Protein

View in Explore
Genbank accession
YP_008061253.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MIYRTLKVDFARAVTRTGSHDRVEVAIRPLDTTHSPIDGATYIDGPAAQTMVLSEAKNTVEFRLVPSYAEGLTEPVLYRASWRVGLTGRLETVEFSMPNMDVTLAQLQDMGEIIGELPYLKEGDLGVPGRVARLNDQGKVIDAFGNIVDGSGSAVELGQRLDLEIANRQSADAALNTSLSNEISNRVTSVTTAFQNLLSAQIGSVVSTANADRASMGSGLAIANGRIISIEATLPKKADLVDGRLPLSQAPLVQLGQVHAATNQAAMLGLTGVAVGDVCLRPDGSWMLTAQPPSLLKNWTQITSPSDTVMSVNGKIGVVTLTAADVGAWSNATLLPQNAIQSLPTDLATIRQNVAAHTVTLSSAVLVNETGMIDDAKLSGSVAFLNSQNQVVNKAGQVVIVSGNVSSVNGKSGAVVLKASDVGAVGVGSQISMSYVTGLVLALQEKVGINDASVTNARTPLSHAASHSFGGQDPLTPAAIGALAANAQIPQSQITGLLTDMALKASQSDLQITNNQVQKNTIDIASLIAGGGGSGGGGIAGNVVSWANGSSTNPYTASIMSPFGWSSANGYYYNAEGAAAGEAVWPYITPNGRLELRRVNHSAPVDPAPATATDIAAVQGQIDTVNGKIPGLATKTALDSTNSNVAGISTAITLLAPLASPTFTGTASTPALRVTGGTLAAGRVLTSDASGNATWQAVPVVSVAGKTGAVVLAQSDITGLVSDLGAKADRANPTFTGTTTISALRVTGGSLGAGKTLISDASGNATWQVPPSAPVSSVSGHTGDVTLVPSDVVGLSTLMNAKADLVGGVIRSDQIPALAMHTVVTAASQADMLALTTSQVQRGDMCIITGGAERGNYILTADSPAILSNWVPLVLPAQAVSSVNGKTGVAVLSAADVGAIATGAMIPQSQITGLLTDLGGKADSSALANYLSKTEAQAQSTTKNTVKYAATSSVTSLSGTSTLIDSRTLVAGDRVLLPVQSSSKDNGIWVVQSGAWTRPADMPTSSIVVTGTQVIVTDGATLANTVWQMNGTTSTNVGTTPQTWTKSLVAGPPVAYTSGPGIQIVGNTVSSNYGDGLKVVGQQLTVDPDVVARKKVIPITQTTKTVTLTHNLNTQFVWVSIIDNQTSSIVLAGATVSTANAVSVEFEVAPTSTQYTAVVFG
Physico‐chemical
properties
protein length:1161 AA
molecular weight: 118492,23870 Da
isoelectric point:5,30958
aromaticity:0,03876
hydropathy:0,15280

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage E3
[NCBI] 		1007869 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prescottella equi
[NCBI] 		43767 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008061253.1 [NCBI]
Genbank nucleotide accession
NC_021347 [NCBI]
CDS location
range 132849 -> 136334
strand +
CDS
ATGATCTATCGCACCCTCAAGGTCGACTTCGCCCGCGCCGTGACCCGCACCGGTTCTCACGATCGGGTGGAGGTGGCCATCCGCCCCCTCGACACCACGCACAGCCCGATCGACGGGGCGACGTACATCGATGGCCCGGCGGCTCAGACCATGGTGCTCTCGGAGGCCAAGAACACCGTCGAGTTCCGGCTGGTGCCGTCGTACGCGGAGGGCCTGACCGAGCCGGTGCTCTACCGAGCCTCGTGGCGTGTCGGTCTGACCGGTCGACTCGAGACCGTCGAGTTCTCCATGCCGAACATGGACGTCACGCTGGCGCAGCTGCAGGACATGGGCGAGATCATCGGCGAGCTGCCCTACCTGAAGGAGGGCGACCTCGGCGTCCCGGGTCGCGTCGCCCGACTCAACGACCAGGGCAAGGTCATCGACGCGTTCGGCAACATCGTCGACGGCTCCGGCAGCGCGGTCGAGCTCGGCCAGCGCCTCGACCTCGAGATCGCGAACCGGCAGAGTGCCGACGCCGCCCTGAACACGTCGCTGTCGAACGAGATCTCCAACCGGGTCACCTCGGTCACCACCGCATTCCAGAACCTGCTCAGCGCGCAGATCGGCTCGGTCGTCTCGACCGCCAACGCCGACCGCGCGAGCATGGGCTCCGGCCTGGCCATCGCCAACGGCAGGATCATCTCCATCGAGGCGACGCTGCCGAAGAAGGCCGACCTCGTCGACGGCCGCCTGCCGCTGTCGCAGGCCCCGCTCGTCCAGCTCGGCCAGGTGCATGCGGCCACGAACCAGGCAGCCATGCTCGGCCTGACCGGCGTCGCGGTCGGCGACGTCTGCCTGCGGCCGGACGGCTCGTGGATGCTCACCGCGCAGCCGCCGTCGTTGCTGAAGAACTGGACCCAGATCACCTCGCCATCCGACACCGTGATGTCGGTCAACGGCAAGATCGGCGTGGTCACCCTGACGGCCGCCGACGTCGGCGCGTGGTCGAACGCGACCCTGCTGCCGCAGAACGCCATTCAGTCGCTGCCGACGGACCTCGCGACGATCCGACAGAACGTCGCTGCGCACACGGTCACCCTCTCGAGCGCGGTGCTCGTCAATGAGACCGGCATGATCGACGACGCCAAGCTGTCGGGCTCGGTCGCCTTCCTCAACAGCCAGAACCAGGTCGTGAACAAGGCCGGGCAGGTCGTCATCGTCTCCGGCAACGTCTCGTCGGTGAACGGCAAGTCCGGCGCGGTGGTGCTCAAGGCCTCCGACGTCGGCGCGGTGGGCGTCGGCTCGCAGATCTCGATGTCGTACGTCACCGGCCTGGTGCTCGCGCTGCAGGAGAAGGTCGGAATCAACGACGCGTCGGTCACCAACGCGCGCACGCCGCTGTCGCACGCCGCGAGCCACAGCTTCGGCGGCCAGGATCCGCTCACCCCGGCCGCCATCGGCGCGCTCGCGGCCAACGCGCAGATCCCGCAGAGCCAGATCACCGGCCTGCTCACGGACATGGCGCTGAAGGCGAGCCAGTCCGACCTGCAGATCACCAACAACCAGGTCCAGAAGAACACGATCGACATCGCCAGCCTCATCGCGGGCGGCGGCGGCAGTGGCGGCGGCGGGATCGCAGGCAACGTCGTCTCGTGGGCCAACGGCTCGTCGACGAACCCGTACACCGCGAGCATCATGTCTCCGTTCGGCTGGAGCTCGGCGAACGGCTACTACTACAACGCCGAGGGCGCGGCGGCGGGCGAGGCTGTCTGGCCGTACATCACCCCGAACGGTCGGCTCGAGCTGCGCAGGGTCAACCACAGCGCGCCGGTGGATCCGGCCCCGGCGACGGCCACCGACATCGCGGCCGTCCAGGGGCAGATCGACACCGTCAACGGCAAGATCCCGGGCCTGGCGACCAAGACGGCGCTGGACAGCACCAACTCGAACGTCGCGGGGATCTCGACGGCCATCACCCTGCTGGCACCGCTGGCCAGCCCGACGTTCACCGGCACCGCCTCGACGCCCGCCCTGCGTGTCACCGGCGGCACGCTGGCGGCTGGCCGGGTGCTCACCTCGGACGCGTCCGGCAACGCGACGTGGCAGGCCGTCCCGGTCGTCTCGGTGGCGGGCAAGACCGGCGCGGTGGTGCTGGCTCAGTCCGACATCACCGGGCTCGTCTCGGACCTCGGCGCGAAGGCCGACAGGGCCAACCCGACGTTCACTGGCACCACGACGATCTCGGCCCTGCGCGTCACTGGCGGCTCGCTGGGCGCGGGCAAGACCCTGATCTCCGACGCCTCGGGCAACGCGACGTGGCAGGTGCCGCCGAGCGCCCCCGTGTCCTCGGTGTCCGGGCACACCGGAGACGTCACCCTGGTGCCGTCGGACGTCGTCGGCCTGTCGACGCTGATGAACGCGAAGGCCGATCTCGTCGGCGGCGTGATCCGCTCCGACCAGATCCCGGCCCTGGCTATGCACACCGTTGTCACGGCCGCCTCTCAGGCTGACATGCTCGCGCTGACCACCTCCCAGGTGCAGCGCGGCGATATGTGCATCATCACCGGCGGCGCTGAGCGCGGCAACTACATCCTCACGGCGGACAGCCCGGCGATCCTGTCGAACTGGGTGCCGCTGGTGCTGCCCGCGCAGGCCGTCTCCTCGGTCAACGGCAAGACCGGCGTCGCGGTCCTGTCGGCCGCCGACGTCGGAGCCATCGCCACCGGCGCGATGATCCCGCAGTCCCAGATCACCGGCCTGCTCACGGATCTCGGCGGGAAGGCTGACAGCTCGGCGCTGGCCAACTACCTGTCCAAGACCGAGGCGCAGGCGCAGTCGACGACGAAGAACACCGTGAAGTACGCGGCCACCAGCAGCGTGACGAGCCTGTCGGGCACCTCGACGCTGATCGACAGCCGGACCCTGGTCGCCGGAGACCGCGTGCTGCTGCCGGTCCAGTCCTCGAGCAAGGACAACGGCATCTGGGTCGTCCAGTCCGGCGCGTGGACCCGCCCGGCCGACATGCCGACGAGCAGCATCGTCGTCACCGGCACGCAGGTGATCGTCACCGACGGCGCGACGCTGGCCAACACGGTCTGGCAGATGAACGGCACGACGAGCACCAACGTCGGCACCACGCCGCAGACGTGGACCAAGTCGCTCGTCGCCGGTCCGCCGGTCGCGTACACCAGCGGCCCGGGCATCCAGATCGTCGGCAACACGGTGTCGTCGAACTACGGCGACGGCCTGAAGGTGGTCGGCCAGCAGCTGACCGTCGACCCGGATGTGGTCGCGCGCAAGAAGGTCATCCCGATCACCCAGACCACGAAGACGGTCACGCTGACGCATAACCTCAACACGCAGTTCGTCTGGGTCTCGATCATCGACAACCAGACCAGCAGCATCGTGCTGGCGGGCGCTACCGTCTCCACGGCGAACGCGGTCTCCGTCGAGTTCGAGGTCGCTCCGACGTCCACCCAGTACACCGCCGTCGTCTTCGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cc37a453a1160531d852bee63d7c278cfb6dea9e0703f873185fcac534926a4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50