Protein

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Genbank accession
YP_010755443.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MAREPLVIGPFAGGLNTYDDPTAVKDTELVECLNWDPGLEGSLRSRPPFTDLSHPLTLGASGHTRFLGFFYGTGTSYFLIVSDGLSSTWAFNGATQSWVLITDTFAATAVAQFDNKAWLTSPVGEADPGGYWTPGGGFTADADMPHGDTIVSFKSRLWISPGRGNTNGTRVYYSKVLGQPNFWQTPSFVDVGQGDGQDIVLLTTYYNTLVAFRTQSIWAFSFNADPAQGSVALLVPGVGLTSKECLISYENYLFFMYDEKAYQFINNGAQQINMKVPFTATNQANNTLPMSVSLFNNRAIFHYYDTMYVYSLRTKTWTRWKSPAWGSIGQIMSPAGVLTDEAFANPSKTIPAGGTRTSPLLYIEDRFTNASEVFTCEVQTKNYNYQLSSNFKRLFWWGVDAVFRTRIRGWAVPVVHHAQVTWGQLVSQGVTWGQLLGGTWGSPFIGDLSVHSDYDLGGTGPVRKFVKMFKSMRFRQVYFRLIFDTDGSIGTAPVNLFTITAYVGSKETVSKTVS
Physico‐chemical
properties
protein length:514 AA
molecular weight: 56848,37070 Da
isoelectric point:6,66269
aromaticity:0,14397
hydropathy:-0,11712

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010755443.1
1 514
Domain Start End Length (AA) Confidence
N-terminal 1 398 398 0,6721
Central domain 399 503 106 0,0695
C-terminal 504 514 10 0,9789
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-398
Central
399-503
C-terminal
504-514

Taxonomy

  Name Taxonomy ID Lineage
Phage Microbacterium phage Shocker
[NCBI] 		2805839 Uroviricota > Caudoviricetes > Shockervirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010755443.1 [NCBI]
Genbank nucleotide accession
NC_073470 [NCBI]
CDS location
range 19664 -> 21208
strand +
CDS
ATGGCACGGGAGCCGCTCGTCATCGGACCCTTCGCCGGGGGGCTGAACACCTACGACGACCCCACGGCTGTAAAGGACACCGAGCTGGTTGAGTGCCTCAACTGGGACCCGGGTCTGGAAGGCTCTCTGCGCTCTCGGCCCCCCTTTACAGACCTCTCACACCCGCTGACCCTCGGAGCCTCCGGGCACACCCGGTTCCTCGGTTTCTTCTACGGCACCGGCACCTCCTACTTCCTCATCGTGAGCGACGGCCTGAGCTCGACCTGGGCCTTCAACGGGGCCACGCAGAGCTGGGTGCTCATCACGGACACCTTCGCCGCCACGGCGGTCGCTCAGTTCGACAACAAGGCGTGGCTGACCTCCCCTGTCGGAGAAGCGGACCCGGGAGGGTACTGGACTCCTGGCGGAGGTTTCACGGCGGATGCTGATATGCCTCATGGGGACACCATTGTGTCCTTCAAGAGTCGTCTGTGGATCTCTCCTGGGCGAGGCAACACGAATGGGACTCGGGTCTACTACTCGAAGGTGCTCGGGCAGCCGAACTTCTGGCAGACCCCCTCCTTCGTGGACGTGGGCCAGGGAGACGGTCAGGACATCGTGCTCCTGACCACCTACTACAACACTCTCGTGGCTTTCCGCACTCAGTCGATCTGGGCCTTCAGCTTCAACGCCGATCCTGCCCAGGGTTCGGTGGCTCTGCTTGTCCCTGGAGTTGGGCTCACCTCGAAGGAGTGCCTGATCTCCTACGAGAACTACCTCTTCTTCATGTACGACGAGAAGGCGTACCAGTTCATCAACAACGGGGCGCAGCAGATCAACATGAAGGTGCCCTTTACAGCCACGAACCAGGCGAACAACACGCTGCCGATGAGCGTCTCCCTGTTCAACAACCGAGCGATCTTCCACTACTACGACACGATGTACGTCTACAGCCTCCGGACGAAGACCTGGACGCGCTGGAAGAGCCCTGCCTGGGGCTCGATCGGCCAGATCATGTCCCCCGCGGGTGTGCTGACGGATGAGGCGTTCGCCAATCCCTCGAAGACCATTCCTGCCGGTGGCACACGCACCAGCCCGCTGCTCTACATCGAGGACCGCTTCACCAACGCCTCCGAGGTGTTCACCTGTGAGGTTCAGACGAAGAACTACAACTACCAGCTCAGCTCGAACTTCAAGCGGCTGTTCTGGTGGGGTGTAGACGCGGTGTTCCGTACTCGAATCCGAGGCTGGGCCGTTCCTGTCGTGCACCACGCACAGGTCACATGGGGCCAGCTCGTGAGCCAGGGTGTCACCTGGGGCCAGCTCCTCGGAGGCACCTGGGGCTCCCCGTTCATCGGTGACCTGTCGGTGCACTCCGACTACGACCTCGGAGGTACCGGACCTGTCCGGAAGTTCGTCAAGATGTTCAAGTCGATGCGCTTCCGGCAGGTGTACTTCCGGCTCATTTTCGACACAGACGGCTCGATCGGTACGGCACCTGTCAACCTCTTCACCATCACGGCGTATGTGGGGTCGAAGGAAACCGTGAGCAAGACGGTCTCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
46db10c17fff2d16c0035da09bffab76235fe0b2ed30079c626730a867a87b5d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50