATGCATCATCACCACGTAAAGCTGTACTGAACATTAACTACGCTGACCGTTGCGTTGTCATTGCTGATGAAGTAGTAGTCGCTACGTTCACAGATAGAGGCGGTAACTTCGGTCAAGTACCAAAAGGTGTGCAAGTTCCAATGAAGCAAGGATGGACTCGTATCCAGCTTCTTATTGCGAACGAAACACAGTCCGGTGGGTTAGTGGTGAAATCAGACCTGTATGATAAGGCGGATTACTTAACGAGCCTTGATTACTTCGACGGTATGATTACGAACAAACATATCAAGCCGGGTTCGATTACAGGAGAGAACTTATCACCGAACATGGATTTAGTTGTACATACGATTCATGCAACGGCGACAGATGTTCCGGGTGTTATCATTGGTAACCCTGAGGAACAAGGTATCCTGCAAATCGCTGATGGTACAATCTCAAAATCCAAAGACGAGCCGTTTATCTTTAGTCATGGTATCCGTGTAAACGGAGCGATCCACGTTACGCAGTTACTTATTGACGAAGACTTTATCCGTGCCGGCGATGGTATGATTGTCAAAACACTAAAGGATGAATACGGATATACAAAGATGTATGAAATCATCAATGACCTTCGTATGCATACTGGTGGTGGTGTATCAGTCGATGGTAACGGGCAAGACGGTTACATCGTAACAAATACGATGAAGCTGAACGTTGACCCTGAGGGTGGTCTTGCAATCAGTGGTAATGCAGTAGATGGTTACTGGTTATCAAATGATATGCAGCTACATTCTGACGGCGGTATTTGGGTAGAAGGAAATGCCCGCAAAGGATACCGCATTAAGAATAACATGGGGTTACGTTCTAACGTAGACTTCCTTCGTATTTTCGGAACAGCGTGGGAAGGATATAGCATTTCACTGGATGAGGATGCATTCTACAATCGTATCAAAGAAATCATCAAGAAAGAATCGCACGTAAAGGATATCATTTCTGACATTGACTTTATTAAGATTACTGACAATGGTGACGGTGTACATCGACTTGCAATCCCTGATTACAATAAGATGATTCCGTGGATTCAGAAAGGACAGTCCGGAATGCTACATGCATCTCCAATGCCGAACTCTATCGGGCCGGGTATGAGATTCAATGCAGGTAACCCAATGTTCGCACAGTCTCAAGATACGAACTACTCTGTACTTGGTTTTTGGGGCGGTGAAGTTCCAGCAAACACGGCTGATGTCATCTGCATTAGTTCACAAGGTGGTTGGACAAATTCATGGTCAGCAGTAGACTTGAAGTTCGTTATCTCGATTGAAGACCCCGGCGTATCTGGTGGCGTATGGCGTAAAGAGTTCTATCGCACCATTACGAATCAGTTAGACGGCGGAGATTCACAATGGAACAATAACGAAATGATTCATGTCATTCCGATTCCAGTTCGCGACTATTGGAGACACTGGGACTGCACATTCTATATGCGTAAGTCTAGCGGAAGCGGTTGGGTAAATGCTCGTAGCCGTGAAGCATGGACGGATCACTCTACTCATGCTGGTAGCGTGCATACAGCAGCAATGCGTACGCAAGAAAGCTATGGAGGTCGATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
3993f8798140a48b1a5d92eb368a27d10b7ed980b850cd15ed6f9d70c27a1790
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50