Protein

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Genbank accession
WJJ55201.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MSDYLINHAVTNVWCTPNQDLQVTYRPQRISNPRGVRERMSHMWGSVFMPTATDVYHVYQIGQYQPFLIGLSPVRGKWRSLADLMNEESLFSDLYTVDGIHLSRFHTFVMVTPEQNVLVAVRDQAKIVNLKTAVLYLRLYSNSFFNSPRSDDYAHGIVCRGARVMTSAQALNVQRDYLEMKARPRGYTWLYVNGVYRDDYRPADFQAGDYVEFVHDSSVKAVKEFNIRDLPTFDSIKDSKRKYLLHYAGNQVGGVGIDYRDDIDLYLIKPAANNRYTGVYYHKNNDDAFRQVTHRDYSMVVDYVVAHQQAMLPRGWTNINDLKVQMFIRHGGYSRPLVFEHHRIQELYKLPDANIRQALLGLDSVVDVWRADQLENSEYIEIMDARKRQITIERVKEAYGYNAIAKLIGDTPSKVQNMSGRRAVSLPYGTQVDSTAYEIDSAGKLIASYIHTSGVEYTPFNANCAMVEMIIGRGGQKLDMVFNTQDVPVNPKYSYRFYIAPIAHGELRNDQWADVTGDNTKYEIINGKVHWLVDLQYNAVCVKSDAFFLNYELNLPADNGLLRFTVTATNTWQGGQALSNPLYIPPGRVDVWINDEVLVEGLDYLVKWPQIVVTNKQFLRDGQTQKIRVRGTGFCNADLSRVPPKEVGFVRWGKLSRNTRYDLRDDRVVRLVVNGRTFHRDDVYFTEGDPSLWMNNVPNGAPYILEDLVVPLRQVISDDTYDFRAKSLEVDQKVSDYLTMKMPEPIPANPDPILERYAVYSPFAASVMYDLLTERLSTEKFRGQYSDQEVRTFLSSYEWLLDFEPTRTQLDLSHVAVHPHDRTTVIELDAYQYMLLNRAIKIFLEDKVDITRFVRIKASFI
Physico‐chemical
properties
protein length:861 AA
molecular weight: 99310,46230 Da
isoelectric point:6,42129
aromaticity:0,11614
hydropathy:-0,36423

Domains

Domains [InterPro]
IPR055617
STR
2–858
IPR055617
WJJ55201.1
1 861
Architecture
STR
STR 2-858 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ55201.1
1 861
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9892
Central domain 237 850 615 0,0401
C-terminal 851 861 10 0,1054
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-850
C-terminal
851-861

