Protein

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Genbank accession
QIG63033.1 [GenBank]
Protein name
DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFARILDYGNKAPLPSSIISTYVGSQSFYALSTDKVLYSTGDNALGQLGLGDTETRNEWVQCDTGVDEVYTGMASYAVLIRKGNSIYLSGKNTLYTGNDNGTYTKFTLIIPDISTIYEYADCYIKDIQVNDNSMMVLVGRISDSNYGALYSQGKGVTLGQGNNTPAHYALALCSTAPKTIMSISASAFNCFITTVNSNILAVGNNSFKQVANTSTSTYNVYTQATLTSQNIHCGDYVVIAIRTDGIYIRGNTPNGTISDFQRILSFSTDLVTARNMVCSYNTRGVVVVIPPEVQGLQSGLYVLGQQFDVNGVVGVVNSFRFMYSETFDKVQGGFNHYVYKNSTGFYISGANLQFLPGKDDTAALRPMILPTN
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40641,29220 Da
isoelectric point:5,60799
aromaticity:0,10963
hydropathy:-0,02380

Domains

Domains [InterPro]
DC_0433
ATT
1–160
DC_0433
IPR009091
STR
9–273
IPR009091
IPR009091
STR
15–266
IPR009091
QIG63033.1
1 374
Architecture
ATT
STR
ATT 1-160 | STR 161-273 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG63033.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,2467
Central domain 103 301 200 0,1425
C-terminal 302 374 72 0,6684
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-301
C-terminal
302-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE_PL
[NCBI] 		2712932 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG63033.1 [NCBI]
Genbank nucleotide accession
MT001829 [NCBI]
CDS location
range 286948 -> 288072
strand +
CDS
ATGATACCGTTTGCTAGGATATTGGATTACGGGAATAAAGCCCCCTTACCATCCTCAATAATTTCGACATATGTTGGTTCACAATCGTTCTATGCATTAAGTACTGATAAAGTTCTTTATAGTACAGGGGATAATGCATTGGGGCAATTGGGGTTAGGTGATACAGAGACCCGTAATGAATGGGTTCAGTGTGATACAGGGGTTGATGAAGTTTACACTGGTATGGCATCATATGCGGTATTAATAAGAAAAGGCAATTCGATATATTTAAGTGGTAAGAATACCTTATATACAGGAAATGATAATGGGACGTATACTAAATTCACATTAATAATCCCGGATATTAGTACTATATATGAATACGCTGATTGCTACATAAAGGACATACAAGTGAATGATAATAGTATGATGGTATTAGTTGGAAGGATATCTGATTCTAATTATGGTGCTTTATACTCTCAGGGAAAAGGGGTGACATTAGGGCAAGGAAATAATACACCTGCACACTATGCTTTAGCGTTATGTAGTACTGCTCCGAAAACGATTATGTCTATAAGTGCGAGTGCATTTAATTGTTTTATTACTACTGTGAATTCTAACATATTAGCTGTTGGTAATAATTCATTTAAGCAGGTTGCGAATACCTCGACGAGTACTTATAATGTATATACTCAAGCCACGTTAACTTCACAAAATATCCATTGTGGAGATTATGTTGTAATTGCGATAAGGACGGATGGTATATATATACGAGGTAATACACCGAATGGTACGATTAGTGATTTTCAGCGTATATTATCTTTTAGTACTGATTTAGTTACGGCACGTAATATGGTATGTTCATATAATACAAGGGGAGTAGTAGTTGTTATACCACCGGAAGTACAGGGTCTACAGAGTGGTTTATATGTATTAGGACAGCAGTTTGATGTAAATGGTGTAGTGGGTGTAGTTAATTCGTTTAGATTTATGTATAGTGAAACATTTGATAAGGTACAGGGTGGATTTAATCATTATGTATATAAGAACAGTACTGGATTTTATATATCGGGTGCTAATTTACAATTTTTACCGGGAAAAGATGATACAGCGGCATTAAGGCCGATGATTTTACCAACGAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6970440d9cdeb254457f6b4e01733a22463cac2449c3f88d928d73704b1c7ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8288
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50