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage RTH11
[NCBI] 		3044021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas sp.
[NCBI] 		29446 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ55201.1 [NCBI]
Genbank nucleotide accession
OQ790161 [NCBI]
CDS location
range 275058 -> 277643
strand +
CDS
ATGAGTGATTACCTGATCAATCATGCGGTCACCAATGTCTGGTGCACGCCCAATCAGGATCTGCAGGTCACTTATCGTCCCCAGCGCATCTCCAACCCGCGCGGTGTTCGTGAACGGATGTCCCACATGTGGGGCTCCGTTTTCATGCCAACGGCAACGGATGTGTATCACGTCTATCAGATCGGTCAGTACCAGCCCTTCCTCATCGGACTCAGTCCGGTGCGTGGTAAGTGGCGTTCGCTGGCAGATCTGATGAACGAGGAATCGCTCTTCTCGGACCTGTACACCGTCGATGGTATTCACCTGAGCCGGTTCCACACCTTCGTGATGGTGACCCCCGAACAGAACGTGCTGGTGGCGGTGCGTGATCAAGCCAAGATCGTCAACCTCAAGACGGCTGTGCTTTACCTGCGCCTGTATTCCAACTCCTTCTTCAACTCGCCCCGTTCGGACGACTACGCCCATGGCATCGTCTGTCGCGGTGCCCGTGTGATGACCTCGGCCCAAGCGCTGAACGTCCAACGCGATTACTTGGAGATGAAGGCCCGTCCCCGTGGTTACACCTGGCTCTACGTCAACGGTGTGTATCGCGACGACTACCGGCCTGCCGATTTCCAAGCCGGCGATTACGTCGAGTTCGTCCATGACAGCTCGGTCAAAGCAGTCAAGGAATTCAACATCCGCGACCTGCCGACTTTTGATAGCATCAAGGACAGCAAGCGTAAGTATCTGCTCCATTATGCCGGCAACCAAGTCGGCGGTGTGGGCATCGATTACCGCGACGACATCGACCTGTACCTGATCAAGCCTGCGGCCAACAACCGCTACACCGGTGTGTACTACCACAAGAACAACGACGACGCTTTCCGACAGGTCACTCACCGTGACTACTCGATGGTGGTTGATTACGTGGTGGCCCATCAGCAAGCCATGCTCCCGCGGGGCTGGACGAACATCAACGACCTCAAGGTGCAGATGTTCATCCGTCACGGTGGCTACTCCCGACCGCTGGTGTTTGAACACCATCGTATCCAGGAACTGTACAAGCTGCCCGACGCGAATATCCGTCAGGCGCTGTTGGGTCTGGACTCGGTCGTGGATGTCTGGCGCGCTGATCAACTGGAGAACTCGGAGTACATCGAGATCATGGACGCACGCAAGCGTCAGATCACGATCGAGCGAGTCAAGGAAGCCTACGGTTACAACGCCATTGCCAAGCTCATCGGCGACACCCCGAGCAAGGTGCAGAACATGTCCGGTCGTCGGGCCGTCTCCTTGCCGTATGGCACGCAGGTGGATTCCACGGCCTATGAGATCGACAGTGCTGGTAAGCTGATCGCCTCGTACATCCATACCTCCGGTGTGGAGTACACCCCCTTCAATGCCAACTGCGCAATGGTCGAGATGATCATCGGTCGTGGCGGGCAGAAGTTGGACATGGTCTTCAACACCCAGGACGTGCCGGTCAATCCGAAGTACTCCTACCGCTTCTACATCGCTCCGATCGCCCATGGCGAACTGCGCAATGATCAGTGGGCCGATGTCACCGGTGACAACACCAAGTACGAGATCATCAACGGCAAGGTGCATTGGTTGGTGGACCTGCAATACAACGCAGTGTGCGTCAAGTCCGATGCGTTCTTCTTGAACTACGAGCTGAACCTGCCGGCCGACAACGGTCTGCTGCGGTTCACGGTCACAGCGACCAACACGTGGCAAGGTGGGCAGGCCCTGTCCAATCCGTTGTATATCCCGCCCGGTCGTGTGGATGTGTGGATCAACGATGAGGTGCTGGTCGAAGGACTGGACTACCTTGTGAAGTGGCCGCAGATCGTGGTGACCAACAAGCAGTTCCTGCGTGATGGCCAGACCCAGAAGATCCGTGTGCGTGGCACCGGCTTCTGCAACGCAGACCTGTCCCGTGTTCCGCCCAAGGAAGTCGGGTTCGTGCGCTGGGGTAAGCTCTCGCGCAACACCCGTTACGACCTGCGCGATGATCGCGTGGTGCGTCTGGTGGTCAATGGTCGCACGTTCCATCGTGACGATGTGTACTTCACCGAAGGTGATCCGTCCTTGTGGATGAACAACGTACCCAACGGTGCGCCGTACATCCTGGAGGACTTGGTCGTGCCGTTGCGTCAGGTGATCAGTGATGACACCTACGACTTCCGCGCCAAGTCGCTGGAGGTGGATCAGAAGGTCTCTGACTACCTGACCATGAAGATGCCCGAGCCGATTCCGGCCAACCCGGATCCGATCTTGGAGCGCTACGCGGTCTACAGTCCCTTTGCAGCTTCGGTCATGTACGACCTGCTCACCGAGCGGTTGTCCACCGAGAAGTTCCGGGGCCAGTACAGCGATCAGGAAGTGCGCACGTTCTTGAGCAGTTACGAATGGTTGCTCGACTTCGAGCCGACGCGGACTCAGCTGGATCTGTCCCATGTGGCCGTGCACCCGCACGATCGCACCACGGTGATCGAACTGGACGCCTACCAGTACATGCTGCTCAACCGCGCCATCAAGATCTTCCTGGAAGACAAGGTGGACATCACGCGCTTCGTGCGTATCAAAGCTTCCTTCATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
79705e699253b006d737c9a739fcc32bc99f44d17f582e465594d281b8bd77ab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2824
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50